RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 BSDC1Q9NW68 430 aaPredicted RBP16.03■□□□□ 0.16
PKM-208ENST00000563275 PGAP2Q9UHJ9 254 aa16.03■□□□□ 0.16
PKM-208ENST00000563275 MYH3P11055 1940 aa16.03■□□□□ 0.16
PKM-208ENST00000563275 ZNF609O15014 1411 aa16.02■□□□□ 0.16
PKM-208ENST00000563275 PCNTO95613 3336 aa16.02■□□□□ 0.16
PKM-208ENST00000563275 XDHP47989 1333 aa16.02■□□□□ 0.16
PKM-208ENST00000563275 F6X3S4 739 aa16.02■□□□□ 0.16
PKM-208ENST00000563275 GPR101Q96P66 508 aaPredicted RBP16.02■□□□□ 0.16
PKM-208ENST00000563275 DBNDD1Q9H9R9 158 aa16.02■□□□□ 0.16
PKM-208ENST00000563275 ECE2O60344 883 aa16.01■□□□□ 0.15
PKM-208ENST00000563275 UFL1O94874 794 aa16.01■□□□□ 0.15
PKM-208ENST00000563275 DPF2Q92785 391 aa16.01■□□□□ 0.15
PKM-208ENST00000563275 GGA1Q9UJY5 639 aa16.01■□□□□ 0.15
PKM-208ENST00000563275 MINPP1Q9UNW1 487 aa16.01■□□□□ 0.15
PKM-208ENST00000563275 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
PKM-208ENST00000563275 CNTNAP1P78357 1384 aa16■□□□□ 0.15
PKM-208ENST00000563275 SCN9AQ15858 1988 aa16■□□□□ 0.15
PKM-208ENST00000563275 TMEM88BA6NKF7 163 aa16■□□□□ 0.15
PKM-208ENST00000563275 E9PSI1 815 aa16■□□□□ 0.15
PKM-208ENST00000563275 PSMD14O00487 310 aa16■□□□□ 0.15
PKM-208ENST00000563275 RIMBP2O15034 1052 aa16■□□□□ 0.15
PKM-208ENST00000563275 HIRAP54198 1017 aaPredicted RBP16■□□□□ 0.15
PKM-208ENST00000563275 SLFN5Q08AF3 891 aa16■□□□□ 0.15
PKM-208ENST00000563275 FAM161AQ3B820 660 aa16■□□□□ 0.15
PKM-208ENST00000563275 TRMT2AQ8IZ69 625 aaKnown RBP16■□□□□ 0.15
PKM-208ENST00000563275 KCNQ5Q9NR82 932 aa16■□□□□ 0.15
PKM-208ENST00000563275 ANKIB1Q9P2G1 1089 aa16■□□□□ 0.15
PKM-208ENST00000563275 SHTN1A0MZ66 631 aa15.99■□□□□ 0.15
PKM-208ENST00000563275 WTIPA6NIX2 430 aaPredicted RBP15.99■□□□□ 0.15
PKM-208ENST00000563275 ATP2B4P23634 1241 aa15.99■□□□□ 0.15
PKM-208ENST00000563275 RPS12P25398 132 aaKnown RBP15.99■□□□□ 0.15
PKM-208ENST00000563275 FOXO4P98177 505 aa15.99■□□□□ 0.15
PKM-208ENST00000563275 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
PKM-208ENST00000563275 ZC3H12CQ9C0D7 883 aaKnown RBP15.99■□□□□ 0.15
PKM-208ENST00000563275 ZBTB12Q9Y330 459 aaPredicted RBP15.99■□□□□ 0.15
PKM-208ENST00000563275 ALDH1L1O75891 902 aa15.98■□□□□ 0.15
PKM-208ENST00000563275 VIL1P09327 827 aaKnown RBP15.98■□□□□ 0.15
PKM-208ENST00000563275 ITGA6P23229 1130 aa15.98■□□□□ 0.15
PKM-208ENST00000563275 MICALL2Q8IY33 904 aa15.98■□□□□ 0.15
PKM-208ENST00000563275 MRPL50Q8N5N7 158 aaKnown RBP15.98■□□□□ 0.15
PKM-208ENST00000563275 TRPM4Q8TD43 1214 aa15.98■□□□□ 0.15
PKM-208ENST00000563275 ZC3H15Q8WU90 426 aaKnown RBP15.98■□□□□ 0.15
PKM-208ENST00000563275 CNOT7Q9UIV1 285 aaKnown RBP15.98■□□□□ 0.15
PKM-208ENST00000563275 MED23Q9ULK4 1368 aa15.98■□□□□ 0.15
PKM-208ENST00000563275 GRM8O00222 908 aa15.97■□□□□ 0.15
PKM-208ENST00000563275 BCL2L13Q9BXK5 485 aa15.97■□□□□ 0.15
PKM-208ENST00000563275 UTYO14607 1347 aa15.96■□□□□ 0.15
PKM-208ENST00000563275 RASSF10A6NK89 507 aa15.96■□□□□ 0.15
PKM-208ENST00000563275 EGFRP00533 1210 aa15.96■□□□□ 0.15
PKM-208ENST00000563275 FMR1Q06787 632 aaKnown RBP eCLIP15.96■□□□□ 0.154e-10■□□□□ 8.8
PKM-208ENST00000563275 EPHA10Q5JZY3 1008 aa15.96■□□□□ 0.15
PKM-208ENST00000563275 CST9Q5W186 159 aa15.96■□□□□ 0.15
PKM-208ENST00000563275 CDCA7LQ96GN5 454 aa15.96■□□□□ 0.15
PKM-208ENST00000563275 GMLQ99445 158 aa15.96■□□□□ 0.15
PKM-208ENST00000563275 PSME4Q14997 1843 aa15.96■□□□□ 0.14
PKM-208ENST00000563275 IRS2Q9Y4H2 1338 aa15.95■□□□□ 0.14
PKM-208ENST00000563275 TRAF5O00463 557 aa15.95■□□□□ 0.14
PKM-208ENST00000563275 IGHMBP2P38935 993 aaKnown RBP15.95■□□□□ 0.14
PKM-208ENST00000563275 CCT4P50991 539 aaKnown RBP15.95■□□□□ 0.14
PKM-208ENST00000563275 PODNQ7Z5L7 613 aa15.95■□□□□ 0.14
PKM-208ENST00000563275 SSH1Q8WYL5 1049 aa15.95■□□□□ 0.14
PKM-208ENST00000563275 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
PKM-208ENST00000563275 LEMD3Q9Y2U8 911 aa15.95■□□□□ 0.14
PKM-208ENST00000563275 PTPRCP08575 1304 aa15.94■□□□□ 0.14
PKM-208ENST00000563275 SPEF2Q9C093 1822 aa15.94■□□□□ 0.14
PKM-208ENST00000563275 H7C1D1 291 aa15.94■□□□□ 0.14
PKM-208ENST00000563275 ZNF280AP59817 542 aaPredicted RBP15.94■□□□□ 0.14
PKM-208ENST00000563275 KAZALD1Q96I82 304 aa15.94■□□□□ 0.14
PKM-208ENST00000563275 ZNF646O15015 1829 aaPredicted RBP15.94■□□□□ 0.14
PKM-208ENST00000563275 VEGFBP49765 207 aa15.93■□□□□ 0.14
PKM-208ENST00000563275 RSBN1LQ6PCB5 846 aaPredicted RBP15.93■□□□□ 0.14
PKM-208ENST00000563275 SAMD7Q7Z3H4 446 aa15.93■□□□□ 0.14
PKM-208ENST00000563275 TXNRD3Q86VQ6 643 aa15.93■□□□□ 0.14
PKM-208ENST00000563275 AGBL3Q8NEM8 1001 aa15.93■□□□□ 0.14
PKM-208ENST00000563275 SRCIN1Q9C0H9 1055 aa15.93■□□□□ 0.14
PKM-208ENST00000563275 ANKRD2Q9GZV1 360 aa15.93■□□□□ 0.14
PKM-208ENST00000563275 ANKRD18BA2A2Z9 1011 aa15.92■□□□□ 0.14
PKM-208ENST00000563275 KLRK1P26718 216 aa15.92■□□□□ 0.14
PKM-208ENST00000563275 CHRNDQ07001 517 aa15.92■□□□□ 0.14
PKM-208ENST00000563275 IFIT5Q13325 482 aaKnown RBP15.92■□□□□ 0.14
PKM-208ENST00000563275 ALDH1L2Q3SY69 923 aa15.92■□□□□ 0.14
PKM-208ENST00000563275 LMBR1LQ6UX01 489 aa15.92■□□□□ 0.14
PKM-208ENST00000563275 C15orf52Q6ZUT6 534 aaKnown RBP15.92■□□□□ 0.14
PKM-208ENST00000563275 MPHOSPH8Q99549 860 aa15.92■□□□□ 0.14
PKM-208ENST00000563275 GLIS2Q9BZE0 524 aaPredicted RBP15.92■□□□□ 0.14
PKM-208ENST00000563275 COA1Q9GZY4 146 aa15.92■□□□□ 0.14
PKM-208ENST00000563275 ZNF804BA4D1E1 1349 aa15.92■□□□□ 0.14
PKM-208ENST00000563275 USP17L3A6NCW0 530 aa15.91■□□□□ 0.14
PKM-208ENST00000563275 USP17L4A6NCW7 530 aa15.91■□□□□ 0.14
PKM-208ENST00000563275 CT47B1P0C2W7 299 aaPredicted RBP15.91■□□□□ 0.14
PKM-208ENST00000563275 NBPF7P0C2Y1 421 aaPredicted RBP15.91■□□□□ 0.14
PKM-208ENST00000563275 HSPA1AP0DMV8 641 aaKnown RBP15.91■□□□□ 0.14
PKM-208ENST00000563275 HSPA1BP0DMV9 641 aaKnown RBP15.91■□□□□ 0.14
PKM-208ENST00000563275 RABL6Q3YEC7 729 aaPredicted RBP15.91■□□□□ 0.14
PKM-208ENST00000563275 DACT2Q5SW24 774 aa15.91■□□□□ 0.14
PKM-208ENST00000563275 SLC4A10Q6U841 1118 aa15.91■□□□□ 0.14
PKM-208ENST00000563275 CDC37L1Q7L3B6 337 aa15.91■□□□□ 0.14
PKM-208ENST00000563275 USP17L1Q7RTZ2 530 aa15.91■□□□□ 0.14
PKM-208ENST00000563275 TRPM7Q96QT4 1865 aa15.91■□□□□ 0.14
PKM-208ENST00000563275 THSD7BQ9C0I4 1608 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms