RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 TDRD7Q8NHU6 1098 aaKnown RBP13.84□□□□□ -0.19
ABCA3-203ENST00000563623 TBX22Q9Y458 520 aa13.84□□□□□ -0.19
ABCA3-203ENST00000563623 U3KPZ7 1027 aaPredicted RBP13.84□□□□□ -0.19
ABCA3-203ENST00000563623 AKAP12Q02952 1782 aa13.84□□□□□ -0.19
ABCA3-203ENST00000563623 STK38Q15208 465 aa13.84□□□□□ -0.19
ABCA3-203ENST00000563623 HOMER1Q86YM7 354 aa13.84□□□□□ -0.19
ABCA3-203ENST00000563623 ZNF396Q96N95 335 aaPredicted RBP13.84□□□□□ -0.19
ABCA3-203ENST00000563623 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
ABCA3-203ENST00000563623 PTPDC1A2A3K4 754 aa13.84□□□□□ -0.19
ABCA3-203ENST00000563623 USP27XA6NNY8 438 aa13.84□□□□□ -0.19
ABCA3-203ENST00000563623 ZBTB22O15209 634 aa13.84□□□□□ -0.19
ABCA3-203ENST00000563623 POLR3DP05423 398 aaPredicted RBP13.84□□□□□ -0.19
ABCA3-203ENST00000563623 THEMISQ8N1K5 641 aaPredicted RBP13.84□□□□□ -0.19
ABCA3-203ENST00000563623 AMOTQ4VCS5 1084 aa13.83□□□□□ -0.19
ABCA3-203ENST00000563623 ANKRD24Q8TF21 1146 aa13.83□□□□□ -0.19
ABCA3-203ENST00000563623 ZFP91Q96JP5 570 aaPredicted RBP13.83□□□□□ -0.19
ABCA3-203ENST00000563623 ZSCAN16Q9H4T2 348 aaPredicted RBP13.83□□□□□ -0.19
ABCA3-203ENST00000563623 DDX21Q9NR30 783 aaKnown RBP eCLIP13.83□□□□□ -0.19
ABCA3-203ENST00000563623 DBNLQ9UJU6 430 aaKnown RBP13.83□□□□□ -0.19
ABCA3-203ENST00000563623 PAXBP1Q9Y5B6 917 aa13.83□□□□□ -0.19
ABCA3-203ENST00000563623 PLEKHG1Q9ULL1 1385 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 SCRN1Q12765 414 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 RESTQ13127 1097 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 CERS3Q8IU89 383 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 TTC5Q8N0Z6 440 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 USP28Q96RU2 1077 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 ANO10Q9NW15 660 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.83□□□□□ -0.2
ABCA3-203ENST00000563623 PXDNLA1KZ92 1463 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 A0A087WZG4 1122 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 NRDCO43847 1150 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 CYP21A2P08686 494 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 HAND2P61296 217 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 MCMDC2Q4G0Z9 681 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 RAPGEF4Q8WZA2 1011 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 KAZALD1Q96I82 304 aa13.83□□□□□ -0.2
ABCA3-203ENST00000563623 GTPBP4Q9BZE4 634 aaKnown RBP13.83□□□□□ -0.2
ABCA3-203ENST00000563623 A0A1B0GVL5 298 aa13.82□□□□□ -0.2
ABCA3-203ENST00000563623 PLA2G4DQ86XP0 818 aa13.82□□□□□ -0.2
ABCA3-203ENST00000563623 WASHC4Q2M389 1173 aa13.82□□□□□ -0.2
ABCA3-203ENST00000563623 LRRC8AQ8IWT6 810 aa13.82□□□□□ -0.2
ABCA3-203ENST00000563623 ZNF215Q9UL58 517 aaPredicted RBP13.82□□□□□ -0.2
ABCA3-203ENST00000563623 IGKV5-2P06315 115 aa13.82□□□□□ -0.2
ABCA3-203ENST00000563623 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
ABCA3-203ENST00000563623 TNNI3KQ59H18 835 aa13.82□□□□□ -0.2
ABCA3-203ENST00000563623 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.82□□□□□ -0.2
ABCA3-203ENST00000563623 NAT10Q9H0A0 1025 aaKnown RBP13.82□□□□□ -0.2
ABCA3-203ENST00000563623 FPGT-TNNI3KV9GXZ4 949 aa13.82□□□□□ -0.2
ABCA3-203ENST00000563623 TMC6Q7Z403 805 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 KCNB2Q92953 911 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 SNRKQ9NRH2 765 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 CPLX1O14810 134 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 GCKRQ14397 625 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 ANKRD13DQ6ZTN6 518 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 NFATC2IPQ8NCF5 419 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 NEURL1BA8MQ27 555 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 TIMM10P62072 90 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 FKBP4Q02790 459 aaKnown RBP eCLIP13.81□□□□□ -0.2
ABCA3-203ENST00000563623 KCNH5Q8NCM2 988 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 KIF18AQ8NI77 898 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 ANKRD7Q92527 254 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
ABCA3-203ENST00000563623 OGFRQ9NZT2 677 aa13.81□□□□□ -0.2
ABCA3-203ENST00000563623 SETD1AO15047 1707 aaKnown RBP13.8□□□□□ -0.2
ABCA3-203ENST00000563623 CTAGE5O15320 804 aa13.8□□□□□ -0.2
ABCA3-203ENST00000563623 LMBR1LQ6UX01 489 aa13.8□□□□□ -0.2
ABCA3-203ENST00000563623 FAM177A1Q8N128 213 aaPredicted RBP13.8□□□□□ -0.2
ABCA3-203ENST00000563623 ERICH4A6NGS2 130 aa13.8□□□□□ -0.2
ABCA3-203ENST00000563623 ELF2Q15723 593 aa13.8□□□□□ -0.2
ABCA3-203ENST00000563623 SYNE3Q6ZMZ3 975 aa13.8□□□□□ -0.2
ABCA3-203ENST00000563623 GOLPH3LQ9H4A5 285 aa13.8□□□□□ -0.2
ABCA3-203ENST00000563623 TPM4P67936 248 aa13.79□□□□□ -0.2
ABCA3-203ENST00000563623 DHX32Q7L7V1 743 aaKnown RBP13.79□□□□□ -0.2
ABCA3-203ENST00000563623 XRN1Q8IZH2 1706 aaKnown RBP13.79□□□□□ -0.2
ABCA3-203ENST00000563623 GCP02774 474 aa13.79□□□□□ -0.2
ABCA3-203ENST00000563623 UTP14CQ5TAP6 766 aaKnown RBP13.79□□□□□ -0.2
ABCA3-203ENST00000563623 FEZ1Q99689 392 aa13.79□□□□□ -0.2
ABCA3-203ENST00000563623 CEMIPQ8WUJ3 1361 aa13.79□□□□□ -0.2
ABCA3-203ENST00000563623 CTIFO43310 598 aaKnown RBP13.79□□□□□ -0.2
ABCA3-203ENST00000563623 HSP90AB3PQ58FF7 597 aa13.79□□□□□ -0.2
ABCA3-203ENST00000563623 STK11IPQ8N1F8 1099 aa13.79□□□□□ -0.2
ABCA3-203ENST00000563623 ATP5JP18859 108 aa13.78□□□□□ -0.2
ABCA3-203ENST00000563623 IFNKQ9P0W0 207 aa13.78□□□□□ -0.2
ABCA3-203ENST00000563623 CAVIN2O95810 425 aa13.78□□□□□ -0.2
ABCA3-203ENST00000563623 FAM160A1Q05DH4 1040 aa13.78□□□□□ -0.2
ABCA3-203ENST00000563623 TTLL5Q6EMB2 1281 aa13.78□□□□□ -0.2
ABCA3-203ENST00000563623 NSUN7Q8NE18 718 aaKnown RBP13.78□□□□□ -0.2
ABCA3-203ENST00000563623 TMEM51Q9NW97 253 aa13.78□□□□□ -0.2
ABCA3-203ENST00000563623 A0A0G2JLW4 131 aa13.78□□□□□ -0.2
ABCA3-203ENST00000563623 SNW1Q13573 536 aaKnown RBP13.78□□□□□ -0.2
ABCA3-203ENST00000563623 MRPS27Q92552 414 aaKnown RBP13.78□□□□□ -0.2
ABCA3-203ENST00000563623 GPHNQ9NQX3 736 aaPredicted RBP13.78□□□□□ -0.2
ABCA3-203ENST00000563623 LMOD1P29536 600 aaPredicted RBP13.77□□□□□ -0.2
ABCA3-203ENST00000563623 ZNF790Q6PG37 636 aa13.77□□□□□ -0.2
ABCA3-203ENST00000563623 STOX1Q6ZVD7 989 aa13.77□□□□□ -0.2
ABCA3-203ENST00000563623 FAM208AQ9UK61 1670 aaKnown RBP13.77□□□□□ -0.2
ABCA3-203ENST00000563623 AGLP35573 1532 aa13.77□□□□□ -0.2
ABCA3-203ENST00000563623 NEMFO60524 1076 aa13.77□□□□□ -0.21
ABCA3-203ENST00000563623 SFPQP23246 707 aaKnown RBP eCLIP13.77□□□□□ -0.21
ABCA3-203ENST00000563623 IQCB1Q15051 598 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms