RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 J3QW42 95 aa5.99□□□□□ -1.45
SHCBP1-202ENST00000563219 TNFRSF10BO14763 440 aa5.99□□□□□ -1.45
SHCBP1-202ENST00000563219 H2AFB1P0C5Y9 115 aa5.99□□□□□ -1.45
SHCBP1-202ENST00000563219 H2AFB2P0C5Z0 115 aa5.99□□□□□ -1.45
SHCBP1-202ENST00000563219 HOXD8P13378 290 aaPredicted RBP5.99□□□□□ -1.45
SHCBP1-202ENST00000563219 EIF2AK2P19525 551 aaKnown RBP5.99□□□□□ -1.45
SHCBP1-202ENST00000563219 SOX18P35713 384 aa5.99□□□□□ -1.45
SHCBP1-202ENST00000563219 KCNA1Q09470 495 aa5.99□□□□□ -1.45
SHCBP1-202ENST00000563219 NAA30Q147X3 362 aaPredicted RBP5.99□□□□□ -1.45
SHCBP1-202ENST00000563219 FAM26DQ5JW98 314 aa5.99□□□□□ -1.45
SHCBP1-202ENST00000563219 NLRP13Q86W25 1043 aa5.99□□□□□ -1.45
SHCBP1-202ENST00000563219 ZMYM1Q5SVZ6 1142 aa5.98□□□□□ -1.45
SHCBP1-202ENST00000563219 IGF2-ASQ6U949 168 aa5.98□□□□□ -1.45
SHCBP1-202ENST00000563219 PIK3R5Q8WYR1 880 aa5.98□□□□□ -1.45
SHCBP1-202ENST00000563219 PLD4Q96BZ4 506 aa5.98□□□□□ -1.45
SHCBP1-202ENST00000563219 MKNK1Q9BUB5 465 aa5.98□□□□□ -1.45
SHCBP1-202ENST00000563219 SSBP4Q9BWG4 385 aaPredicted RBP5.98□□□□□ -1.45
SHCBP1-202ENST00000563219 FAM13BQ9NYF5 915 aa5.98□□□□□ -1.45
SHCBP1-202ENST00000563219 PATL2C9JE40 543 aaKnown RBP5.97□□□□□ -1.45
SHCBP1-202ENST00000563219 DEAF1O75398 565 aaPredicted RBP5.97□□□□□ -1.45
SHCBP1-202ENST00000563219 GHRHP01286 108 aa5.97□□□□□ -1.45
SHCBP1-202ENST00000563219 TRIP4Q15650 581 aaPredicted RBP5.97□□□□□ -1.45
SHCBP1-202ENST00000563219 PRSS36Q5K4E3 855 aa5.97□□□□□ -1.45
SHCBP1-202ENST00000563219 NSUN5Q96P11 429 aaKnown RBP5.97□□□□□ -1.45
SHCBP1-202ENST00000563219 STIM2Q9P246 746 aa5.97□□□□□ -1.45
SHCBP1-202ENST00000563219 UBAP1LF5GYI3 381 aa5.96□□□□□ -1.46
SHCBP1-202ENST00000563219 TXNDC2Q86VQ3 553 aa5.96□□□□□ -1.46
SHCBP1-202ENST00000563219 OR13H1Q8NG92 308 aa5.96□□□□□ -1.46
SHCBP1-202ENST00000563219 WFDC12Q8WWY7 111 aa5.96□□□□□ -1.46
SHCBP1-202ENST00000563219 TP53INP1Q96A56 240 aa5.96□□□□□ -1.46
SHCBP1-202ENST00000563219 RBSNQ9H1K0 784 aa5.96□□□□□ -1.46
SHCBP1-202ENST00000563219 GNEQ9Y223 722 aaKnown RBP5.96□□□□□ -1.46
SHCBP1-202ENST00000563219 DLL1O00548 723 aa5.95□□□□□ -1.46
SHCBP1-202ENST00000563219 ZBTB39O15060 712 aa5.95□□□□□ -1.46
SHCBP1-202ENST00000563219 NOS3P29474 1203 aa5.95□□□□□ -1.46
SHCBP1-202ENST00000563219 ZAP70P43403 619 aa5.95□□□□□ -1.46
SHCBP1-202ENST00000563219 IREB2P48200 963 aaKnown RBP5.95□□□□□ -1.46
SHCBP1-202ENST00000563219 FOXD4L6Q3SYB3 417 aaPredicted RBP5.95□□□□□ -1.46
SHCBP1-202ENST00000563219 GDF6Q6KF10 455 aaPredicted RBP5.95□□□□□ -1.46
SHCBP1-202ENST00000563219 FOXD4L3Q6VB84 417 aaPredicted RBP5.95□□□□□ -1.46
SHCBP1-202ENST00000563219 IL22RA1Q8N6P7 574 aa5.95□□□□□ -1.46
SHCBP1-202ENST00000563219 FNDC3AQ9Y2H6 1198 aaKnown RBP5.95□□□□□ -1.46
SHCBP1-202ENST00000563219 CACTIN-AS1Q8N1I8 211 aa5.94□□□□□ -1.46
SHCBP1-202ENST00000563219 GPR152Q8TDT2 470 aa5.94□□□□□ -1.46
SHCBP1-202ENST00000563219 SCNN1AP37088 669 aa5.93□□□□□ -1.46
SHCBP1-202ENST00000563219 HYAL2Q12891 473 aa5.93□□□□□ -1.46
SHCBP1-202ENST00000563219 COL13A1Q5TAT6 717 aaPredicted RBP5.93□□□□□ -1.46
SHCBP1-202ENST00000563219 TTC39BQ5VTQ0 682 aaPredicted RBP5.93□□□□□ -1.46
SHCBP1-202ENST00000563219 AEBP1Q8IUX7 1158 aa5.93□□□□□ -1.46
SHCBP1-202ENST00000563219 MAP4K3Q8IVH8 894 aa5.93□□□□□ -1.46
SHCBP1-202ENST00000563219 TMEM130Q8N3G9 435 aa5.93□□□□□ -1.46
SHCBP1-202ENST00000563219 ABTB2Q8N961 1025 aa5.93□□□□□ -1.46
SHCBP1-202ENST00000563219 CCER1Q8TC90 406 aaPredicted RBP5.93□□□□□ -1.46
SHCBP1-202ENST00000563219 SRA1Q9HD15 236 aaKnown RBP5.93□□□□□ -1.46
SHCBP1-202ENST00000563219 MTMR7Q9Y216 660 aa5.93□□□□□ -1.46
SHCBP1-202ENST00000563219 SETDB1Q15047 1291 aa5.92□□□□□ -1.46
SHCBP1-202ENST00000563219 DCAF11Q8TEB1 546 aa5.92□□□□□ -1.46
SHCBP1-202ENST00000563219 MRPL18Q9H0U6 180 aaKnown RBP5.92□□□□□ -1.46
SHCBP1-202ENST00000563219 MUC3BQ9H195 1237 aa5.92□□□□□ -1.46
SHCBP1-202ENST00000563219 AKTIPQ9H8T0 292 aa5.92□□□□□ -1.46
SHCBP1-202ENST00000563219 SEPT3Q9UH03 358 aa5.92□□□□□ -1.46
SHCBP1-202ENST00000563219 EGFL7Q9UHF1 273 aa5.92□□□□□ -1.46
SHCBP1-202ENST00000563219 TRIM33Q9UPN9 1127 aa5.92□□□□□ -1.46
SHCBP1-202ENST00000563219 PPME1Q9Y570 386 aa5.92□□□□□ -1.46
SHCBP1-202ENST00000563219 KIF4AO95239 1232 aa5.91□□□□□ -1.46
SHCBP1-202ENST00000563219 ARTNQ5T4W7 220 aa5.91□□□□□ -1.46
SHCBP1-202ENST00000563219 DZIP1LQ8IYY4 767 aaKnown RBP5.91□□□□□ -1.46
SHCBP1-202ENST00000563219 MEGF10Q96KG7 1140 aa5.91□□□□□ -1.46
SHCBP1-202ENST00000563219 SPACA7Q96KW9 195 aa5.91□□□□□ -1.46
SHCBP1-202ENST00000563219 ABI2Q9NYB9 513 aaPredicted RBP5.91□□□□□ -1.46
SHCBP1-202ENST00000563219 IVNS1ABPQ9Y6Y0 642 aa5.91□□□□□ -1.46
SHCBP1-202ENST00000563219 SCO2A0A1W2PP80 73 aa5.9□□□□□ -1.46
SHCBP1-202ENST00000563219 F8W735 103 aaPredicted RBP5.9□□□□□ -1.46
SHCBP1-202ENST00000563219 ALX3O95076 343 aa5.9□□□□□ -1.46
SHCBP1-202ENST00000563219 PDE12Q6L8Q7 609 aaKnown RBP5.9□□□□□ -1.46
SHCBP1-202ENST00000563219 HELQQ8TDG4 1101 aa5.9□□□□□ -1.46
SHCBP1-202ENST00000563219 GTF3C2Q8WUA4 911 aaPredicted RBP5.9□□□□□ -1.46
SHCBP1-202ENST00000563219 ELP3Q9H9T3 547 aa5.9□□□□□ -1.46
SHCBP1-202ENST00000563219 SMNDC1O75940 238 aaKnown RBP eCLIP5.89□□□□□ -1.47
SHCBP1-202ENST00000563219 SERPINB4P48594 390 aa5.89□□□□□ -1.47
SHCBP1-202ENST00000563219 ATP11AP98196 1134 aa5.89□□□□□ -1.47
SHCBP1-202ENST00000563219 CEP135Q66GS9 1140 aa5.89□□□□□ -1.47
SHCBP1-202ENST00000563219 CEP120Q8N960 986 aa5.89□□□□□ -1.47
SHCBP1-202ENST00000563219 NUDT16Q96DE0 195 aaKnown RBP5.89□□□□□ -1.47
SHCBP1-202ENST00000563219 PBX4Q9BYU1 374 aa5.89□□□□□ -1.47
SHCBP1-202ENST00000563219 ZFP64Q9NPA5 681 aa5.89□□□□□ -1.47
SHCBP1-202ENST00000563219 ZBTB7CA1YPR0 619 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 LINC01387J3KSC0 135 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 CYP2E1P05181 493 aaPredicted RBP5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 RPLP1P05386 114 aaKnown RBP5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 NPR3P17342 541 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 CDC27P30260 824 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 TRIM26Q12899 539 aaPredicted RBP5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 SF3B2Q13435 895 aaKnown RBP5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 XKR5Q6UX68 686 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 PRR23CQ6ZRP0 262 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 ATCAYQ86WG3 371 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 NCAPG2Q86XI2 1143 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 GALNT11Q8NCW6 608 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 LACRTQ9GZZ8 138 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms