RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 STIM2Q9P246 746 aa8.63□□□□□ -1.03
SMG1-206ENST00000562668 GTF3C3Q9Y5Q9 886 aa8.63□□□□□ -1.03
SMG1-206ENST00000562668 DYRK3O43781 588 aa8.62□□□□□ -1.03
SMG1-206ENST00000562668 GHRHP01286 108 aa8.62□□□□□ -1.03
SMG1-206ENST00000562668 FBXO11Q86XK2 927 aa8.62□□□□□ -1.03
SMG1-206ENST00000562668 USP21Q9UK80 565 aa8.62□□□□□ -1.03
SMG1-206ENST00000562668 LOC102724428A0A0B4J2F2 783 aa8.61□□□□□ -1.03
SMG1-206ENST00000562668 J3QW42 95 aa8.61□□□□□ -1.03
SMG1-206ENST00000562668 SIK1P57059 783 aa8.61□□□□□ -1.03
SMG1-206ENST00000562668 RBSNQ9H1K0 784 aa8.61□□□□□ -1.03
SMG1-206ENST00000562668 XP32Q5T750 250 aa8.6□□□□□ -1.03
SMG1-206ENST00000562668 CCDC82Q8N4S0 544 aa8.6□□□□□ -1.03
SMG1-206ENST00000562668 OR13H1Q8NG92 308 aa8.59□□□□□ -1.03
SMG1-206ENST00000562668 GPR152Q8TDT2 470 aa8.59□□□□□ -1.03
SMG1-206ENST00000562668 SEPT3Q9UH03 358 aa8.59□□□□□ -1.03
SMG1-206ENST00000562668 FNDC3AQ9Y2H6 1198 aaKnown RBP8.59□□□□□ -1.03
SMG1-206ENST00000562668 DEAF1O75398 565 aaPredicted RBP8.58□□□□□ -1.04
SMG1-206ENST00000562668 GDF6Q6KF10 455 aaPredicted RBP8.58□□□□□ -1.04
SMG1-206ENST00000562668 Q8N3U1 123 aa8.58□□□□□ -1.04
SMG1-206ENST00000562668 ZBTB39O15060 712 aa8.57□□□□□ -1.04
SMG1-206ENST00000562668 H2AFB1P0C5Y9 115 aa8.56□□□□□ -1.04
SMG1-206ENST00000562668 H2AFB2P0C5Z0 115 aa8.56□□□□□ -1.04
SMG1-206ENST00000562668 HYAL2Q12891 473 aa8.56□□□□□ -1.04
SMG1-206ENST00000562668 ZMYM1Q5SVZ6 1142 aa8.56□□□□□ -1.04
SMG1-206ENST00000562668 IGF2-ASQ6U949 168 aa8.56□□□□□ -1.04
SMG1-206ENST00000562668 HELQQ8TDG4 1101 aa8.56□□□□□ -1.04
SMG1-206ENST00000562668 SSBP4Q9BWG4 385 aaPredicted RBP8.56□□□□□ -1.04
SMG1-206ENST00000562668 SRA1Q9HD15 236 aaKnown RBP8.56□□□□□ -1.04
SMG1-206ENST00000562668 TRIM33Q9UPN9 1127 aa8.56□□□□□ -1.04
SMG1-206ENST00000562668 DLL1O00548 723 aa8.55□□□□□ -1.04
SMG1-206ENST00000562668 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
SMG1-206ENST00000562668 TTC39BQ5VTQ0 682 aaPredicted RBP8.55□□□□□ -1.04
SMG1-206ENST00000562668 IL22RA1Q8N6P7 574 aa8.55□□□□□ -1.04
SMG1-206ENST00000562668 ABI2Q9NYB9 513 aaPredicted RBP8.55□□□□□ -1.04
SMG1-206ENST00000562668 ATCAYQ86WG3 371 aa8.54□□□□□ -1.04
SMG1-206ENST00000562668 MAP4K3Q8IVH8 894 aa8.54□□□□□ -1.04
SMG1-206ENST00000562668 CACTIN-AS1Q8N1I8 211 aa8.54□□□□□ -1.04
SMG1-206ENST00000562668 WFDC12Q8WWY7 111 aa8.54□□□□□ -1.04
SMG1-206ENST00000562668 TP53INP1Q96A56 240 aa8.54□□□□□ -1.04
SMG1-206ENST00000562668 NUDT16Q96DE0 195 aaKnown RBP8.54□□□□□ -1.04
SMG1-206ENST00000562668 TMEM88BA6NKF7 163 aa8.53□□□□□ -1.04
SMG1-206ENST00000562668 PPP1R15AO75807 674 aaPredicted RBP8.53□□□□□ -1.04
SMG1-206ENST00000562668 KIF4AO95239 1232 aa8.53□□□□□ -1.04
SMG1-206ENST00000562668 NOS3P29474 1203 aa8.53□□□□□ -1.04
SMG1-206ENST00000562668 ATP11AP98196 1134 aa8.53□□□□□ -1.04
SMG1-206ENST00000562668 PRSS36Q5K4E3 855 aa8.53□□□□□ -1.04
SMG1-206ENST00000562668 PDE12Q6L8Q7 609 aaKnown RBP8.53□□□□□ -1.04
SMG1-206ENST00000562668 DCAF11Q8TEB1 546 aa8.53□□□□□ -1.04
SMG1-206ENST00000562668 SPACA7Q96KW9 195 aa8.53□□□□□ -1.04
SMG1-206ENST00000562668 C1orf115Q9H7X2 142 aa8.53□□□□□ -1.04
SMG1-206ENST00000562668 SCNN1AP37088 669 aa8.52□□□□□ -1.05
SMG1-206ENST00000562668 IREB2P48200 963 aaKnown RBP8.52□□□□□ -1.05
SMG1-206ENST00000562668 MUC3BQ9H195 1237 aa8.52□□□□□ -1.05
SMG1-206ENST00000562668 SMNDC1O75940 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMG1-206ENST00000562668 CYP2E1P05181 493 aaPredicted RBP8.51□□□□□ -1.05
SMG1-206ENST00000562668 RPLP1P05386 114 aaKnown RBP8.51□□□□□ -1.05
SMG1-206ENST00000562668 SETDB1Q15047 1291 aa8.51□□□□□ -1.05
SMG1-206ENST00000562668 FOXD4L6Q3SYB3 417 aaPredicted RBP8.51□□□□□ -1.05
SMG1-206ENST00000562668 FOXD4L3Q6VB84 417 aaPredicted RBP8.51□□□□□ -1.05
SMG1-206ENST00000562668 ZNF438Q7Z4V0 828 aa8.51□□□□□ -1.05
SMG1-206ENST00000562668 EDEM1Q92611 657 aa8.51□□□□□ -1.05
SMG1-206ENST00000562668 MEGF10Q96KG7 1140 aa8.51□□□□□ -1.05
SMG1-206ENST00000562668 MRPL18Q9H0U6 180 aaKnown RBP8.51□□□□□ -1.05
SMG1-206ENST00000562668 ELP3Q9H9T3 547 aa8.51□□□□□ -1.05
SMG1-206ENST00000562668 TMEM63CQ9P1W3 806 aa8.51□□□□□ -1.05
SMG1-206ENST00000562668 EIF4G1Q04637 1599 aaKnown RBP8.5□□□□□ -1.05
SMG1-206ENST00000562668 CEP135Q66GS9 1140 aa8.5□□□□□ -1.05
SMG1-206ENST00000562668 RASSF4Q9H2L5 321 aa8.5□□□□□ -1.05
SMG1-206ENST00000562668 PCSK2P16519 638 aa8.49□□□□□ -1.05
SMG1-206ENST00000562668 MPSTP25325 297 aa8.49□□□□□ -1.05
SMG1-206ENST00000562668 SSFA2P28290 1259 aa8.49□□□□□ -1.05
SMG1-206ENST00000562668 NOM1Q5C9Z4 860 aaKnown RBP8.49□□□□□ -1.05
SMG1-206ENST00000562668 GTF3C2Q8WUA4 911 aaPredicted RBP8.49□□□□□ -1.05
SMG1-206ENST00000562668 LACRTQ9GZZ8 138 aa8.49□□□□□ -1.05
SMG1-206ENST00000562668 AKTIPQ9H8T0 292 aa8.49□□□□□ -1.05
SMG1-206ENST00000562668 PPME1Q9Y570 386 aa8.49□□□□□ -1.05
SMG1-206ENST00000562668 SCO2A0A1W2PP80 73 aa8.48□□□□□ -1.05
SMG1-206ENST00000562668 F8W735 103 aaPredicted RBP8.48□□□□□ -1.05
SMG1-206ENST00000562668 PDGFAP04085 211 aa8.48□□□□□ -1.05
SMG1-206ENST00000562668 EIF1AXP47813 144 aaKnown RBP8.48□□□□□ -1.05
SMG1-206ENST00000562668 DNM1Q05193 864 aaKnown RBP8.48□□□□□ -1.05
SMG1-206ENST00000562668 NCAPG2Q86XI2 1143 aa8.48□□□□□ -1.05
SMG1-206ENST00000562668 KANSL3Q9P2N6 904 aa8.48□□□□□ -1.05
SMG1-206ENST00000562668 MZF1P28698 734 aaPredicted RBP8.47□□□□□ -1.05
SMG1-206ENST00000562668 CDC27P30260 824 aa8.47□□□□□ -1.05
SMG1-206ENST00000562668 Q6ZS46 218 aa8.47□□□□□ -1.05
SMG1-206ENST00000562668 TMEM130Q8N3G9 435 aa8.47□□□□□ -1.05
SMG1-206ENST00000562668 CEP120Q8N960 986 aa8.47□□□□□ -1.05
SMG1-206ENST00000562668 PBX4Q9BYU1 374 aa8.47□□□□□ -1.05
SMG1-206ENST00000562668 LINC01387J3KSC0 135 aa8.46□□□□□ -1.06
SMG1-206ENST00000562668 MTMR3Q13615 1198 aa8.46□□□□□ -1.06
SMG1-206ENST00000562668 ALKBH2Q6NS38 261 aa8.46□□□□□ -1.06
SMG1-206ENST00000562668 TXNDC11Q6PKC3 985 aa8.46□□□□□ -1.06
SMG1-206ENST00000562668 XKR5Q6UX68 686 aa8.46□□□□□ -1.06
SMG1-206ENST00000562668 C14orf37Q86TY3 774 aa8.46□□□□□ -1.06
SMG1-206ENST00000562668 CNTN3Q9P232 1028 aa8.46□□□□□ -1.06
SMG1-206ENST00000562668 CECR2Q9BXF3 1484 aa8.45□□□□□ -1.06
SMG1-206ENST00000562668 ALX3O95076 343 aa8.45□□□□□ -1.06
SMG1-206ENST00000562668 PTPRAP18433 802 aa8.45□□□□□ -1.06
SMG1-206ENST00000562668 ADAMTSL4Q6UY14 1074 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms