RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-213ENST00000561342 TMEM106CQ9BVX2 250 aa15.41■□□□□ 0.06
IRF9-213ENST00000561342 ALDH1A1P00352 501 aa15.4■□□□□ 0.06
IRF9-213ENST00000561342 WDR43Q15061 677 aaKnown RBP eCLIP15.4■□□□□ 0.06
IRF9-213ENST00000561342 ANGEL2Q5VTE6 544 aaKnown RBP15.4■□□□□ 0.06
IRF9-213ENST00000561342 DDX46Q7L014 1031 aaKnown RBP15.4■□□□□ 0.06
IRF9-213ENST00000561342 RUNDC1Q96C34 613 aa15.4■□□□□ 0.06
IRF9-213ENST00000561342 DBNDD1Q9H9R9 158 aa15.4■□□□□ 0.06
IRF9-213ENST00000561342 UBE2Q2LH0YL09 131 aa15.39■□□□□ 0.05
IRF9-213ENST00000561342 OTOP1Q7RTM1 612 aa15.39■□□□□ 0.05
IRF9-213ENST00000561342 OTUD5Q96G74 571 aa15.39■□□□□ 0.05
IRF9-213ENST00000561342 MKRN3Q13064 507 aaKnown RBP15.38■□□□□ 0.05
IRF9-213ENST00000561342 TTLL12Q14166 644 aaPredicted RBP15.38■□□□□ 0.05
IRF9-213ENST00000561342 PROSER3Q2NL68 480 aa15.38■□□□□ 0.05
IRF9-213ENST00000561342 COPS6Q7L5N1 327 aa15.38■□□□□ 0.05
IRF9-213ENST00000561342 TMC4Q7Z404 712 aa15.38■□□□□ 0.05
IRF9-213ENST00000561342 XAGE3Q8WTP9 111 aa15.38■□□□□ 0.05
IRF9-213ENST00000561342 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
IRF9-213ENST00000561342 H0YGN5 161 aa15.37■□□□□ 0.05
IRF9-213ENST00000561342 DDX10Q13206 875 aaKnown RBP15.37■□□□□ 0.05
IRF9-213ENST00000561342 TCIRG1Q13488 830 aa15.37■□□□□ 0.05
IRF9-213ENST00000561342 GRAPQ13588 217 aa15.37■□□□□ 0.05
IRF9-213ENST00000561342 SCARF1Q14162 830 aa15.37■□□□□ 0.05
IRF9-213ENST00000561342 MOB2Q70IA6 237 aa15.37■□□□□ 0.05
IRF9-213ENST00000561342 NLRP10Q86W26 655 aa15.37■□□□□ 0.05
IRF9-213ENST00000561342 GRAPLQ8TC17 118 aaPredicted RBP15.37■□□□□ 0.05
IRF9-213ENST00000561342 ARMC5Q96C12 935 aa15.37■□□□□ 0.05
IRF9-213ENST00000561342 R3HDMLQ9H3Y0 253 aa15.37■□□□□ 0.05
IRF9-213ENST00000561342 PTPN22Q9Y2R2 807 aa15.37■□□□□ 0.05
IRF9-213ENST00000561342 SH3TC1Q8TE82 1336 aa15.37■□□□□ 0.05
IRF9-213ENST00000561342 RIMBP2O15034 1052 aa15.36■□□□□ 0.05
IRF9-213ENST00000561342 ECE2O60344 883 aa15.36■□□□□ 0.05
IRF9-213ENST00000561342 MNX1P50219 401 aaPredicted RBP15.36■□□□□ 0.05
IRF9-213ENST00000561342 CHRDL2Q6WN34 429 aa15.36■□□□□ 0.05
IRF9-213ENST00000561342 NSFL1CQ9UNZ2 370 aaKnown RBP15.36■□□□□ 0.05
IRF9-213ENST00000561342 TRIM35Q9UPQ4 493 aa15.36■□□□□ 0.05
IRF9-213ENST00000561342 C6orf229H3BNL8 230 aa15.35■□□□□ 0.05
IRF9-213ENST00000561342 ANXA1P04083 346 aa15.35■□□□□ 0.05
IRF9-213ENST00000561342 NF2P35240 595 aa15.35■□□□□ 0.05
IRF9-213ENST00000561342 AIMP1Q12904 312 aaKnown RBP15.35■□□□□ 0.05
IRF9-213ENST00000561342 NEUROD2Q15784 382 aa15.35■□□□□ 0.05
IRF9-213ENST00000561342 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
IRF9-213ENST00000561342 PLBD2Q8NHP8 589 aa15.35■□□□□ 0.05
IRF9-213ENST00000561342 ERO1AQ96HE7 468 aa15.35■□□□□ 0.05
IRF9-213ENST00000561342 EYA3Q99504 573 aa15.35■□□□□ 0.05
IRF9-213ENST00000561342 DBF4Q9UBU7 674 aaPredicted RBP15.35■□□□□ 0.05
IRF9-213ENST00000561342 TRMT112Q9UI30 125 aaKnown RBP15.35■□□□□ 0.05
IRF9-213ENST00000561342 PAPPA2Q9BXP8 1791 aa15.34■□□□□ 0.05
IRF9-213ENST00000561342 VIL1P09327 827 aaKnown RBP15.34■□□□□ 0.05
IRF9-213ENST00000561342 DIEXFQ68CQ4 756 aaKnown RBP15.34■□□□□ 0.05
IRF9-213ENST00000561342 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
IRF9-213ENST00000561342 KCNQ5Q9NR82 932 aa15.34■□□□□ 0.05
IRF9-213ENST00000561342 HYPKQ9NX55 129 aa15.34■□□□□ 0.05
IRF9-213ENST00000561342 PITPNM2Q9BZ72 1349 aa15.34■□□□□ 0.05
IRF9-213ENST00000561342 RTL9Q8NET4 1388 aa15.34■□□□□ 0.05
IRF9-213ENST00000561342 G3V3G9 751 aa15.33■□□□□ 0.04
IRF9-213ENST00000561342 INHBEP58166 350 aa15.33■□□□□ 0.04
IRF9-213ENST00000561342 CALD1Q05682 793 aaKnown RBP15.33■□□□□ 0.04
IRF9-213ENST00000561342 DOK7Q18PE1 504 aa15.33■□□□□ 0.04
IRF9-213ENST00000561342 DCAF8Q5TAQ9 597 aa15.33■□□□□ 0.04
IRF9-213ENST00000561342 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
IRF9-213ENST00000561342 CHMP4AQ9BY43 222 aa15.33■□□□□ 0.04
IRF9-213ENST00000561342 CHPF2Q9P2E5 772 aa15.33■□□□□ 0.04
IRF9-213ENST00000561342 RBM27Q9P2N5 1060 aaKnown RBP15.33■□□□□ 0.04
IRF9-213ENST00000561342 ADAMTS8Q9UP79 889 aa15.33■□□□□ 0.04
IRF9-213ENST00000561342 HCLS1P14317 486 aaPredicted RBP15.32■□□□□ 0.04
IRF9-213ENST00000561342 ZNF280AP59817 542 aaPredicted RBP15.32■□□□□ 0.04
IRF9-213ENST00000561342 TRIM28Q13263 835 aaKnown RBP15.32■□□□□ 0.04
IRF9-213ENST00000561342 SLC4A8Q2Y0W8 1093 aa15.32■□□□□ 0.04
IRF9-213ENST00000561342 ANKRD13DQ6ZTN6 518 aa15.32■□□□□ 0.04
IRF9-213ENST00000561342 NBPF11Q86T75 865 aa15.32■□□□□ 0.04
IRF9-213ENST00000561342 EFCC1Q9HA90 598 aa15.32■□□□□ 0.04
IRF9-213ENST00000561342 LAS1LQ9Y4W2 734 aaKnown RBP15.32■□□□□ 0.04
IRF9-213ENST00000561342 SZT2Q5T011 3432 aa15.32■□□□□ 0.04
IRF9-213ENST00000561342 HSP90B1P14625 803 aaKnown RBP15.31■□□□□ 0.04
IRF9-213ENST00000561342 ARMC9Q7Z3E5 817 aa15.31■□□□□ 0.04
IRF9-213ENST00000561342 AGBL3Q8NEM8 1001 aa15.31■□□□□ 0.04
IRF9-213ENST00000561342 ISCA1Q9BUE6 129 aa15.31■□□□□ 0.04
IRF9-213ENST00000561342 MANSC4A6NHS7 340 aaPredicted RBP15.3■□□□□ 0.04
IRF9-213ENST00000561342 SF3B3Q15393 1217 aaKnown RBP15.3■□□□□ 0.04
IRF9-213ENST00000561342 KRT24Q2M2I5 525 aa15.3■□□□□ 0.04
IRF9-213ENST00000561342 PRAMEF18Q5VWM3 479 aa15.3■□□□□ 0.04
IRF9-213ENST00000561342 DUSP27Q5VZP5 1158 aa15.3■□□□□ 0.04
IRF9-213ENST00000561342 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
IRF9-213ENST00000561342 ZNF333Q96JL9 665 aa15.3■□□□□ 0.04
IRF9-213ENST00000561342 ZC3H12CQ9C0D7 883 aaKnown RBP15.3■□□□□ 0.04
IRF9-213ENST00000561342 PRKRIP1Q9H875 184 aaPredicted RBP15.3■□□□□ 0.04
IRF9-213ENST00000561342 MYOZ2Q9NPC6 264 aa15.3■□□□□ 0.04
IRF9-213ENST00000561342 POLLQ9UGP5 575 aa15.3■□□□□ 0.04
IRF9-213ENST00000561342 ANKRD36CQ5JPF3 1778 aa15.29■□□□□ 0.04
IRF9-213ENST00000561342 USP17L8P0C7I0 530 aa15.29■□□□□ 0.04
IRF9-213ENST00000561342 SPRYD7Q5W111 196 aa15.29■□□□□ 0.04
IRF9-213ENST00000561342 CD99L2Q8TCZ2 262 aa15.29■□□□□ 0.04
IRF9-213ENST00000561342 IFT57Q9NWB7 429 aa15.29■□□□□ 0.04
IRF9-213ENST00000561342 ZNF853P0CG23 659 aa15.28■□□□□ 0.04
IRF9-213ENST00000561342 GNAI1P63096 354 aa15.28■□□□□ 0.04
IRF9-213ENST00000561342 PTPN12Q05209 780 aaKnown RBP15.28■□□□□ 0.04
IRF9-213ENST00000561342 SLC9C1Q4G0N8 1177 aa15.28■□□□□ 0.04
IRF9-213ENST00000561342 RSBN1LQ6PCB5 846 aaPredicted RBP15.28■□□□□ 0.04
IRF9-213ENST00000561342 DPF3Q92784 378 aa15.28■□□□□ 0.04
IRF9-213ENST00000561342 SCAF8Q9UPN6 1271 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms