RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 SIK1P57059 783 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 ITPK1Q13572 414 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 DCTN1Q14203 1278 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 LAPTM4AQ15012 233 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 CCDC184Q52MB2 194 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 MCM10Q7L590 875 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 CCDC146Q8IYE0 955 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 LINC00116Q8NCU8 138 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 ARMC2Q8NEN0 867 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 IL17REQ8NFR9 667 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 GAS2L2Q8NHY3 880 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 SLC4A9Q96Q91 983 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 UNC93B1Q9H1C4 597 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 SLC52A2Q9HAB3 445 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 MAP3K5Q99683 1374 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 F12P00748 615 aaPredicted RBP7.68□□□□□ -1.18
CDH13-206ENST00000562601 AMIGO3Q86WK7 504 aa7.68□□□□□ -1.18
CDH13-206ENST00000562601 PLEKHF1Q96S99 279 aa7.68□□□□□ -1.18
CDH13-206ENST00000562601 C4BP0C0L5 1744 aa7.68□□□□□ -1.18
CDH13-206ENST00000562601 PNPLA7Q6ZV29 1317 aa7.68□□□□□ -1.18
CDH13-206ENST00000562601 ADAMTS7Q9UKP4 1686 aa7.67□□□□□ -1.18
CDH13-206ENST00000562601 SIPA1L3O60292 1781 aaPredicted RBP7.67□□□□□ -1.18
CDH13-206ENST00000562601 UBR3Q6ZT12 1888 aa7.67□□□□□ -1.18
CDH13-206ENST00000562601 SENP3-EIF4A1A0A087X0R7 540 aa7.67□□□□□ -1.18
CDH13-206ENST00000562601 KCNQ3O43525 872 aa7.67□□□□□ -1.18
CDH13-206ENST00000562601 CTDSPL2Q05D32 466 aa7.67□□□□□ -1.18
CDH13-206ENST00000562601 TEFQ10587 303 aa7.67□□□□□ -1.18
CDH13-206ENST00000562601 WDR43Q15061 677 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDH13-206ENST00000562601 COL23A1Q86Y22 540 aaPredicted RBP7.67□□□□□ -1.18
CDH13-206ENST00000562601 PNMA1Q8ND90 353 aa7.67□□□□□ -1.18
CDH13-206ENST00000562601 ADAMTS8Q9UP79 889 aa7.67□□□□□ -1.18
CDH13-206ENST00000562601 RRP7AQ9Y3A4 280 aaKnown RBP7.67□□□□□ -1.18
CDH13-206ENST00000562601 MYH14Q7Z406 1995 aaKnown RBP7.67□□□□□ -1.18
CDH13-206ENST00000562601 LRP5O75197 1615 aa7.67□□□□□ -1.18
CDH13-206ENST00000562601 QSER1Q2KHR3 1735 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 ANP32CO43423 234 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 NEFMP07197 916 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 USP17L8P0C7I0 530 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 PRR20EP86478 221 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 PRR20CP86479 221 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 PRR20DP86480 221 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 PRR20BP86481 221 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 PRR20AP86496 221 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 MSL1Q68DK7 614 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 PTCRAQ6ISU1 281 aaPredicted RBP7.66□□□□□ -1.18
CDH13-206ENST00000562601 RTF1Q92541 710 aaKnown RBP7.66□□□□□ -1.18
CDH13-206ENST00000562601 THUMPD2Q9BTF0 503 aaKnown RBP7.66□□□□□ -1.18
CDH13-206ENST00000562601 SPON1Q9HCB6 807 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 MIS18AQ9NYP9 233 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 MAP10Q9P2G4 905 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 MAPK8IP3Q9UPT6 1336 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 MRC1P22897 1456 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 COL5A3P25940 1745 aaPredicted RBP7.66□□□□□ -1.18
CDH13-206ENST00000562601 TJP1Q07157 1748 aa7.66□□□□□ -1.18
CDH13-206ENST00000562601 BTBD11A6QL63 1104 aa7.65□□□□□ -1.18
CDH13-206ENST00000562601 APBB1O00213 710 aa7.65□□□□□ -1.18
CDH13-206ENST00000562601 RIPK4P57078 832 aa7.65□□□□□ -1.18
CDH13-206ENST00000562601 NFE2L2Q16236 605 aa7.65□□□□□ -1.18
CDH13-206ENST00000562601 TMEM132AQ24JP5 1023 aa7.65□□□□□ -1.18
CDH13-206ENST00000562601 DNAJC10Q8IXB1 793 aa7.65□□□□□ -1.18
CDH13-206ENST00000562601 BANK1Q8NDB2 785 aa7.65□□□□□ -1.18
CDH13-206ENST00000562601 PNNQ9H307 717 aaKnown RBP7.65□□□□□ -1.18
CDH13-206ENST00000562601 PPP1R1BQ9UD71 204 aaPredicted RBP7.65□□□□□ -1.18
CDH13-206ENST00000562601 PDZRN3Q9UPQ7 1066 aa7.65□□□□□ -1.18
CDH13-206ENST00000562601 UBR2Q8IWV8 1755 aa7.64□□□□□ -1.19
CDH13-206ENST00000562601 KCPQ6ZWJ8 1503 aa7.64□□□□□ -1.19
CDH13-206ENST00000562601 CEMIPQ8WUJ3 1361 aa7.64□□□□□ -1.19
CDH13-206ENST00000562601 WNT7AO00755 349 aa7.64□□□□□ -1.19
CDH13-206ENST00000562601 NRG2O14511 850 aaPredicted RBP7.64□□□□□ -1.19
CDH13-206ENST00000562601 Q6ZNB5 142 aa7.64□□□□□ -1.19
CDH13-206ENST00000562601 TTC5Q8N0Z6 440 aa7.64□□□□□ -1.19
CDH13-206ENST00000562601 GPKOWQ92917 476 aaPredicted RBP eCLIP7.64□□□□□ -1.19
CDH13-206ENST00000562601 MTFR1LQ9H019 292 aa7.64□□□□□ -1.19
CDH13-206ENST00000562601 ZNF831Q5JPB2 1677 aa7.63□□□□□ -1.19
CDH13-206ENST00000562601 PRAMEF22A3QJZ6 481 aa7.63□□□□□ -1.19
CDH13-206ENST00000562601 GDF9O60383 454 aa7.63□□□□□ -1.19
CDH13-206ENST00000562601 GFRA3O60609 400 aa7.63□□□□□ -1.19
CDH13-206ENST00000562601 TMPOP42166 694 aaKnown RBP7.63□□□□□ -1.19
CDH13-206ENST00000562601 CRKLP46109 303 aaKnown RBP7.63□□□□□ -1.19
CDH13-206ENST00000562601 FOXC1Q12948 553 aa7.63□□□□□ -1.19
CDH13-206ENST00000562601 ZNF790Q6PG37 636 aa7.63□□□□□ -1.19
CDH13-206ENST00000562601 ZNF511Q8NB15 262 aa7.63□□□□□ -1.19
CDH13-206ENST00000562601 LRRN4Q8WUT4 740 aa7.63□□□□□ -1.19
CDH13-206ENST00000562601 BAP1Q92560 729 aa7.63□□□□□ -1.19
CDH13-206ENST00000562601 RUNDC1Q96C34 613 aa7.63□□□□□ -1.19
CDH13-206ENST00000562601 ZNF496Q96IT1 587 aaPredicted RBP7.63□□□□□ -1.19
CDH13-206ENST00000562601 MRS2Q9HD23 443 aa7.63□□□□□ -1.19
CDH13-206ENST00000562601 ZC3H4Q9UPT8 1303 aaKnown RBP7.62□□□□□ -1.19
CDH13-206ENST00000562601 HTATSF1O43719 755 aaKnown RBP7.62□□□□□ -1.19
CDH13-206ENST00000562601 CYP19A1P11511 503 aaPredicted RBP7.62□□□□□ -1.19
CDH13-206ENST00000562601 TAF7Q15545 349 aaPredicted RBP7.62□□□□□ -1.19
CDH13-206ENST00000562601 TRAPPC3LQ5T215 181 aa7.62□□□□□ -1.19
CDH13-206ENST00000562601 RC3H1Q5TC82 1133 aaKnown RBP7.62□□□□□ -1.19
CDH13-206ENST00000562601 INTS5Q6P9B9 1019 aaKnown RBP7.62□□□□□ -1.19
CDH13-206ENST00000562601 RTCBQ9Y3I0 505 aaKnown RBP7.62□□□□□ -1.19
CDH13-206ENST00000562601 CNTNAP4Q9C0A0 1308 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 APAF1O14727 1248 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 RPS6KA4O75676 772 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 CANXP27824 592 aaKnown RBP7.61□□□□□ -1.19
CDH13-206ENST00000562601 SSFA2P28290 1259 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms