RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 DCAF8Q5TAQ9 597 aa12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 LDHDQ86WU2 507 aa12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 DNAJC5GQ8N7S2 189 aa12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 GGA1Q9UJY5 639 aa12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 LRRC37AA6NMS7 1700 aa12.05□□□□□ -0.48
NSMCE1-203ENST00000562039 E9PSI1 815 aa12.04□□□□□ -0.48
NSMCE1-203ENST00000562039 PSMD14O00487 310 aa12.04□□□□□ -0.48
NSMCE1-203ENST00000562039 ITGA6P23229 1130 aa12.04□□□□□ -0.48
NSMCE1-203ENST00000562039 EPHA10Q5JZY3 1008 aa12.04□□□□□ -0.48
NSMCE1-203ENST00000562039 RBM26Q5T8P6 1007 aaKnown RBP12.04□□□□□ -0.48
NSMCE1-203ENST00000562039 SSH1Q8WYL5 1049 aa12.04□□□□□ -0.48
NSMCE1-203ENST00000562039 CDC5LQ99459 802 aaKnown RBP12.04□□□□□ -0.48
NSMCE1-203ENST00000562039 MKRN1Q9UHC7 482 aaKnown RBP12.04□□□□□ -0.48
NSMCE1-203ENST00000562039 CACNA1FO60840 1977 aa12.03□□□□□ -0.48
NSMCE1-203ENST00000562039 CNTROBQ8N137 903 aa12.03□□□□□ -0.48
NSMCE1-203ENST00000562039 TRPM4Q8TD43 1214 aa12.03□□□□□ -0.48
NSMCE1-203ENST00000562039 ZNF594Q96JF6 807 aaPredicted RBP12.03□□□□□ -0.48
NSMCE1-203ENST00000562039 EYA3Q99504 573 aa12.03□□□□□ -0.48
NSMCE1-203ENST00000562039 ZC3H12CQ9C0D7 883 aaKnown RBP12.03□□□□□ -0.48
NSMCE1-203ENST00000562039 GPRC5DQ9NZD1 345 aa12.03□□□□□ -0.48
NSMCE1-203ENST00000562039 MYH3P11055 1940 aa12.03□□□□□ -0.48
NSMCE1-203ENST00000562039 SNAP23O00161 211 aa12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 TRAF5O00463 557 aa12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 IGHMBP2P38935 993 aaKnown RBP12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 TNIP1Q15025 636 aa12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 PNMA8AQ86V59 439 aaPredicted RBP12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 KLRG1Q96E93 195 aa12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 VPS33BQ9H267 617 aa12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 C9orf78Q9NZ63 289 aaPredicted RBP12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 CNOT7Q9UIV1 285 aaKnown RBP12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 MINPP1Q9UNW1 487 aa12.02□□□□□ -0.49
NSMCE1-203ENST00000562039 GRM8O00222 908 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 PLIN1O60240 522 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 ATP2B4P23634 1241 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 KLRK1P26718 216 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 FOXO4P98177 505 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 TBC1D10BQ4KMP7 808 aaPredicted RBP12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 LMBR1LQ6UX01 489 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 DLK2Q6UY11 383 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 SAMD7Q7Z3H4 446 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 SUCLG2Q96I99 432 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 MPHOSPH8Q99549 860 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 MXD3Q9BW11 206 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 SRCIN1Q9C0H9 1055 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 PODXL2Q9NZ53 605 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 XDHP47989 1333 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 RTL9Q8NET4 1388 aa12.01□□□□□ -0.49
NSMCE1-203ENST00000562039 SCN9AQ15858 1988 aa12□□□□□ -0.49
NSMCE1-203ENST00000562039 ANKRD18BA2A2Z9 1011 aa12□□□□□ -0.49
NSMCE1-203ENST00000562039 TAF5LO75529 589 aa12□□□□□ -0.49
NSMCE1-203ENST00000562039 EGFRP00533 1210 aa12□□□□□ -0.49
NSMCE1-203ENST00000562039 CSF1RP07333 972 aa12□□□□□ -0.49
NSMCE1-203ENST00000562039 CCT4P50991 539 aaKnown RBP12□□□□□ -0.49
NSMCE1-203ENST00000562039 HIRAP54198 1017 aaPredicted RBP12□□□□□ -0.49
NSMCE1-203ENST00000562039 TXNRD3Q86VQ6 643 aa12□□□□□ -0.49
NSMCE1-203ENST00000562039 PLA2G12BQ9BX93 195 aa12□□□□□ -0.49
NSMCE1-203ENST00000562039 GLIS2Q9BZE0 524 aaPredicted RBP12□□□□□ -0.49
NSMCE1-203ENST00000562039 ADARB2Q9NS39 739 aaKnown RBP12□□□□□ -0.49
NSMCE1-203ENST00000562039 BSDC1Q9NW68 430 aaPredicted RBP12□□□□□ -0.49
NSMCE1-203ENST00000562039 PASKQ96RG2 1323 aa12□□□□□ -0.49
NSMCE1-203ENST00000562039 H7C1D1 291 aa11.99□□□□□ -0.49
NSMCE1-203ENST00000562039 NBPF7P0C2Y1 421 aaPredicted RBP11.99□□□□□ -0.49
NSMCE1-203ENST00000562039 CHRNDQ07001 517 aa11.99□□□□□ -0.49
NSMCE1-203ENST00000562039 GRM1Q13255 1194 aa11.99□□□□□ -0.49
NSMCE1-203ENST00000562039 TAF7LQ5H9L4 462 aa11.99□□□□□ -0.49
NSMCE1-203ENST00000562039 USP50Q70EL3 339 aaPredicted RBP11.99□□□□□ -0.49
NSMCE1-203ENST00000562039 ZNF408Q9H9D4 720 aa11.99□□□□□ -0.49
NSMCE1-203ENST00000562039 ADAMTSL1Q8N6G6 1762 aa11.99□□□□□ -0.49
NSMCE1-203ENST00000562039 ASTN2O75129 1339 aaPredicted RBP11.98□□□□□ -0.49
NSMCE1-203ENST00000562039 ALDH1L1O75891 902 aa11.98□□□□□ -0.49
NSMCE1-203ENST00000562039 KCNJ4P48050 445 aa11.98□□□□□ -0.49
NSMCE1-203ENST00000562039 IFIT5Q13325 482 aaKnown RBP11.98□□□□□ -0.49
NSMCE1-203ENST00000562039 ZNF804BA4D1E1 1349 aa11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 TMEM88BA6NKF7 163 aa11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 HNRNPUQ00839 825 aaKnown RBP eCLIP11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 PAXIP1Q6ZW49 1069 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 TRMT2AQ8IZ69 625 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 KAZALD1Q96I82 304 aa11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 PUS3Q9BZE2 481 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 CNNM1Q9NRU3 951 aa11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 ABT1Q9ULW3 272 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 NOB1Q9ULX3 412 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 SCAF8Q9UPN6 1271 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 JAG2Q9Y219 1238 aa11.97□□□□□ -0.49
NSMCE1-203ENST00000562039 CCDC57Q2TAC2 916 aa11.96□□□□□ -0.49
NSMCE1-203ENST00000562039 USP48Q86UV5 1035 aa11.96□□□□□ -0.49
NSMCE1-203ENST00000562039 KLHDC4Q8TBB5 520 aa11.96□□□□□ -0.49
NSMCE1-203ENST00000562039 BICC1Q9H694 974 aaKnown RBP11.96□□□□□ -0.49
NSMCE1-203ENST00000562039 PTPRCP08575 1304 aa11.95□□□□□ -0.5
NSMCE1-203ENST00000562039 VIL1P09327 827 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-203ENST00000562039 ALDH1L2Q3SY69 923 aa11.95□□□□□ -0.5
NSMCE1-203ENST00000562039 RSBN1LQ6PCB5 846 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms