RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 PDE6BP35913 854 aa18.26■□□□□ 0.51
CDH11-207ENST00000563255 RASSF7Q02833 373 aa18.26■□□□□ 0.51
CDH11-207ENST00000563255 CCDC85AQ96PX6 553 aaPredicted RBP18.26■□□□□ 0.51
CDH11-207ENST00000563255 PA2G4Q9UQ80 394 aaKnown RBP18.26■□□□□ 0.51
CDH11-207ENST00000563255 EXOC6BQ9Y2D4 811 aa18.26■□□□□ 0.51
CDH11-207ENST00000563255 CIAO1O76071 339 aa18.25■□□□□ 0.51
CDH11-207ENST00000563255 G3BP1Q13283 466 aaKnown RBP eCLIP18.25■□□□□ 0.51
CDH11-207ENST00000563255 ERC1Q8IUD2 1116 aa18.25■□□□□ 0.51
CDH11-207ENST00000563255 KLHDC4Q8TBB5 520 aa18.25■□□□□ 0.51
CDH11-207ENST00000563255 CDC5LQ99459 802 aaKnown RBP18.25■□□□□ 0.51
CDH11-207ENST00000563255 PDZRN3Q9UPQ7 1066 aa18.25■□□□□ 0.51
CDH11-207ENST00000563255 NUCB1Q02818 461 aa18.24■□□□□ 0.51
CDH11-207ENST00000563255 FSTL1Q12841 308 aa18.24■□□□□ 0.51
CDH11-207ENST00000563255 TAF7LQ5H9L4 462 aa18.24■□□□□ 0.51
CDH11-207ENST00000563255 KLRG1Q96E93 195 aa18.24■□□□□ 0.51
CDH11-207ENST00000563255 ZNF594Q96JF6 807 aaPredicted RBP18.24■□□□□ 0.51
CDH11-207ENST00000563255 SEC31BQ9NQW1 1179 aa18.24■□□□□ 0.51
CDH11-207ENST00000563255 COL4A1P02462 1669 aa18.24■□□□□ 0.51
CDH11-207ENST00000563255 EYA2O00167 538 aa18.23■□□□□ 0.51
CDH11-207ENST00000563255 LMNB1P20700 586 aa18.23■□□□□ 0.51
CDH11-207ENST00000563255 HOXA10P31260 410 aaPredicted RBP18.23■□□□□ 0.51
CDH11-207ENST00000563255 DDX46Q7L014 1031 aaKnown RBP18.23■□□□□ 0.51
CDH11-207ENST00000563255 KIF1BPQ96EK5 621 aa18.23■□□□□ 0.51
CDH11-207ENST00000563255 LRRCC1Q9C099 1032 aa18.23■□□□□ 0.51
CDH11-207ENST00000563255 IGHMBP2P38935 993 aaKnown RBP18.22■□□□□ 0.51
CDH11-207ENST00000563255 IL15P40933 162 aaPredicted RBP18.22■□□□□ 0.51
CDH11-207ENST00000563255 ANKRD45Q5TZF3 282 aa18.22■□□□□ 0.51
CDH11-207ENST00000563255 LDHAL6AQ6ZMR3 332 aa18.22■□□□□ 0.51
CDH11-207ENST00000563255 ATG9AQ7Z3C6 839 aa18.22■□□□□ 0.51
CDH11-207ENST00000563255 RHPN1Q8TCX5 695 aa18.22■□□□□ 0.51
CDH11-207ENST00000563255 RPGRQ92834 1020 aaKnown RBP18.22■□□□□ 0.51
CDH11-207ENST00000563255 ZNF622Q969S3 477 aaKnown RBP eCLIP18.22■□□□□ 0.51
CDH11-207ENST00000563255 RBM17Q96I25 401 aaKnown RBP18.22■□□□□ 0.51
CDH11-207ENST00000563255 SIL1Q9H173 461 aa18.22■□□□□ 0.51
CDH11-207ENST00000563255 SBF1O95248 1867 aa18.22■□□□□ 0.51
CDH11-207ENST00000563255 LRRC37AA6NMS7 1700 aa18.21■□□□□ 0.51
CDH11-207ENST00000563255 SASH1O94885 1247 aa18.21■□□□□ 0.51
CDH11-207ENST00000563255 PRELPP51888 382 aa18.21■□□□□ 0.51
CDH11-207ENST00000563255 OS9Q13438 667 aaPredicted RBP18.21■□□□□ 0.51
CDH11-207ENST00000563255 CHD1LQ86WJ1 897 aa18.21■□□□□ 0.51
CDH11-207ENST00000563255 ANKRD18AQ8IVF6 992 aa18.21■□□□□ 0.51
CDH11-207ENST00000563255 CRAMP1Q96RY5 1269 aa18.21■□□□□ 0.51
CDH11-207ENST00000563255 MPHOSPH8Q99549 860 aa18.21■□□□□ 0.51
CDH11-207ENST00000563255 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
CDH11-207ENST00000563255 ZBTB47Q9UFB7 747 aaPredicted RBP18.21■□□□□ 0.51
CDH11-207ENST00000563255 RIPOR2Q9Y4F9 1068 aa18.21■□□□□ 0.51
CDH11-207ENST00000563255 ARAP2Q8WZ64 1704 aa18.2■□□□□ 0.5
CDH11-207ENST00000563255 SRGNP10124 158 aa18.2■□□□□ 0.5
CDH11-207ENST00000563255 NPR1P16066 1061 aa18.2■□□□□ 0.5
CDH11-207ENST00000563255 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
CDH11-207ENST00000563255 GRAPQ13588 217 aa18.2■□□□□ 0.5
CDH11-207ENST00000563255 LRRC24Q50LG9 513 aa18.2■□□□□ 0.5
CDH11-207ENST00000563255 GRAPLQ8TC17 118 aaPredicted RBP18.2■□□□□ 0.5
CDH11-207ENST00000563255 PUS3Q9BZE2 481 aaKnown RBP18.2■□□□□ 0.5
CDH11-207ENST00000563255 ZC3H4Q9UPT8 1303 aaKnown RBP18.2■□□□□ 0.5
CDH11-207ENST00000563255 GLTPD2A6NH11 291 aa18.19■□□□□ 0.5
CDH11-207ENST00000563255 SMC1BQ8NDV3 1235 aa18.19■□□□□ 0.5
CDH11-207ENST00000563255 CELF1Q92879 486 aaKnown RBP18.19■□□□□ 0.5
CDH11-207ENST00000563255 MASTLQ96GX5 879 aa18.19■□□□□ 0.5
CDH11-207ENST00000563255 CNNM1Q9NRU3 951 aa18.19■□□□□ 0.5
CDH11-207ENST00000563255 BSDC1Q9NW68 430 aaPredicted RBP18.19■□□□□ 0.5
CDH11-207ENST00000563255 MROH5Q6ZUA9 1318 aa18.19■□□□□ 0.5
CDH11-207ENST00000563255 APBB1O00213 710 aa18.18■□□□□ 0.5
CDH11-207ENST00000563255 NFKBIEO00221 500 aa18.18■□□□□ 0.5
CDH11-207ENST00000563255 VEGFAP15692 232 aaPredicted RBP18.18■□□□□ 0.5
CDH11-207ENST00000563255 ALDH1B1P30837 517 aa18.18■□□□□ 0.5
CDH11-207ENST00000563255 TNS4Q8IZW8 715 aa18.18■□□□□ 0.5
CDH11-207ENST00000563255 SLX4Q8IY92 1834 aa18.18■□□□□ 0.5
CDH11-207ENST00000563255 C21orf2O43822 256 aa18.17■□□□□ 0.5
CDH11-207ENST00000563255 SMARCA5O60264 1052 aaPredicted RBP18.17■□□□□ 0.5
CDH11-207ENST00000563255 BBOX1O75936 387 aa18.17■□□□□ 0.5
CDH11-207ENST00000563255 STYK1Q6J9G0 422 aa18.17■□□□□ 0.5
CDH11-207ENST00000563255 LNPKQ9C0E8 428 aa18.17■□□□□ 0.5
CDH11-207ENST00000563255 GPR108Q9NPR9 543 aa18.17■□□□□ 0.5
CDH11-207ENST00000563255 CEP126Q9P2H0 1117 aa18.17■□□□□ 0.5
CDH11-207ENST00000563255 CCDC88AQ3V6T2 1871 aa18.16■□□□□ 0.5
CDH11-207ENST00000563255 TFCP2Q12800 502 aa18.16■□□□□ 0.5
CDH11-207ENST00000563255 TMC4Q7Z404 712 aa18.16■□□□□ 0.5
CDH11-207ENST00000563255 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
CDH11-207ENST00000563255 LTBP1Q14766 1721 aa18.15■□□□□ 0.5
CDH11-207ENST00000563255 DPY19L2Q6NUT2 758 aa18.15■□□□□ 0.5
CDH11-207ENST00000563255 VGLL2Q8N8G2 317 aa18.15■□□□□ 0.5
CDH11-207ENST00000563255 JMYQ8N9B5 988 aa18.15■□□□□ 0.5
CDH11-207ENST00000563255 IL1RAPL2Q9NP60 686 aa18.15■□□□□ 0.5
CDH11-207ENST00000563255 TIAM2Q8IVF5 1701 aa18.15■□□□□ 0.5
CDH11-207ENST00000563255 AK9Q5TCS8 1911 aa18.14■□□□□ 0.49
CDH11-207ENST00000563255 PDE8BO95263 885 aa18.14■□□□□ 0.49
CDH11-207ENST00000563255 PDE4AP27815 886 aa18.14■□□□□ 0.49
CDH11-207ENST00000563255 METTL24Q5JXM2 366 aa18.14■□□□□ 0.49
CDH11-207ENST00000563255 CNKSR1Q969H4 720 aa18.14■□□□□ 0.49
CDH11-207ENST00000563255 MINPP1Q9UNW1 487 aa18.14■□□□□ 0.49
CDH11-207ENST00000563255 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.49
CDH11-207ENST00000563255 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.14■□□□□ 0.49
CDH11-207ENST00000563255 CHRNDQ07001 517 aa18.13■□□□□ 0.49
CDH11-207ENST00000563255 TNNI3KQ59H18 835 aa18.13■□□□□ 0.49
CDH11-207ENST00000563255 EAF2Q96CJ1 260 aaPredicted RBP18.13■□□□□ 0.49
CDH11-207ENST00000563255 FPGT-TNNI3KV9GXZ4 949 aa18.13■□□□□ 0.49
CDH11-207ENST00000563255 ZNF609O15014 1411 aa18.13■□□□□ 0.49
CDH11-207ENST00000563255 MYH13Q9UKX3 1938 aa18.12■□□□□ 0.49
CDH11-207ENST00000563255 SP8Q8IXZ3 490 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms