RNA–Protein interactions for RNA: ENST00000561290.1

CRTC3-214, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-214ENST00000561290 PLA2G12BQ9BX93 195 aa18.46■□□□□ 0.55
CRTC3-214ENST00000561290 ZC3H12CQ9C0D7 883 aaKnown RBP18.46■□□□□ 0.55
CRTC3-214ENST00000561290 MYH16Q9H6N6 1097 aa18.46■□□□□ 0.55
CRTC3-214ENST00000561290 DBNDD1Q9H9R9 158 aa18.46■□□□□ 0.55
CRTC3-214ENST00000561290 GGA1Q9UJY5 639 aa18.46■□□□□ 0.55
CRTC3-214ENST00000561290 SCN9AQ15858 1988 aa18.46■□□□□ 0.55
CRTC3-214ENST00000561290 XDHP47989 1333 aa18.46■□□□□ 0.55
CRTC3-214ENST00000561290 THSD7BQ9C0I4 1608 aa18.45■□□□□ 0.54
CRTC3-214ENST00000561290 PSMD14O00487 310 aa18.45■□□□□ 0.54
CRTC3-214ENST00000561290 UFL1O94874 794 aa18.45■□□□□ 0.54
CRTC3-214ENST00000561290 EXOSC9Q06265 439 aaKnown RBP18.45■□□□□ 0.54
CRTC3-214ENST00000561290 FKBP5Q13451 457 aaPredicted RBP18.45■□□□□ 0.54
CRTC3-214ENST00000561290 LINS1Q8NG48 757 aa18.45■□□□□ 0.54
CRTC3-214ENST00000561290 DNAAF4Q8WXU2 420 aa18.45■□□□□ 0.54
CRTC3-214ENST00000561290 JARID2Q92833 1246 aaPredicted RBP18.45■□□□□ 0.54
CRTC3-214ENST00000561290 ANKIB1Q9P2G1 1089 aa18.45■□□□□ 0.54
CRTC3-214ENST00000561290 CNOT7Q9UIV1 285 aaKnown RBP18.45■□□□□ 0.54
CRTC3-214ENST00000561290 RIMBP2O15034 1052 aa18.44■□□□□ 0.54
CRTC3-214ENST00000561290 GCKRQ14397 625 aa18.44■□□□□ 0.54
CRTC3-214ENST00000561290 UBE3BQ7Z3V4 1068 aa18.44■□□□□ 0.54
CRTC3-214ENST00000561290 BSDC1Q9NW68 430 aaPredicted RBP18.44■□□□□ 0.54
CRTC3-214ENST00000561290 SALL2Q9Y467 1007 aaPredicted RBP18.44■□□□□ 0.54
CRTC3-214ENST00000561290 ZNF521Q96K83 1311 aa18.44■□□□□ 0.54
CRTC3-214ENST00000561290 SPEF2Q9C093 1822 aa18.44■□□□□ 0.54
CRTC3-214ENST00000561290 H7C1D1 291 aa18.43■□□□□ 0.54
CRTC3-214ENST00000561290 VEGFBP49765 207 aa18.43■□□□□ 0.54
CRTC3-214ENST00000561290 CASP7P55210 303 aa18.43■□□□□ 0.54
CRTC3-214ENST00000561290 MICALL2Q8IY33 904 aa18.43■□□□□ 0.54
CRTC3-214ENST00000561290 FAM9BQ8IZU0 186 aa18.43■□□□□ 0.54
CRTC3-214ENST00000561290 TRPM4Q8TD43 1214 aa18.43■□□□□ 0.54
CRTC3-214ENST00000561290 CCDC85AQ96PX6 553 aaPredicted RBP18.43■□□□□ 0.54
CRTC3-214ENST00000561290 GREM2Q9H772 168 aa18.43■□□□□ 0.54
CRTC3-214ENST00000561290 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
CRTC3-214ENST00000561290 VIL1P09327 827 aaKnown RBP18.42■□□□□ 0.54
CRTC3-214ENST00000561290 ATP2B4P23634 1241 aa18.42■□□□□ 0.54
CRTC3-214ENST00000561290 HIRAP54198 1017 aaPredicted RBP18.42■□□□□ 0.54
CRTC3-214ENST00000561290 DEFB115Q30KQ5 88 aa18.42■□□□□ 0.54
CRTC3-214ENST00000561290 GPR101Q96P66 508 aaPredicted RBP18.42■□□□□ 0.54
CRTC3-214ENST00000561290 MED23Q9ULK4 1368 aa18.42■□□□□ 0.54
CRTC3-214ENST00000561290 DOK7Q18PE1 504 aa18.41■□□□□ 0.54
CRTC3-214ENST00000561290 ABT1Q9ULW3 272 aaKnown RBP18.41■□□□□ 0.54
CRTC3-214ENST00000561290 ZBTB12Q9Y330 459 aaPredicted RBP18.41■□□□□ 0.54
CRTC3-214ENST00000561290 TRAF5O00463 557 aa18.4■□□□□ 0.54
CRTC3-214ENST00000561290 CSF1RP07333 972 aa18.4■□□□□ 0.54
CRTC3-214ENST00000561290 COL13A1Q5TAT6 717 aaPredicted RBP18.4■□□□□ 0.54
CRTC3-214ENST00000561290 CST9Q5W186 159 aa18.4■□□□□ 0.54
CRTC3-214ENST00000561290 CDC37L1Q7L3B6 337 aa18.4■□□□□ 0.54
CRTC3-214ENST00000561290 MINPP1Q9UNW1 487 aa18.4■□□□□ 0.54
CRTC3-214ENST00000561290 TLL2Q9Y6L7 1015 aa18.4■□□□□ 0.54
CRTC3-214ENST00000561290 SHTN1A0MZ66 631 aa18.39■□□□□ 0.53
CRTC3-214ENST00000561290 FMR1Q06787 632 aaKnown RBP eCLIP18.39■□□□□ 0.53
CRTC3-214ENST00000561290 PODNQ7Z5L7 613 aa18.39■□□□□ 0.53
CRTC3-214ENST00000561290 G3V3G9 751 aa18.38■□□□□ 0.53
CRTC3-214ENST00000561290 IGHMBP2P38935 993 aaKnown RBP18.38■□□□□ 0.53
CRTC3-214ENST00000561290 BEND3Q5T5X7 828 aa18.38■□□□□ 0.53
CRTC3-214ENST00000561290 DCAF8Q5TAQ9 597 aa18.38■□□□□ 0.53
CRTC3-214ENST00000561290 AGBL3Q8NEM8 1001 aa18.38■□□□□ 0.53
CRTC3-214ENST00000561290 GLIS2Q9BZE0 524 aaPredicted RBP18.38■□□□□ 0.53
CRTC3-214ENST00000561290 KCNQ5Q9NR82 932 aa18.38■□□□□ 0.53
CRTC3-214ENST00000561290 WDR33Q9C0J8 1336 aaKnown RBP18.38■□□□□ 0.53
CRTC3-214ENST00000561290 ZNF646O15015 1829 aaPredicted RBP18.37■□□□□ 0.53
CRTC3-214ENST00000561290 ITGA6P23229 1130 aa18.37■□□□□ 0.53
CRTC3-214ENST00000561290 ECE1P42892 770 aa18.37■□□□□ 0.53
CRTC3-214ENST00000561290 CCT4P50991 539 aaKnown RBP18.37■□□□□ 0.53
CRTC3-214ENST00000561290 FAM161AQ3B820 660 aa18.37■□□□□ 0.53
CRTC3-214ENST00000561290 HHIPL1Q96JK4 782 aa18.37■□□□□ 0.53
CRTC3-214ENST00000561290 WBP1LQ9NX94 342 aa18.37■□□□□ 0.53
CRTC3-214ENST00000561290 CELF2O95319 508 aaKnown RBP18.36■□□□□ 0.53
CRTC3-214ENST00000561290 RSBN1LQ6PCB5 846 aaPredicted RBP18.36■□□□□ 0.53
CRTC3-214ENST00000561290 SAMD7Q7Z3H4 446 aa18.36■□□□□ 0.53
CRTC3-214ENST00000561290 LEMD3Q9Y2U8 911 aa18.36■□□□□ 0.53
CRTC3-214ENST00000561290 A0A1B0GUL6 1792 aa18.35■□□□□ 0.53
CRTC3-214ENST00000561290 F6X3S4 739 aa18.35■□□□□ 0.53
CRTC3-214ENST00000561290 FOXN1O15353 648 aa18.35■□□□□ 0.53
CRTC3-214ENST00000561290 ZNF280AP59817 542 aaPredicted RBP18.35■□□□□ 0.53
CRTC3-214ENST00000561290 MAP2K1Q02750 393 aaPredicted RBP18.35■□□□□ 0.53
CRTC3-214ENST00000561290 KIF4BQ2VIQ3 1234 aa18.35■□□□□ 0.53
CRTC3-214ENST00000561290 TBC1D10BQ4KMP7 808 aaPredicted RBP18.35■□□□□ 0.53
CRTC3-214ENST00000561290 SAPCD2Q86UD0 394 aa18.35■□□□□ 0.53
CRTC3-214ENST00000561290 AIDAQ96BJ3 306 aa18.35■□□□□ 0.53
CRTC3-214ENST00000561290 GMLQ99445 158 aa18.35■□□□□ 0.53
CRTC3-214ENST00000561290 ANKRD2Q9GZV1 360 aa18.35■□□□□ 0.53
CRTC3-214ENST00000561290 USP17L3A6NCW0 530 aa18.34■□□□□ 0.53
CRTC3-214ENST00000561290 USP17L4A6NCW7 530 aa18.34■□□□□ 0.53
CRTC3-214ENST00000561290 EGFRP00533 1210 aa18.34■□□□□ 0.53
CRTC3-214ENST00000561290 USP17L1Q7RTZ2 530 aa18.34■□□□□ 0.53
CRTC3-214ENST00000561290 CAPNS2Q96L46 248 aa18.34■□□□□ 0.53
CRTC3-214ENST00000561290 MPHOSPH8Q99549 860 aa18.34■□□□□ 0.53
CRTC3-214ENST00000561290 PRDM10Q9NQV6 1147 aa18.34■□□□□ 0.53
CRTC3-214ENST00000561290 POLR2AP24928 1970 aaKnown RBP18.33■□□□□ 0.53
CRTC3-214ENST00000561290 GRM8O00222 908 aa18.33■□□□□ 0.52
CRTC3-214ENST00000561290 ALDH1L1O75891 902 aa18.33■□□□□ 0.52
CRTC3-214ENST00000561290 CTCFP49711 727 aaPredicted RBP18.33■□□□□ 0.52
CRTC3-214ENST00000561290 KRT26Q7Z3Y9 468 aa18.33■□□□□ 0.52
CRTC3-214ENST00000561290 TNS4Q8IZW8 715 aa18.33■□□□□ 0.52
CRTC3-214ENST00000561290 COA1Q9GZY4 146 aa18.33■□□□□ 0.52
CRTC3-214ENST00000561290 ZNF804BA4D1E1 1349 aa18.32■□□□□ 0.52
CRTC3-214ENST00000561290 MYO3BQ8WXR4 1341 aa18.32■□□□□ 0.52
CRTC3-214ENST00000561290 ANKRD18BA2A2Z9 1011 aa18.32■□□□□ 0.52
CRTC3-214ENST00000561290 E9PSI1 815 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms