RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 KIF1BPQ96EK5 621 aa15.66■□□□□ 0.1
CMTM4-203ENST00000561680 MPHOSPH8Q99549 860 aa15.66■□□□□ 0.1
CMTM4-203ENST00000561680 BSDC1Q9NW68 430 aaPredicted RBP15.66■□□□□ 0.1
CMTM4-203ENST00000561680 RIPOR2Q9Y4F9 1068 aa15.66■□□□□ 0.1
CMTM4-203ENST00000561680 ZNF609O15014 1411 aa15.66■□□□□ 0.1
CMTM4-203ENST00000561680 CHD4Q14839 1912 aa15.66■□□□□ 0.1
CMTM4-203ENST00000561680 MYH7P12883 1935 aa15.65■□□□□ 0.1
CMTM4-203ENST00000561680 APBB1O00213 710 aa15.65■□□□□ 0.1
CMTM4-203ENST00000561680 LRRCC1Q9C099 1032 aa15.65■□□□□ 0.1
CMTM4-203ENST00000561680 CNNM1Q9NRU3 951 aa15.65■□□□□ 0.1
CMTM4-203ENST00000561680 CD2APQ9Y5K6 639 aa15.65■□□□□ 0.1
CMTM4-203ENST00000561680 CHRNA5P30532 468 aa15.64■□□□□ 0.09
CMTM4-203ENST00000561680 TGFB2P61812 414 aa15.64■□□□□ 0.09
CMTM4-203ENST00000561680 MYO5AQ9Y4I1 1855 aaKnown RBP15.64■□□□□ 0.09
CMTM4-203ENST00000561680 MROH5Q6ZUA9 1318 aa15.64■□□□□ 0.09
CMTM4-203ENST00000561680 DUOX1Q9NRD9 1551 aa15.63■□□□□ 0.09
CMTM4-203ENST00000561680 SMARCA5O60264 1052 aaPredicted RBP15.63■□□□□ 0.09
CMTM4-203ENST00000561680 BBOX1O75936 387 aa15.63■□□□□ 0.09
CMTM4-203ENST00000561680 ALDH1B1P30837 517 aa15.63■□□□□ 0.09
CMTM4-203ENST00000561680 ANKRD45Q5TZF3 282 aa15.63■□□□□ 0.09
CMTM4-203ENST00000561680 TMC4Q7Z404 712 aa15.63■□□□□ 0.09
CMTM4-203ENST00000561680 CHD1LQ86WJ1 897 aa15.63■□□□□ 0.09
CMTM4-203ENST00000561680 VGLL2Q8N8G2 317 aa15.63■□□□□ 0.09
CMTM4-203ENST00000561680 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.63■□□□□ 0.09
CMTM4-203ENST00000561680 PSME4Q14997 1843 aa15.62■□□□□ 0.09
CMTM4-203ENST00000561680 PPEF1O14829 653 aaPredicted RBP15.62■□□□□ 0.09
CMTM4-203ENST00000561680 DPEP1P16444 411 aa15.62■□□□□ 0.09
CMTM4-203ENST00000561680 KCNA3P22001 575 aa15.62■□□□□ 0.09
CMTM4-203ENST00000561680 TFCP2Q12800 502 aa15.62■□□□□ 0.09
CMTM4-203ENST00000561680 METTL24Q5JXM2 366 aa15.62■□□□□ 0.09
CMTM4-203ENST00000561680 CNKSR1Q969H4 720 aa15.62■□□□□ 0.09
CMTM4-203ENST00000561680 ZNF622Q969S3 477 aaKnown RBP eCLIP15.62■□□□□ 0.09
CMTM4-203ENST00000561680 LNPKQ9C0E8 428 aa15.62■□□□□ 0.09
CMTM4-203ENST00000561680 MINPP1Q9UNW1 487 aa15.62■□□□□ 0.09
CMTM4-203ENST00000561680 DICER1Q9UPY3 1922 aaKnown RBP15.61■□□□□ 0.09
CMTM4-203ENST00000561680 CHRNDQ07001 517 aa15.61■□□□□ 0.09
CMTM4-203ENST00000561680 IL1RAPL2Q9NP60 686 aa15.61■□□□□ 0.09
CMTM4-203ENST00000561680 GPR108Q9NPR9 543 aa15.61■□□□□ 0.09
CMTM4-203ENST00000561680 CEP126Q9P2H0 1117 aa15.61■□□□□ 0.09
CMTM4-203ENST00000561680 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
CMTM4-203ENST00000561680 SBF1O95248 1867 aa15.61■□□□□ 0.09
CMTM4-203ENST00000561680 A0A0G2JLW4 131 aa15.6■□□□□ 0.09
CMTM4-203ENST00000561680 PRPF40BQ6NWY9 871 aaKnown RBP15.6■□□□□ 0.09
CMTM4-203ENST00000561680 CLASRPQ8N2M8 674 aaKnown RBP15.6■□□□□ 0.09
CMTM4-203ENST00000561680 SNED1Q8TER0 1413 aa15.6■□□□□ 0.09
CMTM4-203ENST00000561680 ZNF646O15015 1829 aaPredicted RBP15.59■□□□□ 0.09
CMTM4-203ENST00000561680 DOCK2Q92608 1830 aa15.59■□□□□ 0.09
CMTM4-203ENST00000561680 PDE8BO95263 885 aa15.59■□□□□ 0.09
CMTM4-203ENST00000561680 PDE4AP27815 886 aa15.59■□□□□ 0.09
CMTM4-203ENST00000561680 TNNI3KQ59H18 835 aa15.59■□□□□ 0.09
CMTM4-203ENST00000561680 SLC51AQ86UW1 340 aa15.59■□□□□ 0.09
CMTM4-203ENST00000561680 SP8Q8IXZ3 490 aa15.59■□□□□ 0.09
CMTM4-203ENST00000561680 KLHL34Q8N239 644 aa15.59■□□□□ 0.09
CMTM4-203ENST00000561680 PPP1R1BQ9UD71 204 aaPredicted RBP15.59■□□□□ 0.09
CMTM4-203ENST00000561680 ATP6V0A2Q9Y487 856 aa15.59■□□□□ 0.09
CMTM4-203ENST00000561680 FPGT-TNNI3KV9GXZ4 949 aa15.59■□□□□ 0.09
CMTM4-203ENST00000561680 SALL3Q9BXA9 1300 aa15.59■□□□□ 0.09
CMTM4-203ENST00000561680 PUM3Q15397 648 aaKnown RBP15.58■□□□□ 0.08
CMTM4-203ENST00000561680 TTLL6Q8N841 843 aa15.58■□□□□ 0.08
CMTM4-203ENST00000561680 HELBQ8NG08 1087 aaPredicted RBP15.58■□□□□ 0.08
CMTM4-203ENST00000561680 EAF2Q96CJ1 260 aaPredicted RBP15.58■□□□□ 0.08
CMTM4-203ENST00000561680 ANKRD2Q9GZV1 360 aa15.58■□□□□ 0.08
CMTM4-203ENST00000561680 AKAP2Q9Y2D5 859 aa15.58■□□□□ 0.08
CMTM4-203ENST00000561680 XDHP47989 1333 aa15.58■□□□□ 0.08
CMTM4-203ENST00000561680 TAF5LO75529 589 aa15.57■□□□□ 0.08
CMTM4-203ENST00000561680 FGFR2P21802 821 aa15.57■□□□□ 0.08
CMTM4-203ENST00000561680 ATP2B3Q16720 1220 aa15.57■□□□□ 0.08
CMTM4-203ENST00000561680 AACSQ86V21 672 aa15.57■□□□□ 0.08
CMTM4-203ENST00000561680 NLGN2Q8NFZ4 835 aa15.57■□□□□ 0.08
CMTM4-203ENST00000561680 C7orf43Q8WVR3 580 aa15.57■□□□□ 0.08
CMTM4-203ENST00000561680 FHDC1Q9C0D6 1143 aaPredicted RBP15.57■□□□□ 0.08
CMTM4-203ENST00000561680 PIM2Q9P1W9 311 aa15.57■□□□□ 0.08
CMTM4-203ENST00000561680 A0A1B0GUL7 405 aa15.56■□□□□ 0.08
CMTM4-203ENST00000561680 SKAP1Q86WV1 359 aa15.56■□□□□ 0.08
CMTM4-203ENST00000561680 C16orf71Q8IYS4 520 aaPredicted RBP15.56■□□□□ 0.08
CMTM4-203ENST00000561680 OTUD7AQ8TE49 926 aaPredicted RBP15.56■□□□□ 0.08
CMTM4-203ENST00000561680 PODXL2Q9NZ53 605 aa15.56■□□□□ 0.08
CMTM4-203ENST00000561680 SCN9AQ15858 1988 aa15.56■□□□□ 0.08
CMTM4-203ENST00000561680 IFIT2P09913 472 aaKnown RBP15.55■□□□□ 0.08
CMTM4-203ENST00000561680 SLC5A1P13866 664 aa15.55■□□□□ 0.08
CMTM4-203ENST00000561680 GPSM2P81274 684 aa15.55■□□□□ 0.08
CMTM4-203ENST00000561680 UBE4AQ14139 1066 aa15.55■□□□□ 0.08
CMTM4-203ENST00000561680 PLEKHM2Q8IWE5 1019 aa15.55■□□□□ 0.08
CMTM4-203ENST00000561680 LPIN2Q92539 896 aa15.55■□□□□ 0.08
CMTM4-203ENST00000561680 TLR7Q9NYK1 1049 aaKnown RBP15.55■□□□□ 0.08
CMTM4-203ENST00000561680 ANKIB1Q9P2G1 1089 aa15.55■□□□□ 0.08
CMTM4-203ENST00000561680 DBNLQ9UJU6 430 aaKnown RBP15.55■□□□□ 0.08
CMTM4-203ENST00000561680 AOX1Q06278 1338 aa15.54■□□□□ 0.08
CMTM4-203ENST00000561680 IRS2Q9Y4H2 1338 aa15.54■□□□□ 0.08
CMTM4-203ENST00000561680 SNAP23O00161 211 aa15.54■□□□□ 0.08
CMTM4-203ENST00000561680 MX1P20591 662 aa15.54■□□□□ 0.08
CMTM4-203ENST00000561680 TIMM10P62072 90 aa15.54■□□□□ 0.08
CMTM4-203ENST00000561680 CC2D2BQ6DHV5 1058 aa15.54■□□□□ 0.08
CMTM4-203ENST00000561680 OLFM4Q6UX06 510 aa15.54■□□□□ 0.08
CMTM4-203ENST00000561680 CCDC8Q9H0W5 538 aaPredicted RBP15.54■□□□□ 0.08
CMTM4-203ENST00000561680 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
CMTM4-203ENST00000561680 LEMD3Q9Y2U8 911 aa15.54■□□□□ 0.08
CMTM4-203ENST00000561680 ZNF804BA4D1E1 1349 aa15.53■□□□□ 0.08
CMTM4-203ENST00000561680 IFIT1P09914 478 aaKnown RBP15.53■□□□□ 0.08
CMTM4-203ENST00000561680 ATP2B4P23634 1241 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms