RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 VAMP4O75379 141 aa16.77■□□□□ 0.28
AC009055.1-201ENST00000562656 FLIIQ13045 1269 aa16.77■□□□□ 0.28
AC009055.1-201ENST00000562656 COL13A1Q5TAT6 717 aaPredicted RBP16.77■□□□□ 0.28
AC009055.1-201ENST00000562656 G2E3Q7L622 706 aa16.77■□□□□ 0.28
AC009055.1-201ENST00000562656 JARID2Q92833 1246 aaPredicted RBP16.77■□□□□ 0.28
AC009055.1-201ENST00000562656 DBNDD1Q9H9R9 158 aa16.77■□□□□ 0.28
AC009055.1-201ENST00000562656 GGA1Q9UJY5 639 aa16.77■□□□□ 0.28
AC009055.1-201ENST00000562656 H7C1W4 665 aa16.76■□□□□ 0.27
AC009055.1-201ENST00000562656 CWF19L2Q2TBE0 894 aaKnown RBP16.76■□□□□ 0.27
AC009055.1-201ENST00000562656 TTLL11Q8NHH1 800 aa16.76■□□□□ 0.27
AC009055.1-201ENST00000562656 ABT1Q9ULW3 272 aaKnown RBP16.76■□□□□ 0.27
AC009055.1-201ENST00000562656 XDHP47989 1333 aa16.75■□□□□ 0.27
AC009055.1-201ENST00000562656 UFL1O94874 794 aa16.75■□□□□ 0.27
AC009055.1-201ENST00000562656 HIRAP54198 1017 aaPredicted RBP16.75■□□□□ 0.27
AC009055.1-201ENST00000562656 MICALL2Q8IY33 904 aa16.75■□□□□ 0.27
AC009055.1-201ENST00000562656 DNAAF4Q8WXU2 420 aa16.75■□□□□ 0.27
AC009055.1-201ENST00000562656 CCDC85AQ96PX6 553 aaPredicted RBP16.75■□□□□ 0.27
AC009055.1-201ENST00000562656 PLA2G12BQ9BX93 195 aa16.75■□□□□ 0.27
AC009055.1-201ENST00000562656 MYH16Q9H6N6 1097 aa16.75■□□□□ 0.27
AC009055.1-201ENST00000562656 BSDC1Q9NW68 430 aaPredicted RBP16.75■□□□□ 0.27
AC009055.1-201ENST00000562656 ATP2B4P23634 1241 aa16.74■□□□□ 0.27
AC009055.1-201ENST00000562656 EXOSC9Q06265 439 aaKnown RBP16.74■□□□□ 0.27
AC009055.1-201ENST00000562656 FKBP5Q13451 457 aaPredicted RBP16.74■□□□□ 0.27
AC009055.1-201ENST00000562656 GCKRQ14397 625 aa16.74■□□□□ 0.27
AC009055.1-201ENST00000562656 DOK7Q18PE1 504 aa16.74■□□□□ 0.27
AC009055.1-201ENST00000562656 CST9Q5W186 159 aa16.74■□□□□ 0.27
AC009055.1-201ENST00000562656 CDC37L1Q7L3B6 337 aa16.74■□□□□ 0.27
AC009055.1-201ENST00000562656 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
AC009055.1-201ENST00000562656 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
AC009055.1-201ENST00000562656 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
AC009055.1-201ENST00000562656 WDR33Q9C0J8 1336 aaKnown RBP16.73■□□□□ 0.27
AC009055.1-201ENST00000562656 ZNF609O15014 1411 aa16.73■□□□□ 0.27
AC009055.1-201ENST00000562656 G3V3G9 751 aa16.73■□□□□ 0.27
AC009055.1-201ENST00000562656 TRAF5O00463 557 aa16.73■□□□□ 0.27
AC009055.1-201ENST00000562656 VIL1P09327 827 aaKnown RBP16.73■□□□□ 0.27
AC009055.1-201ENST00000562656 ECE1P42892 770 aa16.73■□□□□ 0.27
AC009055.1-201ENST00000562656 DCAF8Q5TAQ9 597 aa16.73■□□□□ 0.27
AC009055.1-201ENST00000562656 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
AC009055.1-201ENST00000562656 TRPM4Q8TD43 1214 aa16.73■□□□□ 0.27
AC009055.1-201ENST00000562656 TLL2Q9Y6L7 1015 aa16.73■□□□□ 0.27
AC009055.1-201ENST00000562656 FMR1Q06787 632 aaKnown RBP eCLIP16.72■□□□□ 0.27
AC009055.1-201ENST00000562656 PODNQ7Z5L7 613 aa16.72■□□□□ 0.27
AC009055.1-201ENST00000562656 AIDAQ96BJ3 306 aa16.72■□□□□ 0.27
AC009055.1-201ENST00000562656 GPR101Q96P66 508 aaPredicted RBP16.72■□□□□ 0.27
AC009055.1-201ENST00000562656 GLIS2Q9BZE0 524 aaPredicted RBP16.72■□□□□ 0.27
AC009055.1-201ENST00000562656 GREM2Q9H772 168 aa16.72■□□□□ 0.27
AC009055.1-201ENST00000562656 KCNQ5Q9NR82 932 aa16.72■□□□□ 0.27
AC009055.1-201ENST00000562656 WBP1LQ9NX94 342 aa16.72■□□□□ 0.27
AC009055.1-201ENST00000562656 SCN9AQ15858 1988 aa16.71■□□□□ 0.27
AC009055.1-201ENST00000562656 PSME4Q14997 1843 aa16.71■□□□□ 0.27
AC009055.1-201ENST00000562656 CASP7P55210 303 aa16.71■□□□□ 0.27
AC009055.1-201ENST00000562656 MAP2K1Q02750 393 aaPredicted RBP16.71■□□□□ 0.27
AC009055.1-201ENST00000562656 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
AC009055.1-201ENST00000562656 TNS4Q8IZW8 715 aa16.71■□□□□ 0.27
AC009055.1-201ENST00000562656 AGBL3Q8NEM8 1001 aa16.71■□□□□ 0.27
AC009055.1-201ENST00000562656 HHIPL1Q96JK4 782 aa16.71■□□□□ 0.27
AC009055.1-201ENST00000562656 MINPP1Q9UNW1 487 aa16.71■□□□□ 0.27
AC009055.1-201ENST00000562656 THSD7BQ9C0I4 1608 aa16.7■□□□□ 0.26
AC009055.1-201ENST00000562656 MED23Q9ULK4 1368 aa16.7■□□□□ 0.26
AC009055.1-201ENST00000562656 SHTN1A0MZ66 631 aa16.7■□□□□ 0.26
AC009055.1-201ENST00000562656 FOXN1O15353 648 aa16.7■□□□□ 0.26
AC009055.1-201ENST00000562656 CELF2O95319 508 aaKnown RBP16.7■□□□□ 0.26
AC009055.1-201ENST00000562656 CSF1RP07333 972 aa16.7■□□□□ 0.26
AC009055.1-201ENST00000562656 IGHMBP2P38935 993 aaKnown RBP16.7■□□□□ 0.26
AC009055.1-201ENST00000562656 CTCFP49711 727 aaPredicted RBP16.7■□□□□ 0.26
AC009055.1-201ENST00000562656 SAMD7Q7Z3H4 446 aa16.7■□□□□ 0.26
AC009055.1-201ENST00000562656 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
AC009055.1-201ENST00000562656 PRDM10Q9NQV6 1147 aa16.7■□□□□ 0.26
AC009055.1-201ENST00000562656 RSBN1LQ6PCB5 846 aaPredicted RBP16.69■□□□□ 0.26
AC009055.1-201ENST00000562656 SAPCD2Q86UD0 394 aa16.69■□□□□ 0.26
AC009055.1-201ENST00000562656 CAPNS2Q96L46 248 aa16.69■□□□□ 0.26
AC009055.1-201ENST00000562656 LEMD3Q9Y2U8 911 aa16.69■□□□□ 0.26
AC009055.1-201ENST00000562656 ITGA6P23229 1130 aa16.68■□□□□ 0.26
AC009055.1-201ENST00000562656 CCT4P50991 539 aaKnown RBP16.68■□□□□ 0.26
AC009055.1-201ENST00000562656 TBC1D10BQ4KMP7 808 aaPredicted RBP16.68■□□□□ 0.26
AC009055.1-201ENST00000562656 ANKRD2Q9GZV1 360 aa16.68■□□□□ 0.26
AC009055.1-201ENST00000562656 SPEF2Q9C093 1822 aa16.68■□□□□ 0.26
AC009055.1-201ENST00000562656 USP17L3A6NCW0 530 aa16.67■□□□□ 0.26
AC009055.1-201ENST00000562656 USP17L4A6NCW7 530 aa16.67■□□□□ 0.26
AC009055.1-201ENST00000562656 MAP2K2P36507 400 aa16.67■□□□□ 0.26
AC009055.1-201ENST00000562656 ZNF280AP59817 542 aaPredicted RBP16.67■□□□□ 0.26
AC009055.1-201ENST00000562656 KIF4BQ2VIQ3 1234 aa16.67■□□□□ 0.26
AC009055.1-201ENST00000562656 BEND3Q5T5X7 828 aa16.67■□□□□ 0.26
AC009055.1-201ENST00000562656 USP17L1Q7RTZ2 530 aa16.67■□□□□ 0.26
AC009055.1-201ENST00000562656 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
AC009055.1-201ENST00000562656 DCPSQ96C86 337 aaKnown RBP16.67■□□□□ 0.26
AC009055.1-201ENST00000562656 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
AC009055.1-201ENST00000562656 ZNF521Q96K83 1311 aa16.67■□□□□ 0.26
AC009055.1-201ENST00000562656 EGFRP00533 1210 aa16.66■□□□□ 0.26
AC009055.1-201ENST00000562656 CYP4F22Q6NT55 531 aa16.66■□□□□ 0.26
AC009055.1-201ENST00000562656 PAXIP1Q6ZW49 1069 aaPredicted RBP16.66■□□□□ 0.26
AC009055.1-201ENST00000562656 KRT26Q7Z3Y9 468 aa16.66■□□□□ 0.26
AC009055.1-201ENST00000562656 GMLQ99445 158 aa16.66■□□□□ 0.26
AC009055.1-201ENST00000562656 COA1Q9GZY4 146 aa16.66■□□□□ 0.26
AC009055.1-201ENST00000562656 POLR2AP24928 1970 aaKnown RBP16.66■□□□□ 0.26
AC009055.1-201ENST00000562656 ANKRD18BA2A2Z9 1011 aa16.65■□□□□ 0.26
AC009055.1-201ENST00000562656 USP17L8P0C7I0 530 aa16.65■□□□□ 0.26
AC009055.1-201ENST00000562656 MMP14P50281 582 aa16.65■□□□□ 0.26
AC009055.1-201ENST00000562656 FAM161AQ3B820 660 aa16.65■□□□□ 0.26
AC009055.1-201ENST00000562656 RBM26Q5T8P6 1007 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms