RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 LNPKQ9C0E8 428 aa9.33□□□□□ -0.92
TPM1-231ENST00000561395 BCL2L12Q9HB09 334 aa9.33□□□□□ -0.92
TPM1-231ENST00000561395 C9orf78Q9NZ63 289 aaPredicted RBP9.33□□□□□ -0.92
TPM1-231ENST00000561395 HACL1Q9UJ83 578 aa9.33□□□□□ -0.92
TPM1-231ENST00000561395 TSKSQ9UJT2 592 aa9.33□□□□□ -0.92
TPM1-231ENST00000561395 HDAC5Q9UQL6 1122 aa9.33□□□□□ -0.92
TPM1-231ENST00000561395 ZNF541Q9H0D2 1346 aa9.32□□□□□ -0.92
TPM1-231ENST00000561395 EPHX2P34913 555 aa9.32□□□□□ -0.92
TPM1-231ENST00000561395 GRM1Q13255 1194 aa9.32□□□□□ -0.92
TPM1-231ENST00000561395 MTX1Q13505 466 aa9.32□□□□□ -0.92
TPM1-231ENST00000561395 GCKRQ14397 625 aa9.32□□□□□ -0.92
TPM1-231ENST00000561395 C8orf34Q49A92 452 aa9.32□□□□□ -0.92
TPM1-231ENST00000561395 BICDL1Q6ZP65 573 aa9.32□□□□□ -0.92
TPM1-231ENST00000561395 PAXIP1Q6ZW49 1069 aaPredicted RBP9.32□□□□□ -0.92
TPM1-231ENST00000561395 NPM2Q86SE8 214 aaKnown RBP9.32□□□□□ -0.92
TPM1-231ENST00000561395 CNTROBQ8N137 903 aa9.32□□□□□ -0.92
TPM1-231ENST00000561395 SSH3Q8TE77 659 aa9.32□□□□□ -0.92
TPM1-231ENST00000561395 CAPNS2Q96L46 248 aa9.32□□□□□ -0.92
TPM1-231ENST00000561395 NUP98P52948 1817 aa9.32□□□□□ -0.92
TPM1-231ENST00000561395 PDE6BP35913 854 aa9.31□□□□□ -0.92
TPM1-231ENST00000561395 ECE1P42892 770 aa9.31□□□□□ -0.92
TPM1-231ENST00000561395 CYP4F22Q6NT55 531 aa9.31□□□□□ -0.92
TPM1-231ENST00000561395 KIF6Q6ZMV9 814 aa9.31□□□□□ -0.92
TPM1-231ENST00000561395 PPP1R42Q7Z4L9 355 aa9.31□□□□□ -0.92
TPM1-231ENST00000561395 SUCLG2Q96I99 432 aa9.31□□□□□ -0.92
TPM1-231ENST00000561395 ZBTB3Q9H5J0 574 aa9.31□□□□□ -0.92
TPM1-231ENST00000561395 ZBTB1Q9Y2K1 713 aa9.31□□□□□ -0.92
TPM1-231ENST00000561395 SRGAP3O43295 1099 aa9.3□□□□□ -0.92
TPM1-231ENST00000561395 IL6STP40189 918 aaPredicted RBP9.3□□□□□ -0.92
TPM1-231ENST00000561395 SOGA3Q5TF21 947 aa9.3□□□□□ -0.92
TPM1-231ENST00000561395 PRPF40BQ6NWY9 871 aaKnown RBP9.3□□□□□ -0.92
TPM1-231ENST00000561395 PNMA8AQ86V59 439 aaPredicted RBP9.3□□□□□ -0.92
TPM1-231ENST00000561395 IFNLR1Q8IU57 520 aaPredicted RBP9.3□□□□□ -0.92
TPM1-231ENST00000561395 CCDC24Q8N4L8 307 aa9.3□□□□□ -0.92
TPM1-231ENST00000561395 KAZALD1Q96I82 304 aa9.3□□□□□ -0.92
TPM1-231ENST00000561395 GPR101Q96P66 508 aaPredicted RBP9.3□□□□□ -0.92
TPM1-231ENST00000561395 BRIP1Q9BX63 1249 aa9.3□□□□□ -0.92
TPM1-231ENST00000561395 BICC1Q9H694 974 aaKnown RBP9.3□□□□□ -0.92
TPM1-231ENST00000561395 MAP3K15Q6ZN16 1313 aa9.3□□□□□ -0.92
TPM1-231ENST00000561395 ATP5J2-PTCD1G3V325 749 aa9.29□□□□□ -0.92
TPM1-231ENST00000561395 CASP7P55210 303 aa9.29□□□□□ -0.92
TPM1-231ENST00000561395 DGKZQ13574 1117 aa9.29□□□□□ -0.92
TPM1-231ENST00000561395 PRPF38BQ5VTL8 546 aaKnown RBP9.29□□□□□ -0.92
TPM1-231ENST00000561395 PRR5LQ6MZQ0 368 aa9.29□□□□□ -0.92
TPM1-231ENST00000561395 CCDC191Q8NCU4 936 aa9.29□□□□□ -0.92
TPM1-231ENST00000561395 CNKSR1Q969H4 720 aa9.29□□□□□ -0.92
TPM1-231ENST00000561395 ISCA1Q9BUE6 129 aa9.29□□□□□ -0.92
TPM1-231ENST00000561395 CWC25Q9NXE8 425 aaPredicted RBP9.29□□□□□ -0.92
TPM1-231ENST00000561395 ZBTB47Q9UFB7 747 aaPredicted RBP9.29□□□□□ -0.92
TPM1-231ENST00000561395 EXOC6BQ9Y2D4 811 aa9.29□□□□□ -0.92
TPM1-231ENST00000561395 ZNF330Q9Y3S2 320 aaPredicted RBP9.29□□□□□ -0.92
TPM1-231ENST00000561395 A0A087WZG4 1122 aa9.28□□□□□ -0.92
TPM1-231ENST00000561395 APBB1O00213 710 aa9.28□□□□□ -0.92
TPM1-231ENST00000561395 SMARCA5O60264 1052 aaPredicted RBP9.28□□□□□ -0.92
TPM1-231ENST00000561395 AOC2O75106 756 aa9.28□□□□□ -0.92
TPM1-231ENST00000561395 RAB11FIP3O75154 756 aa9.28□□□□□ -0.92
TPM1-231ENST00000561395 FMR1Q06787 632 aaKnown RBP eCLIP9.28□□□□□ -0.92
TPM1-231ENST00000561395 TRIM28Q13263 835 aaKnown RBP9.28□□□□□ -0.92
TPM1-231ENST00000561395 TBC1D9BQ66K14 1250 aa9.28□□□□□ -0.92
TPM1-231ENST00000561395 STYK1Q6J9G0 422 aa9.28□□□□□ -0.92
TPM1-231ENST00000561395 GIGYF2Q6Y7W6 1299 aaKnown RBP9.28□□□□□ -0.92
TPM1-231ENST00000561395 UBE3BQ7Z3V4 1068 aa9.28□□□□□ -0.92
TPM1-231ENST00000561395 PLEKHM2Q8IWE5 1019 aa9.28□□□□□ -0.92
TPM1-231ENST00000561395 LRRCC1Q9C099 1032 aa9.28□□□□□ -0.92
TPM1-231ENST00000561395 POLR2AP24928 1970 aaKnown RBP9.28□□□□□ -0.92
TPM1-231ENST00000561395 LAMB2P55268 1798 aa9.27□□□□□ -0.92
TPM1-231ENST00000561395 MYH3P11055 1940 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 COL4A5P29400 1685 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 ERVV-1B6SEH8 477 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 H7C1W4 665 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 NPHP1O15259 732 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 CA12O43570 354 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 SRGNP10124 158 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 MAP2K2P36507 400 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 EIF5P55010 431 aaKnown RBP9.27□□□□□ -0.93
TPM1-231ENST00000561395 SOX10P56693 466 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 TCIRG1Q13488 830 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 RABL6Q3YEC7 729 aaPredicted RBP9.27□□□□□ -0.93
TPM1-231ENST00000561395 CCDC93Q567U6 631 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 HSP90AB3PQ58FF7 597 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 BMP2KLQ5H9B9 411 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 EPHA10Q5JZY3 1008 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 ZNF277Q9NRM2 450 aaPredicted RBP9.27□□□□□ -0.93
TPM1-231ENST00000561395 NOP58Q9Y2X3 529 aaKnown RBP9.27□□□□□ -0.93
TPM1-231ENST00000561395 SALL3Q9BXA9 1300 aa9.27□□□□□ -0.93
TPM1-231ENST00000561395 SURF6O75683 361 aaKnown RBP9.26□□□□□ -0.93
TPM1-231ENST00000561395 FKBP4Q02790 459 aaKnown RBP eCLIP9.26□□□□□ -0.93
TPM1-231ENST00000561395 HLFQ16534 295 aa9.26□□□□□ -0.93
TPM1-231ENST00000561395 HSP90AB4PQ58FF6 505 aa9.26□□□□□ -0.93
TPM1-231ENST00000561395 DZIP3Q86Y13 1208 aaKnown RBP9.26□□□□□ -0.93
TPM1-231ENST00000561395 CNBD1Q8NA66 436 aa9.26□□□□□ -0.93
TPM1-231ENST00000561395 OTUD7AQ8TE49 926 aaPredicted RBP9.26□□□□□ -0.93
TPM1-231ENST00000561395 MASTLQ96GX5 879 aa9.26□□□□□ -0.93
TPM1-231ENST00000561395 TLL2Q9Y6L7 1015 aa9.26□□□□□ -0.93
TPM1-231ENST00000561395 TRAF5O00463 557 aa9.25□□□□□ -0.93
TPM1-231ENST00000561395 ST5P78524 1137 aa9.25□□□□□ -0.93
TPM1-231ENST00000561395 FOXO4P98177 505 aa9.25□□□□□ -0.93
TPM1-231ENST00000561395 CST9Q5W186 159 aa9.25□□□□□ -0.93
TPM1-231ENST00000561395 NLRP10Q86W26 655 aa9.25□□□□□ -0.93
TPM1-231ENST00000561395 ERC1Q8IUD2 1116 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms