RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 EVI5LQ96CN4 794 aa16.87■□□□□ 0.29
SMPD3-205ENST00000563455 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
SMPD3-205ENST00000563455 BRIP1Q9BX63 1249 aa16.87■□□□□ 0.29
SMPD3-205ENST00000563455 BCL2L12Q9HB09 334 aa16.87■□□□□ 0.29
SMPD3-205ENST00000563455 TBC1D2BQ9UPU7 963 aa16.87■□□□□ 0.29
SMPD3-205ENST00000563455 PA2G4Q9UQ80 394 aaKnown RBP16.87■□□□□ 0.29
SMPD3-205ENST00000563455 TRIM6-TRIM34B2RNG4 842 aa16.86■□□□□ 0.29
SMPD3-205ENST00000563455 IRS4O14654 1257 aaPredicted RBP16.86■□□□□ 0.29
SMPD3-205ENST00000563455 ERICH6Q7L0X2 663 aa16.86■□□□□ 0.29
SMPD3-205ENST00000563455 NYXQ9GZU5 481 aa16.86■□□□□ 0.29
SMPD3-205ENST00000563455 CEP126Q9P2H0 1117 aa16.86■□□□□ 0.29
SMPD3-205ENST00000563455 CHMP3Q9Y3E7 222 aa16.86■□□□□ 0.29
SMPD3-205ENST00000563455 ANKRD18BA2A2Z9 1011 aa16.85■□□□□ 0.29
SMPD3-205ENST00000563455 LMNB1P20700 586 aa16.85■□□□□ 0.29
SMPD3-205ENST00000563455 MCCP23508 829 aa16.85■□□□□ 0.29
SMPD3-205ENST00000563455 CTSWP56202 376 aa16.85■□□□□ 0.29
SMPD3-205ENST00000563455 TAF7LQ5H9L4 462 aa16.85■□□□□ 0.29
SMPD3-205ENST00000563455 NUTM1Q86Y26 1132 aa16.85■□□□□ 0.29
SMPD3-205ENST00000563455 RBM46Q8TBY0 533 aaKnown RBP16.85■□□□□ 0.29
SMPD3-205ENST00000563455 FAM89AQ96GI7 184 aa16.85■□□□□ 0.29
SMPD3-205ENST00000563455 RTL9Q8NET4 1388 aa16.85■□□□□ 0.29
SMPD3-205ENST00000563455 ATP5JP18859 108 aa16.84■□□□□ 0.29
SMPD3-205ENST00000563455 FSTL1Q12841 308 aa16.84■□□□□ 0.29
SMPD3-205ENST00000563455 LRRFIP1Q32MZ4 808 aaKnown RBP16.84■□□□□ 0.29
SMPD3-205ENST00000563455 TNNI3KQ59H18 835 aa16.84■□□□□ 0.29
SMPD3-205ENST00000563455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMPD3-205ENST00000563455 FPGT-TNNI3KV9GXZ4 949 aa16.84■□□□□ 0.29
SMPD3-205ENST00000563455 ST5P78524 1137 aa16.83■□□□□ 0.28
SMPD3-205ENST00000563455 RFX7Q2KHR2 1363 aa16.83■□□□□ 0.28
SMPD3-205ENST00000563455 CCDC152Q4G0S7 254 aa16.83■□□□□ 0.28
SMPD3-205ENST00000563455 TBC1D9BQ66K14 1250 aa16.83■□□□□ 0.28
SMPD3-205ENST00000563455 DPY19L2Q6NUT2 758 aa16.83■□□□□ 0.28
SMPD3-205ENST00000563455 CARMIL3Q8ND23 1372 aa16.83■□□□□ 0.28
SMPD3-205ENST00000563455 TTLL11Q8NHH1 800 aa16.83■□□□□ 0.28
SMPD3-205ENST00000563455 ZNF622Q969S3 477 aaKnown RBP eCLIP16.83■□□□□ 0.28
SMPD3-205ENST00000563455 RILPL2Q969X0 211 aa16.83■□□□□ 0.28
SMPD3-205ENST00000563455 EAF2Q96CJ1 260 aaPredicted RBP16.83■□□□□ 0.28
SMPD3-205ENST00000563455 SIL1Q9H173 461 aa16.83■□□□□ 0.28
SMPD3-205ENST00000563455 NMRK2Q9NPI5 230 aa16.83■□□□□ 0.28
SMPD3-205ENST00000563455 NIP7Q9Y221 180 aaKnown RBP eCLIP16.83■□□□□ 0.28
SMPD3-205ENST00000563455 GPTP24298 496 aa16.82■□□□□ 0.28
SMPD3-205ENST00000563455 CHMLP26374 656 aa16.82■□□□□ 0.28
SMPD3-205ENST00000563455 SOGA3Q5TF21 947 aa16.82■□□□□ 0.28
SMPD3-205ENST00000563455 CNBD1Q8NA66 436 aa16.82■□□□□ 0.28
SMPD3-205ENST00000563455 CNKSR1Q969H4 720 aa16.82■□□□□ 0.28
SMPD3-205ENST00000563455 ANKRD36CQ5JPF3 1778 aa16.82■□□□□ 0.28
SMPD3-205ENST00000563455 ANAPC15P60006 121 aa16.81■□□□□ 0.28
SMPD3-205ENST00000563455 TFCP2Q12800 502 aa16.81■□□□□ 0.28
SMPD3-205ENST00000563455 SLC10A5Q5PT55 438 aa16.81■□□□□ 0.28
SMPD3-205ENST00000563455 ATG9AQ7Z3C6 839 aa16.81■□□□□ 0.28
SMPD3-205ENST00000563455 SNX21Q969T3 373 aa16.81■□□□□ 0.28
SMPD3-205ENST00000563455 USP26Q9BXU7 913 aa16.81■□□□□ 0.28
SMPD3-205ENST00000563455 ABCC12Q96J65 1359 aa16.8■□□□□ 0.28
SMPD3-205ENST00000563455 RAD50Q92878 1312 aa16.8■□□□□ 0.28
SMPD3-205ENST00000563455 VEGFAP15692 232 aaPredicted RBP16.8■□□□□ 0.28
SMPD3-205ENST00000563455 TPTE2Q6XPS3 522 aa16.8■□□□□ 0.28
SMPD3-205ENST00000563455 ESYT1Q9BSJ8 1104 aa16.8■□□□□ 0.28
SMPD3-205ENST00000563455 RRAGCQ9HB90 399 aa16.8■□□□□ 0.28
SMPD3-205ENST00000563455 KIAA1551Q9HCM1 1747 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 UBN2Q6ZU65 1347 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 MROH5Q6ZUA9 1318 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 GLTPD2A6NH11 291 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 ITGA6P23229 1130 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 RABEP1Q15276 862 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 CCDC158Q5M9N0 1113 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 SUSD4Q5VX71 490 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 STYK1Q6J9G0 422 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 PRR5LQ6MZQ0 368 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 LDHAL6AQ6ZMR3 332 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 JARID2Q92833 1246 aaPredicted RBP16.79■□□□□ 0.28
SMPD3-205ENST00000563455 BCL11AQ9H165 835 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 DIAPH3Q9NSV4 1193 aa16.79■□□□□ 0.28
SMPD3-205ENST00000563455 NTSR2O95665 410 aa16.78■□□□□ 0.28
SMPD3-205ENST00000563455 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
SMPD3-205ENST00000563455 NBPF5PQ86XG9 351 aaPredicted RBP16.78■□□□□ 0.28
SMPD3-205ENST00000563455 SMC1BQ8NDV3 1235 aa16.78■□□□□ 0.28
SMPD3-205ENST00000563455 ZNF512BQ96KM6 892 aaPredicted RBP16.78■□□□□ 0.28
SMPD3-205ENST00000563455 CDC5LQ99459 802 aaKnown RBP16.78■□□□□ 0.28
SMPD3-205ENST00000563455 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
SMPD3-205ENST00000563455 KLHDC4Q8TBB5 520 aa16.77■□□□□ 0.28
SMPD3-205ENST00000563455 IL17RAQ96F46 866 aa16.77■□□□□ 0.28
SMPD3-205ENST00000563455 MASTLQ96GX5 879 aa16.77■□□□□ 0.28
SMPD3-205ENST00000563455 CCDC8Q9H0W5 538 aaPredicted RBP16.77■□□□□ 0.28
SMPD3-205ENST00000563455 NUP98P52948 1817 aa16.77■□□□□ 0.27
SMPD3-205ENST00000563455 ARFGEF1Q9Y6D6 1849 aa16.76■□□□□ 0.27
SMPD3-205ENST00000563455 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
SMPD3-205ENST00000563455 IGHMBP2P38935 993 aaKnown RBP16.76■□□□□ 0.27
SMPD3-205ENST00000563455 HAUS7Q99871 368 aa16.76■□□□□ 0.27
SMPD3-205ENST00000563455 CNNM1Q9NRU3 951 aa16.76■□□□□ 0.27
SMPD3-205ENST00000563455 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
SMPD3-205ENST00000563455 RIPOR2Q9Y4F9 1068 aa16.76■□□□□ 0.27
SMPD3-205ENST00000563455 SGSM2O43147 1006 aa16.75■□□□□ 0.27
SMPD3-205ENST00000563455 C21orf2O43822 256 aa16.75■□□□□ 0.27
SMPD3-205ENST00000563455 RASSF7Q02833 373 aa16.75■□□□□ 0.27
SMPD3-205ENST00000563455 GORABQ5T7V8 394 aa16.75■□□□□ 0.27
SMPD3-205ENST00000563455 HSCBQ8IWL3 235 aa16.75■□□□□ 0.27
SMPD3-205ENST00000563455 MPHOSPH8Q99549 860 aa16.75■□□□□ 0.27
SMPD3-205ENST00000563455 GREM2Q9H772 168 aa16.75■□□□□ 0.27
SMPD3-205ENST00000563455 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms