RNA–Protein interactions for RNA: ENST00000563649.1

C16orf62-222, Transcript of UPF0505 protein C16orf62, human

TSL 5

Gene C16orf62, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C16orf62-222	ENST00000563649	APAF1	O14727	1248 aa		10.53	□□□□□ -0.72
C16orf62-222	ENST00000563649	BBOX1	O75936	387 aa		10.53	□□□□□ -0.72
C16orf62-222	ENST00000563649	GNAI1	P63096	354 aa		10.53	□□□□□ -0.72
C16orf62-222	ENST00000563649	KIAA2012	Q0VF49	1180 aa		10.53	□□□□□ -0.72
C16orf62-222	ENST00000563649	TRIM28	Q13263	835 aa	Known RBP	10.53	□□□□□ -0.72
C16orf62-222	ENST00000563649	DPP8	Q6V1X1	898 aa	Predicted RBP	10.53	□□□□□ -0.72
C16orf62-222	ENST00000563649	ANKRD13D	Q6ZTN6	518 aa		10.53	□□□□□ -0.72
C16orf62-222	ENST00000563649	DDX46	Q7L014	1031 aa	Known RBP	10.53	□□□□□ -0.72
C16orf62-222	ENST00000563649	SP8	Q8IXZ3	490 aa		10.53	□□□□□ -0.72
C16orf62-222	ENST00000563649	CENPF	P49454	3210 aa		10.53	□□□□□ -0.72
C16orf62-222	ENST00000563649	TNRC18	O15417	2968 aa	Predicted RBP	10.53	□□□□□ -0.72
C16orf62-222	ENST00000563649	TMEM88B	A6NKF7	163 aa		10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	TCERG1	O14776	1098 aa	Known RBP	10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	LMOD1	P29536	600 aa	Predicted RBP	10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	PSEN1	P49768	467 aa		10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	GOLGA2	Q08379	1002 aa		10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	SF3B3	Q15393	1217 aa	Known RBP	10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	MAP1S	Q66K74	1059 aa	Predicted RBP	10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	SUPT20H	Q8NEM7	779 aa		10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	MKRN1	Q9UHC7	482 aa	Known RBP	10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	ZNRF3	Q9ULT6	936 aa		10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	GJA3	Q9Y6H8	435 aa		10.52	□□□□□ -0.73
C16orf62-222	ENST00000563649	RASSF10	A6NK89	507 aa		10.51	□□□□□ -0.73
C16orf62-222	ENST00000563649	ATP5J2-PTCD1	G3V325	749 aa		10.51	□□□□□ -0.73
C16orf62-222	ENST00000563649	USP50	Q70EL3	339 aa	Predicted RBP	10.51	□□□□□ -0.73
C16orf62-222	ENST00000563649	MPND	Q8N594	471 aa		10.51	□□□□□ -0.73
C16orf62-222	ENST00000563649	FAM89A	Q96GI7	184 aa		10.51	□□□□□ -0.73
C16orf62-222	ENST00000563649	TMX4	Q9H1E5	349 aa	Predicted RBP	10.51	□□□□□ -0.73
C16orf62-222	ENST00000563649	GPRC5D	Q9NZD1	345 aa		10.51	□□□□□ -0.73
C16orf62-222	ENST00000563649	BRCA2	P51587	3418 aa		10.5	□□□□□ -0.73
C16orf62-222	ENST00000563649	EPS15	P42566	896 aa		10.5	□□□□□ -0.73
C16orf62-222	ENST00000563649	IRX5	P78411	483 aa	Predicted RBP	10.5	□□□□□ -0.73
C16orf62-222	ENST00000563649	CXCL9	Q07325	125 aa		10.5	□□□□□ -0.73
C16orf62-222	ENST00000563649	CCDC27	Q2M243	656 aa		10.5	□□□□□ -0.73
C16orf62-222	ENST00000563649	CNTROB	Q8N137	903 aa		10.5	□□□□□ -0.73
C16orf62-222	ENST00000563649	C8orf58	Q8NAV2	365 aa		10.5	□□□□□ -0.73
C16orf62-222	ENST00000563649	CELF1	Q92879	486 aa	Known RBP	10.5	□□□□□ -0.73
C16orf62-222	ENST00000563649	OCEL1	Q9H607	264 aa		10.5	□□□□□ -0.73
C16orf62-222	ENST00000563649	ADARB2	Q9NS39	739 aa	Known RBP	10.5	□□□□□ -0.73
C16orf62-222	ENST00000563649	YDJC	A8MPS7	323 aa		10.49	□□□□□ -0.73
C16orf62-222	ENST00000563649	IRS4	O14654	1257 aa	Predicted RBP	10.49	□□□□□ -0.73
C16orf62-222	ENST00000563649	GMPS	P49915	693 aa	Predicted RBP	10.49	□□□□□ -0.73
C16orf62-222	ENST00000563649	PDAP1	Q13442	181 aa	Known RBP	10.49	□□□□□ -0.73
C16orf62-222	ENST00000563649	CCDC184	Q52MB2	194 aa		10.49	□□□□□ -0.73
C16orf62-222	ENST00000563649	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.49	□□□□□ -0.73
C16orf62-222	ENST00000563649	ZNF428	Q96B54	188 aa		10.49	□□□□□ -0.73
C16orf62-222	ENST00000563649	PHAX	Q9H814	394 aa	Known RBP	10.49	□□□□□ -0.73
C16orf62-222	ENST00000563649	RTL9	Q8NET4	1388 aa		10.49	□□□□□ -0.73
C16orf62-222	ENST00000563649	POLR2A	P24928	1970 aa	Known RBP	10.48	□□□□□ -0.73
C16orf62-222	ENST00000563649	VEGFB	P49765	207 aa		10.48	□□□□□ -0.73
C16orf62-222	ENST00000563649	MKRN3	Q13064	507 aa	Known RBP	10.48	□□□□□ -0.73
C16orf62-222	ENST00000563649	CCDC191	Q8NCU4	936 aa		10.48	□□□□□ -0.73
C16orf62-222	ENST00000563649	IL16	Q14005	1332 aa		10.48	□□□□□ -0.73
C16orf62-222	ENST00000563649	ARAP2	Q8WZ64	1704 aa		10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	PCCA	P05165	728 aa	Predicted RBP	10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	RTL5	Q5HYW3	569 aa	Predicted RBP	10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	CCDC30	Q5VVM6	783 aa		10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	CIAPIN1	Q6FI81	312 aa		10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	RIC3	Q7Z5B4	369 aa		10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	TSPYL6	Q8N831	410 aa		10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	TRPM4	Q8TD43	1214 aa		10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	TSR2	Q969E8	191 aa	Known RBP	10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	MYD88	Q99836	296 aa		10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	CWC25	Q9NXE8	425 aa	Predicted RBP	10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	PODXL2	Q9NZ53	605 aa		10.47	□□□□□ -0.73
C16orf62-222	ENST00000563649	TRAF5	O00463	557 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	ELL2	O00472	640 aa	Predicted RBP	10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	FOXN1	O15353	648 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	RAD17	O75943	681 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	HSP90B1	P14625	803 aa	Known RBP	10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	GPSM2	P81274	684 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	TNIP1	Q15025	636 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	WWC1	Q8IX03	1113 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	TNS4	Q8IZW8	715 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	TBC1D16	Q8TBP0	767 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	METTL22	Q9BUU2	404 aa	Predicted RBP	10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	CHMP4A	Q9BY43	222 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	POLL	Q9UGP5	575 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	PGAP2	Q9UHJ9	254 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	FANCI	Q9NVI1	1328 aa		10.46	□□□□□ -0.73
C16orf62-222	ENST00000563649	ECM29	Q5VYK3	1845 aa		10.46	□□□□□ -0.74
C16orf62-222	ENST00000563649	MKI67	P46013	3256 aa	Known RBP	10.46	□□□□□ -0.74
C16orf62-222	ENST00000563649	SHTN1	A0MZ66	631 aa		10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	ECE2	O60344	883 aa		10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	DDX58	O95786	925 aa	Known RBP	10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	IGKV5-2	P06315	115 aa		10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	CTSW	P56202	376 aa		10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	FMR1	Q06787	632 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	WASHC4	Q2M389	1173 aa		10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	CCDC152	Q4G0S7	254 aa		10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	ZC3H15	Q8WU90	426 aa	Known RBP	10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	WBP1L	Q9NX94	342 aa		10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	ABT1	Q9ULW3	272 aa	Known RBP	10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	MAP3K2	Q9Y2U5	619 aa		10.45	□□□□□ -0.74
C16orf62-222	ENST00000563649	LAMB1	P07942	1786 aa		10.44	□□□□□ -0.74
C16orf62-222	ENST00000563649	PAPPA2	Q9BXP8	1791 aa		10.44	□□□□□ -0.74
C16orf62-222	ENST00000563649	MED23	Q9ULK4	1368 aa		10.44	□□□□□ -0.74
C16orf62-222	ENST00000563649	WDR33	Q9C0J8	1336 aa	Known RBP	10.44	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms