RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 EYA3Q99504 573 aa17.27■□□□□ 0.36
USB1-205ENST00000561743 MYH16Q9H6N6 1097 aa17.27■□□□□ 0.36
USB1-205ENST00000561743 MKRN1Q9UHC7 482 aaKnown RBP17.27■□□□□ 0.36
USB1-205ENST00000561743 CNTNAP1P78357 1384 aa17.27■□□□□ 0.35
USB1-205ENST00000561743 RTL9Q8NET4 1388 aa17.27■□□□□ 0.35
USB1-205ENST00000561743 A0A1B0GUL6 1792 aa17.26■□□□□ 0.35
USB1-205ENST00000561743 UFL1O94874 794 aa17.26■□□□□ 0.35
USB1-205ENST00000561743 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
USB1-205ENST00000561743 GREM2Q9H772 168 aa17.26■□□□□ 0.35
USB1-205ENST00000561743 ANKIB1Q9P2G1 1089 aa17.26■□□□□ 0.35
USB1-205ENST00000561743 ZNF646O15015 1829 aaPredicted RBP17.26■□□□□ 0.35
USB1-205ENST00000561743 PSMD14O00487 310 aa17.25■□□□□ 0.35
USB1-205ENST00000561743 ECE2O60344 883 aa17.25■□□□□ 0.35
USB1-205ENST00000561743 CASP7P55210 303 aa17.25■□□□□ 0.35
USB1-205ENST00000561743 DOK7Q18PE1 504 aa17.25■□□□□ 0.35
USB1-205ENST00000561743 LINS1Q8NG48 757 aa17.25■□□□□ 0.35
USB1-205ENST00000561743 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
USB1-205ENST00000561743 GGA1Q9UJY5 639 aa17.25■□□□□ 0.35
USB1-205ENST00000561743 SHTN1A0MZ66 631 aa17.24■□□□□ 0.35
USB1-205ENST00000561743 PLA2G12BQ9BX93 195 aa17.24■□□□□ 0.35
USB1-205ENST00000561743 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
USB1-205ENST00000561743 KCNQ5Q9NR82 932 aa17.24■□□□□ 0.35
USB1-205ENST00000561743 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
USB1-205ENST00000561743 XDHP47989 1333 aa17.23■□□□□ 0.35
USB1-205ENST00000561743 POLR2AP24928 1970 aaKnown RBP17.23■□□□□ 0.35
USB1-205ENST00000561743 F6X3S4 739 aa17.23■□□□□ 0.35
USB1-205ENST00000561743 FMR1Q06787 632 aaKnown RBP eCLIP17.23■□□□□ 0.35
USB1-205ENST00000561743 MICALL2Q8IY33 904 aa17.23■□□□□ 0.35
USB1-205ENST00000561743 CNOT7Q9UIV1 285 aaKnown RBP17.23■□□□□ 0.35
USB1-205ENST00000561743 TRAF5O00463 557 aa17.22■□□□□ 0.35
USB1-205ENST00000561743 HIRAP54198 1017 aaPredicted RBP17.22■□□□□ 0.35
USB1-205ENST00000561743 TRPM4Q8TD43 1214 aa17.22■□□□□ 0.35
USB1-205ENST00000561743 DPF2Q92785 391 aa17.22■□□□□ 0.35
USB1-205ENST00000561743 BSDC1Q9NW68 430 aaPredicted RBP17.22■□□□□ 0.35
USB1-205ENST00000561743 PGAP2Q9UHJ9 254 aa17.22■□□□□ 0.35
USB1-205ENST00000561743 HSPA1AP0DMV8 641 aaKnown RBP17.21■□□□□ 0.35
USB1-205ENST00000561743 HSPA1BP0DMV9 641 aaKnown RBP17.21■□□□□ 0.35
USB1-205ENST00000561743 BEND3Q5T5X7 828 aa17.21■□□□□ 0.35
USB1-205ENST00000561743 IFFO2Q5TF58 517 aa17.21■□□□□ 0.35
USB1-205ENST00000561743 THSD7BQ9C0I4 1608 aa17.21■□□□□ 0.35
USB1-205ENST00000561743 WTIPA6NIX2 430 aaPredicted RBP17.2■□□□□ 0.34
USB1-205ENST00000561743 RASSF10A6NK89 507 aa17.2■□□□□ 0.34
USB1-205ENST00000561743 CSF1RP07333 972 aa17.2■□□□□ 0.34
USB1-205ENST00000561743 ATP2B4P23634 1241 aa17.2■□□□□ 0.34
USB1-205ENST00000561743 RPS12P25398 132 aaKnown RBP17.2■□□□□ 0.34
USB1-205ENST00000561743 FAM161AQ3B820 660 aa17.2■□□□□ 0.34
USB1-205ENST00000561743 ZC3H15Q8WU90 426 aaKnown RBP17.2■□□□□ 0.34
USB1-205ENST00000561743 MINPP1Q9UNW1 487 aa17.2■□□□□ 0.34
USB1-205ENST00000561743 ZNF609O15014 1411 aa17.2■□□□□ 0.34
USB1-205ENST00000561743 H7C1D1 291 aa17.19■□□□□ 0.34
USB1-205ENST00000561743 VIL1P09327 827 aaKnown RBP17.19■□□□□ 0.34
USB1-205ENST00000561743 ITGA6P23229 1130 aa17.19■□□□□ 0.34
USB1-205ENST00000561743 VEGFBP49765 207 aa17.19■□□□□ 0.34
USB1-205ENST00000561743 CST9Q5W186 159 aa17.19■□□□□ 0.34
USB1-205ENST00000561743 SAMD7Q7Z3H4 446 aa17.19■□□□□ 0.34
USB1-205ENST00000561743 ABT1Q9ULW3 272 aaKnown RBP17.19■□□□□ 0.34
USB1-205ENST00000561743 MED23Q9ULK4 1368 aa17.18■□□□□ 0.34
USB1-205ENST00000561743 G3V3G9 751 aa17.18■□□□□ 0.34
USB1-205ENST00000561743 EGFRP00533 1210 aa17.18■□□□□ 0.34
USB1-205ENST00000561743 IGHMBP2P38935 993 aaKnown RBP17.18■□□□□ 0.34
USB1-205ENST00000561743 DEFB115Q30KQ5 88 aa17.18■□□□□ 0.34
USB1-205ENST00000561743 DCAF8Q5TAQ9 597 aa17.18■□□□□ 0.34
USB1-205ENST00000561743 GLIS2Q9BZE0 524 aaPredicted RBP17.18■□□□□ 0.34
USB1-205ENST00000561743 CCT4P50991 539 aaKnown RBP17.17■□□□□ 0.34
USB1-205ENST00000561743 FOXO4P98177 505 aa17.17■□□□□ 0.34
USB1-205ENST00000561743 TBC1D10BQ4KMP7 808 aaPredicted RBP17.17■□□□□ 0.34
USB1-205ENST00000561743 COL13A1Q5TAT6 717 aaPredicted RBP17.17■□□□□ 0.34
USB1-205ENST00000561743 E9PSI1 815 aa17.15■□□□□ 0.34
USB1-205ENST00000561743 RSBN1LQ6PCB5 846 aaPredicted RBP17.15■□□□□ 0.34
USB1-205ENST00000561743 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
USB1-205ENST00000561743 MPHOSPH8Q99549 860 aa17.15■□□□□ 0.34
USB1-205ENST00000561743 ANKRD18BA2A2Z9 1011 aa17.14■□□□□ 0.33
USB1-205ENST00000561743 GRM8O00222 908 aa17.14■□□□□ 0.33
USB1-205ENST00000561743 CELF2O95319 508 aaKnown RBP17.14■□□□□ 0.33
USB1-205ENST00000561743 SLFN5Q08AF3 891 aa17.14■□□□□ 0.33
USB1-205ENST00000561743 KIF4BQ2VIQ3 1234 aa17.14■□□□□ 0.33
USB1-205ENST00000561743 EPHA10Q5JZY3 1008 aa17.14■□□□□ 0.33
USB1-205ENST00000561743 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
USB1-205ENST00000561743 CDC37L1Q7L3B6 337 aa17.14■□□□□ 0.33
USB1-205ENST00000561743 TXNRD3Q86VQ6 643 aa17.14■□□□□ 0.33
USB1-205ENST00000561743 LEMD3Q9Y2U8 911 aa17.14■□□□□ 0.33
USB1-205ENST00000561743 TLL2Q9Y6L7 1015 aa17.14■□□□□ 0.33
USB1-205ENST00000561743 WDR33Q9C0J8 1336 aaKnown RBP17.14■□□□□ 0.33
USB1-205ENST00000561743 ALDH1L1O75891 902 aa17.13■□□□□ 0.33
USB1-205ENST00000561743 KLRK1P26718 216 aa17.13■□□□□ 0.33
USB1-205ENST00000561743 ZNF280AP59817 542 aaPredicted RBP17.13■□□□□ 0.33
USB1-205ENST00000561743 CHRNDQ07001 517 aa17.13■□□□□ 0.33
USB1-205ENST00000561743 RBM26Q5T8P6 1007 aaKnown RBP17.13■□□□□ 0.33
USB1-205ENST00000561743 MRPL50Q8N5N7 158 aaKnown RBP17.13■□□□□ 0.33
USB1-205ENST00000561743 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
USB1-205ENST00000561743 GMLQ99445 158 aa17.13■□□□□ 0.33
USB1-205ENST00000561743 SRCIN1Q9C0H9 1055 aa17.13■□□□□ 0.33
USB1-205ENST00000561743 ANKRD2Q9GZV1 360 aa17.13■□□□□ 0.33
USB1-205ENST00000561743 ZNF804BA4D1E1 1349 aa17.13■□□□□ 0.33
USB1-205ENST00000561743 USP17L3A6NCW0 530 aa17.12■□□□□ 0.33
USB1-205ENST00000561743 USP17L4A6NCW7 530 aa17.12■□□□□ 0.33
USB1-205ENST00000561743 IFIT5Q13325 482 aaKnown RBP17.12■□□□□ 0.33
USB1-205ENST00000561743 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
USB1-205ENST00000561743 USP17L1Q7RTZ2 530 aa17.12■□□□□ 0.33
USB1-205ENST00000561743 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms