RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 CACTIN-AS1Q8N1I8 211 aa9.89□□□□□ -0.83
HMBOX1-216ENST00000561377 OR13H1Q8NG92 308 aa9.89□□□□□ -0.83
HMBOX1-216ENST00000561377 TTC39BQ5VTQ0 682 aaPredicted RBP9.88□□□□□ -0.83
HMBOX1-216ENST00000561377 GDF6Q6KF10 455 aaPredicted RBP9.88□□□□□ -0.83
HMBOX1-216ENST00000561377 IGF2-ASQ6U949 168 aa9.88□□□□□ -0.83
HMBOX1-216ENST00000561377 CCDC82Q8N4S0 544 aa9.88□□□□□ -0.83
HMBOX1-216ENST00000561377 SPACA7Q96KW9 195 aa9.88□□□□□ -0.83
HMBOX1-216ENST00000561377 SRA1Q9HD15 236 aaKnown RBP9.88□□□□□ -0.83
HMBOX1-216ENST00000561377 H2AFB1P0C5Y9 115 aa9.87□□□□□ -0.83
HMBOX1-216ENST00000561377 H2AFB2P0C5Z0 115 aa9.87□□□□□ -0.83
HMBOX1-216ENST00000561377 HYAL2Q12891 473 aa9.87□□□□□ -0.83
HMBOX1-216ENST00000561377 IL22RA1Q8N6P7 574 aa9.87□□□□□ -0.83
HMBOX1-216ENST00000561377 DCAF11Q8TEB1 546 aa9.87□□□□□ -0.83
HMBOX1-216ENST00000561377 SEPT3Q9UH03 358 aa9.87□□□□□ -0.83
HMBOX1-216ENST00000561377 ZBTB39O15060 712 aa9.86□□□□□ -0.83
HMBOX1-216ENST00000561377 PPP1R15AO75807 674 aaPredicted RBP9.86□□□□□ -0.83
HMBOX1-216ENST00000561377 ZMYM1Q5SVZ6 1142 aa9.86□□□□□ -0.83
HMBOX1-216ENST00000561377 XP32Q5T750 250 aa9.86□□□□□ -0.83
HMBOX1-216ENST00000561377 MAP4K3Q8IVH8 894 aa9.86□□□□□ -0.83
HMBOX1-216ENST00000561377 Q8N3U1 123 aa9.86□□□□□ -0.83
HMBOX1-216ENST00000561377 WFDC12Q8WWY7 111 aa9.86□□□□□ -0.83
HMBOX1-216ENST00000561377 TP53INP1Q96A56 240 aa9.86□□□□□ -0.83
HMBOX1-216ENST00000561377 ABI2Q9NYB9 513 aaPredicted RBP9.86□□□□□ -0.83
HMBOX1-216ENST00000561377 DEAF1O75398 565 aaPredicted RBP9.85□□□□□ -0.83
HMBOX1-216ENST00000561377 RPLP1P05386 114 aaKnown RBP9.85□□□□□ -0.83
HMBOX1-216ENST00000561377 SCNN1AP37088 669 aa9.85□□□□□ -0.83
HMBOX1-216ENST00000561377 HELQQ8TDG4 1101 aa9.85□□□□□ -0.83
HMBOX1-216ENST00000561377 MUC3BQ9H195 1237 aa9.85□□□□□ -0.83
HMBOX1-216ENST00000561377 DLL1O00548 723 aa9.84□□□□□ -0.83
HMBOX1-216ENST00000561377 PDE12Q6L8Q7 609 aaKnown RBP9.84□□□□□ -0.83
HMBOX1-216ENST00000561377 SSBP4Q9BWG4 385 aaPredicted RBP9.84□□□□□ -0.83
HMBOX1-216ENST00000561377 PCSK2P16519 638 aa9.83□□□□□ -0.84
HMBOX1-216ENST00000561377 IREB2P48200 963 aaKnown RBP9.83□□□□□ -0.84
HMBOX1-216ENST00000561377 NUDT16Q96DE0 195 aaKnown RBP9.83□□□□□ -0.84
HMBOX1-216ENST00000561377 TRIM33Q9UPN9 1127 aa9.83□□□□□ -0.84
HMBOX1-216ENST00000561377 SMNDC1O75940 238 aaKnown RBP eCLIP9.82□□□□□ -0.84
HMBOX1-216ENST00000561377 KIF4AO95239 1232 aa9.82□□□□□ -0.84
HMBOX1-216ENST00000561377 NOS3P29474 1203 aa9.82□□□□□ -0.84
HMBOX1-216ENST00000561377 PRSS36Q5K4E3 855 aa9.82□□□□□ -0.84
HMBOX1-216ENST00000561377 COL13A1Q5TAT6 717 aaPredicted RBP9.82□□□□□ -0.84
HMBOX1-216ENST00000561377 MRPL18Q9H0U6 180 aaKnown RBP9.82□□□□□ -0.84
HMBOX1-216ENST00000561377 NOM1Q5C9Z4 860 aaKnown RBP9.81□□□□□ -0.84
HMBOX1-216ENST00000561377 CEP135Q66GS9 1140 aa9.81□□□□□ -0.84
HMBOX1-216ENST00000561377 ZNF438Q7Z4V0 828 aa9.81□□□□□ -0.84
HMBOX1-216ENST00000561377 ATCAYQ86WG3 371 aa9.81□□□□□ -0.84
HMBOX1-216ENST00000561377 ELP3Q9H9T3 547 aa9.81□□□□□ -0.84
HMBOX1-216ENST00000561377 PPME1Q9Y570 386 aa9.81□□□□□ -0.84
HMBOX1-216ENST00000561377 TMEM88BA6NKF7 163 aa9.8□□□□□ -0.84
HMBOX1-216ENST00000561377 SSFA2P28290 1259 aa9.8□□□□□ -0.84
HMBOX1-216ENST00000561377 TTC16Q8NEE8 873 aa9.8□□□□□ -0.84
HMBOX1-216ENST00000561377 ATP11AP98196 1134 aa9.79□□□□□ -0.84
HMBOX1-216ENST00000561377 SETDB1Q15047 1291 aa9.79□□□□□ -0.84
HMBOX1-216ENST00000561377 NCAPG2Q86XI2 1143 aa9.79□□□□□ -0.84
HMBOX1-216ENST00000561377 EDEM1Q92611 657 aa9.79□□□□□ -0.84
HMBOX1-216ENST00000561377 AKTIPQ9H8T0 292 aa9.79□□□□□ -0.84
HMBOX1-216ENST00000561377 CYP2E1P05181 493 aaPredicted RBP9.78□□□□□ -0.84
HMBOX1-216ENST00000561377 DNM1Q05193 864 aaKnown RBP9.78□□□□□ -0.84
HMBOX1-216ENST00000561377 ALKBH2Q6NS38 261 aa9.78□□□□□ -0.84
HMBOX1-216ENST00000561377 XKR5Q6UX68 686 aa9.78□□□□□ -0.84
HMBOX1-216ENST00000561377 TMEM130Q8N3G9 435 aa9.78□□□□□ -0.84
HMBOX1-216ENST00000561377 GTF3C2Q8WUA4 911 aaPredicted RBP9.78□□□□□ -0.84
HMBOX1-216ENST00000561377 MEGF10Q96KG7 1140 aa9.78□□□□□ -0.84
HMBOX1-216ENST00000561377 LACRTQ9GZZ8 138 aa9.78□□□□□ -0.84
HMBOX1-216ENST00000561377 RASSF4Q9H2L5 321 aa9.78□□□□□ -0.84
HMBOX1-216ENST00000561377 TMEM63CQ9P1W3 806 aa9.78□□□□□ -0.84
HMBOX1-216ENST00000561377 MTMR7Q9Y216 660 aa9.78□□□□□ -0.84
HMBOX1-216ENST00000561377 SCO2A0A1W2PP80 73 aa9.77□□□□□ -0.85
HMBOX1-216ENST00000561377 FAM177BA6PVY3 158 aa9.77□□□□□ -0.85
HMBOX1-216ENST00000561377 MPSTP25325 297 aa9.77□□□□□ -0.85
HMBOX1-216ENST00000561377 MZF1P28698 734 aaPredicted RBP9.77□□□□□ -0.85
HMBOX1-216ENST00000561377 CDC27P30260 824 aa9.77□□□□□ -0.85
HMBOX1-216ENST00000561377 PBX4Q9BYU1 374 aa9.77□□□□□ -0.85
HMBOX1-216ENST00000561377 LINC01387J3KSC0 135 aa9.76□□□□□ -0.85
HMBOX1-216ENST00000561377 PDGFAP04085 211 aa9.76□□□□□ -0.85
HMBOX1-216ENST00000561377 EIF1AXP47813 144 aaKnown RBP9.76□□□□□ -0.85
HMBOX1-216ENST00000561377 C14orf37Q86TY3 774 aa9.76□□□□□ -0.85
HMBOX1-216ENST00000561377 CEP120Q8N960 986 aa9.76□□□□□ -0.85
HMBOX1-216ENST00000561377 C1orf115Q9H7X2 142 aa9.76□□□□□ -0.85
HMBOX1-216ENST00000561377 F8W735 103 aaPredicted RBP9.75□□□□□ -0.85
HMBOX1-216ENST00000561377 C8orf34Q49A92 452 aa9.75□□□□□ -0.85
HMBOX1-216ENST00000561377 FAM117BQ6P1L5 589 aa9.75□□□□□ -0.85
HMBOX1-216ENST00000561377 KANSL3Q9P2N6 904 aa9.75□□□□□ -0.85
HMBOX1-216ENST00000561377 PTPRAP18433 802 aa9.74□□□□□ -0.85
HMBOX1-216ENST00000561377 CES1P23141 567 aa9.74□□□□□ -0.85
HMBOX1-216ENST00000561377 FOXD4L6Q3SYB3 417 aaPredicted RBP9.74□□□□□ -0.85
HMBOX1-216ENST00000561377 FOXD4L3Q6VB84 417 aaPredicted RBP9.74□□□□□ -0.85
HMBOX1-216ENST00000561377 CNTN3Q9P232 1028 aa9.74□□□□□ -0.85
HMBOX1-216ENST00000561377 ALX3O95076 343 aa9.73□□□□□ -0.85
HMBOX1-216ENST00000561377 DZIP1LQ8IYY4 767 aaKnown RBP9.73□□□□□ -0.85
HMBOX1-216ENST00000561377 PMEPA1Q969W9 287 aa9.73□□□□□ -0.85
HMBOX1-216ENST00000561377 GGNBP2Q9H3C7 697 aa9.73□□□□□ -0.85
HMBOX1-216ENST00000561377 SALL4Q9UJQ4 1053 aa9.73□□□□□ -0.85
HMBOX1-216ENST00000561377 FAM13AO94988 1023 aa9.72□□□□□ -0.85
HMBOX1-216ENST00000561377 AAMPQ13685 434 aa9.72□□□□□ -0.85
HMBOX1-216ENST00000561377 TXNDC11Q6PKC3 985 aa9.72□□□□□ -0.85
HMBOX1-216ENST00000561377 C1orf127Q8N9H9 656 aa9.72□□□□□ -0.85
HMBOX1-216ENST00000561377 GALNT11Q8NCW6 608 aa9.72□□□□□ -0.85
HMBOX1-216ENST00000561377 NPR3P17342 541 aa9.71□□□□□ -0.86
HMBOX1-216ENST00000561377 CD68P34810 354 aaPredicted RBP9.71□□□□□ -0.86
HMBOX1-216ENST00000561377 SF3B2Q13435 895 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms