RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 NIM1KQ8IY84 436 aa11.9□□□□□ -0.5
CHRFAM7A-204ENST00000562729 ATP6V0A2Q9Y487 856 aa11.9□□□□□ -0.5
CHRFAM7A-204ENST00000562729 GJA3Q9Y6H8 435 aa11.9□□□□□ -0.5
CHRFAM7A-204ENST00000562729 PPIP5K2O43314 1243 aa11.89□□□□□ -0.51
CHRFAM7A-204ENST00000562729 GRAPQ13588 217 aa11.89□□□□□ -0.51
CHRFAM7A-204ENST00000562729 TMC4Q7Z404 712 aa11.89□□□□□ -0.51
CHRFAM7A-204ENST00000562729 MPNDQ8N594 471 aa11.89□□□□□ -0.51
CHRFAM7A-204ENST00000562729 ZBTB38Q8NAP3 1195 aaPredicted RBP11.89□□□□□ -0.51
CHRFAM7A-204ENST00000562729 CCDC191Q8NCU4 936 aa11.89□□□□□ -0.51
CHRFAM7A-204ENST00000562729 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
CHRFAM7A-204ENST00000562729 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
CHRFAM7A-204ENST00000562729 METTL22Q9BUU2 404 aaPredicted RBP11.89□□□□□ -0.51
CHRFAM7A-204ENST00000562729 LAMB2P55268 1798 aa11.89□□□□□ -0.51
CHRFAM7A-204ENST00000562729 PI4KAP2A4QPH2 592 aa11.88□□□□□ -0.51
CHRFAM7A-204ENST00000562729 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
CHRFAM7A-204ENST00000562729 MKRN3Q13064 507 aaKnown RBP11.88□□□□□ -0.51
CHRFAM7A-204ENST00000562729 TRIM28Q13263 835 aaKnown RBP11.88□□□□□ -0.51
CHRFAM7A-204ENST00000562729 FKBP5Q13451 457 aaPredicted RBP11.88□□□□□ -0.51
CHRFAM7A-204ENST00000562729 EAPPQ56P03 285 aaPredicted RBP11.88□□□□□ -0.51
CHRFAM7A-204ENST00000562729 KSR2Q6VAB6 950 aa11.88□□□□□ -0.51
CHRFAM7A-204ENST00000562729 SP8Q8IXZ3 490 aa11.88□□□□□ -0.51
CHRFAM7A-204ENST00000562729 PI4KAP1Q8N8J0 262 aa11.88□□□□□ -0.51
CHRFAM7A-204ENST00000562729 WDR90Q96KV7 1748 aa11.88□□□□□ -0.51
CHRFAM7A-204ENST00000562729 ZNF541Q9H0D2 1346 aa11.87□□□□□ -0.51
CHRFAM7A-204ENST00000562729 EXOSC9Q06265 439 aaKnown RBP11.87□□□□□ -0.51
CHRFAM7A-204ENST00000562729 AOC3Q16853 763 aa11.87□□□□□ -0.51
CHRFAM7A-204ENST00000562729 CCDC152Q4G0S7 254 aa11.87□□□□□ -0.51
CHRFAM7A-204ENST00000562729 SPNS2Q8IVW8 549 aa11.87□□□□□ -0.51
CHRFAM7A-204ENST00000562729 GPC2Q8N158 579 aa11.87□□□□□ -0.51
CHRFAM7A-204ENST00000562729 HACL1Q9UJ83 578 aa11.87□□□□□ -0.51
CHRFAM7A-204ENST00000562729 DDX60Q8IY21 1712 aaKnown RBP11.86□□□□□ -0.51
CHRFAM7A-204ENST00000562729 G3V3G9 751 aa11.86□□□□□ -0.51
CHRFAM7A-204ENST00000562729 C6orf229H3BNL8 230 aa11.86□□□□□ -0.51
CHRFAM7A-204ENST00000562729 PDE8AO60658 829 aa11.86□□□□□ -0.51
CHRFAM7A-204ENST00000562729 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
CHRFAM7A-204ENST00000562729 JARID2Q92833 1246 aaPredicted RBP11.86□□□□□ -0.51
CHRFAM7A-204ENST00000562729 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
CHRFAM7A-204ENST00000562729 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
CHRFAM7A-204ENST00000562729 VPS33BQ9H267 617 aa11.86□□□□□ -0.51
CHRFAM7A-204ENST00000562729 NSFL1CQ9UNZ2 370 aaKnown RBP11.86□□□□□ -0.51
CHRFAM7A-204ENST00000562729 FZD9O00144 591 aa11.85□□□□□ -0.51
CHRFAM7A-204ENST00000562729 PCCAP05165 728 aaPredicted RBP11.85□□□□□ -0.51
CHRFAM7A-204ENST00000562729 PSEN1P49768 467 aa11.85□□□□□ -0.51
CHRFAM7A-204ENST00000562729 FLIIQ13045 1269 aa11.85□□□□□ -0.51
CHRFAM7A-204ENST00000562729 MMRN1Q13201 1228 aa11.85□□□□□ -0.51
CHRFAM7A-204ENST00000562729 ANKIB1Q9P2G1 1089 aa11.85□□□□□ -0.51
CHRFAM7A-204ENST00000562729 CEP350Q5VT06 3117 aa11.84□□□□□ -0.51
CHRFAM7A-204ENST00000562729 SCN4AP35499 1836 aa11.84□□□□□ -0.51
CHRFAM7A-204ENST00000562729 EPHX2P34913 555 aa11.84□□□□□ -0.51
CHRFAM7A-204ENST00000562729 RPS8P62241 208 aaKnown RBP11.84□□□□□ -0.51
CHRFAM7A-204ENST00000562729 G2E3Q7L622 706 aa11.84□□□□□ -0.51
CHRFAM7A-204ENST00000562729 PNMA8AQ86V59 439 aaPredicted RBP11.84□□□□□ -0.51
CHRFAM7A-204ENST00000562729 LDHDQ86WU2 507 aa11.84□□□□□ -0.51
CHRFAM7A-204ENST00000562729 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
CHRFAM7A-204ENST00000562729 EYA3Q99504 573 aa11.84□□□□□ -0.51
CHRFAM7A-204ENST00000562729 TAF1DQ9H5J8 278 aaPredicted RBP11.84□□□□□ -0.51
CHRFAM7A-204ENST00000562729 ZNRF3Q9ULT6 936 aa11.84□□□□□ -0.51
CHRFAM7A-204ENST00000562729 TAF1P21675 1872 aa11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 POTECB2RU33 542 aa11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 VAMP4O75379 141 aa11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 TNIP1Q15025 636 aa11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 WASHC4Q2M389 1173 aa11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 CWF19L2Q2TBE0 894 aaKnown RBP11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 UBE3BQ7Z3V4 1068 aa11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 SLC51AQ86UW1 340 aa11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 ANKRD18AQ8IVF6 992 aa11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 DNAAF4Q8WXU2 420 aa11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 CDC5LQ99459 802 aaKnown RBP11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 BCL2L13Q9BXK5 485 aa11.83□□□□□ -0.52
CHRFAM7A-204ENST00000562729 NEURL1BA8MQ27 555 aa11.82□□□□□ -0.52
CHRFAM7A-204ENST00000562729 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
CHRFAM7A-204ENST00000562729 CTSWP56202 376 aa11.82□□□□□ -0.52
CHRFAM7A-204ENST00000562729 RTFDC1Q9BY42 306 aaPredicted RBP11.82□□□□□ -0.52
CHRFAM7A-204ENST00000562729 SNED1Q8TER0 1413 aa11.82□□□□□ -0.52
CHRFAM7A-204ENST00000562729 CDHR2Q9BYE9 1310 aa11.82□□□□□ -0.52
CHRFAM7A-204ENST00000562729 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
CHRFAM7A-204ENST00000562729 RAD17O75943 681 aa11.81□□□□□ -0.52
CHRFAM7A-204ENST00000562729 IGKV5-2P06315 115 aa11.81□□□□□ -0.52
CHRFAM7A-204ENST00000562729 GPSM2P81274 684 aa11.81□□□□□ -0.52
CHRFAM7A-204ENST00000562729 HTRA3P83110 453 aa11.81□□□□□ -0.52
CHRFAM7A-204ENST00000562729 KIAA2012Q0VF49 1180 aa11.81□□□□□ -0.52
CHRFAM7A-204ENST00000562729 CIAPIN1Q6FI81 312 aa11.81□□□□□ -0.52
CHRFAM7A-204ENST00000562729 ZC3H12CQ9C0D7 883 aaKnown RBP11.81□□□□□ -0.52
CHRFAM7A-204ENST00000562729 SEC31BQ9NQW1 1179 aa11.81□□□□□ -0.52
CHRFAM7A-204ENST00000562729 E9PSI1 815 aa11.8□□□□□ -0.52
CHRFAM7A-204ENST00000562729 UFL1O94874 794 aa11.8□□□□□ -0.52
CHRFAM7A-204ENST00000562729 IGHMBP2P38935 993 aaKnown RBP11.8□□□□□ -0.52
CHRFAM7A-204ENST00000562729 GCKRQ14397 625 aa11.8□□□□□ -0.52
CHRFAM7A-204ENST00000562729 SLC4A10Q6U841 1118 aa11.8□□□□□ -0.52
CHRFAM7A-204ENST00000562729 LINS1Q8NG48 757 aa11.8□□□□□ -0.52
CHRFAM7A-204ENST00000562729 GGA1Q9UJY5 639 aa11.8□□□□□ -0.52
CHRFAM7A-204ENST00000562729 CHMP3Q9Y3E7 222 aa11.8□□□□□ -0.52
CHRFAM7A-204ENST00000562729 COL4A5P29400 1685 aa11.79□□□□□ -0.52
CHRFAM7A-204ENST00000562729 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
CHRFAM7A-204ENST00000562729 CXCL9Q07325 125 aa11.79□□□□□ -0.52
CHRFAM7A-204ENST00000562729 DBNDD1Q9H9R9 158 aa11.79□□□□□ -0.52
CHRFAM7A-204ENST00000562729 C9orf78Q9NZ63 289 aaPredicted RBP11.79□□□□□ -0.52
CHRFAM7A-204ENST00000562729 MYH3P11055 1940 aa11.79□□□□□ -0.52
CHRFAM7A-204ENST00000562729 LRRC37AA6NMS7 1700 aa11.79□□□□□ -0.52
CHRFAM7A-204ENST00000562729 F6X3S4 739 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms