RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 NLRP8Q86W28 1048 aa8.98□□□□□ -0.97
LRRC28-220ENST00000561253 ATCAYQ86WG3 371 aa8.98□□□□□ -0.97
LRRC28-220ENST00000561253 CCDC155Q8N6L0 562 aa8.98□□□□□ -0.97
LRRC28-220ENST00000561253 FAM13BQ9NYF5 915 aa8.98□□□□□ -0.97
LRRC28-220ENST00000561253 BRPF3Q9ULD4 1205 aa8.98□□□□□ -0.97
LRRC28-220ENST00000561253 BCORL1Q5H9F3 1711 aa8.97□□□□□ -0.97
LRRC28-220ENST00000561253 DUOX2Q9NRD8 1548 aa8.97□□□□□ -0.97
LRRC28-220ENST00000561253 H7C1W4 665 aa8.97□□□□□ -0.97
LRRC28-220ENST00000561253 LCE2BO14633 110 aa8.97□□□□□ -0.97
LRRC28-220ENST00000561253 BTLAQ7Z6A9 289 aa8.97□□□□□ -0.97
LRRC28-220ENST00000561253 ANKRD30AQ9BXX3 1397 aa8.97□□□□□ -0.97
LRRC28-220ENST00000561253 IDH3AP50213 366 aa8.96□□□□□ -0.98
LRRC28-220ENST00000561253 DNM1Q05193 864 aaKnown RBP8.96□□□□□ -0.98
LRRC28-220ENST00000561253 LBRQ14739 615 aaKnown RBP8.96□□□□□ -0.98
LRRC28-220ENST00000561253 CEP63Q96MT8 703 aa8.96□□□□□ -0.98
LRRC28-220ENST00000561253 NUCKS1Q9H1E3 243 aaKnown RBP8.96□□□□□ -0.98
LRRC28-220ENST00000561253 CCDC87Q9NVE4 849 aa8.96□□□□□ -0.98
LRRC28-220ENST00000561253 ADAMTSL3P82987 1691 aa8.96□□□□□ -0.98
LRRC28-220ENST00000561253 NAIPQ13075 1403 aa8.96□□□□□ -0.98
LRRC28-220ENST00000561253 ERBINQ96RT1 1412 aa8.96□□□□□ -0.98
LRRC28-220ENST00000561253 MROH1Q8NDA8 1641 aa8.95□□□□□ -0.98
LRRC28-220ENST00000561253 FZD6O60353 706 aa8.95□□□□□ -0.98
LRRC28-220ENST00000561253 ARSDP51689 593 aa8.95□□□□□ -0.98
LRRC28-220ENST00000561253 FIGNL1Q6PIW4 674 aa8.95□□□□□ -0.98
LRRC28-220ENST00000561253 EDEM1Q92611 657 aa8.95□□□□□ -0.98
LRRC28-220ENST00000561253 RRP7BPQ9NSQ0 103 aa8.95□□□□□ -0.98
LRRC28-220ENST00000561253 DMGDHQ9UI17 866 aaKnown RBP8.95□□□□□ -0.98
LRRC28-220ENST00000561253 HFM1A2PYH4 1435 aa8.95□□□□□ -0.98
LRRC28-220ENST00000561253 PCSK2P16519 638 aa8.94□□□□□ -0.98
LRRC28-220ENST00000561253 ITGA6P23229 1130 aa8.94□□□□□ -0.98
LRRC28-220ENST00000561253 MZF1P28698 734 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-220ENST00000561253 SAMD5Q5TGI4 173 aa8.94□□□□□ -0.98
LRRC28-220ENST00000561253 ZSCAN29Q8IWY8 852 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-220ENST00000561253 TMC1Q8TDI8 760 aa8.94□□□□□ -0.98
LRRC28-220ENST00000561253 GPR152Q8TDT2 470 aa8.94□□□□□ -0.98
LRRC28-220ENST00000561253 PIK3R5Q8WYR1 880 aa8.94□□□□□ -0.98
LRRC28-220ENST00000561253 ANKRD50Q9ULJ7 1429 aa8.94□□□□□ -0.98
LRRC28-220ENST00000561253 RNF17Q9BXT8 1623 aaKnown RBP8.94□□□□□ -0.98
LRRC28-220ENST00000561253 EPB42P16452 691 aa8.93□□□□□ -0.98
LRRC28-220ENST00000561253 TYRO3Q06418 890 aa8.93□□□□□ -0.98
LRRC28-220ENST00000561253 TRIM22Q8IYM9 498 aa8.93□□□□□ -0.98
LRRC28-220ENST00000561253 RGL4Q8IZJ4 473 aa8.93□□□□□ -0.98
LRRC28-220ENST00000561253 TTC16Q8NEE8 873 aa8.93□□□□□ -0.98
LRRC28-220ENST00000561253 GMCL1Q96IK5 515 aa8.93□□□□□ -0.98
LRRC28-220ENST00000561253 CITED4Q96RK1 184 aa8.93□□□□□ -0.98
LRRC28-220ENST00000561253 ZCCHC2Q9C0B9 1178 aaKnown RBP8.93□□□□□ -0.98
LRRC28-220ENST00000561253 POLIQ9UNA4 740 aa8.93□□□□□ -0.98
LRRC28-220ENST00000561253 VWDEQ8N2E2 1590 aa8.93□□□□□ -0.98
LRRC28-220ENST00000561253 EIF2AK4Q9P2K8 1649 aaKnown RBP8.93□□□□□ -0.98
LRRC28-220ENST00000561253 DEPDC5O75140 1603 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 KDM5DQ9BY66 1539 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 POTECB2RU33 542 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 OPLAHO14841 1288 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 ATXN7O15265 892 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-220ENST00000561253 PDGFAP04085 211 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 ERCC3P19447 782 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 INPP5BP32019 993 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 USP5P45974 858 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 DBN1Q16643 649 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 RBCK1Q9BYM8 510 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 BRD7Q9NPI1 651 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 CUEDC1Q9NWM3 386 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-220ENST00000561253 PCDHGC4Q9Y5F7 938 aa8.92□□□□□ -0.98
LRRC28-220ENST00000561253 PRDM15P57071 1507 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-220ENST00000561253 ANKRD33BA6NCL7 494 aa8.91□□□□□ -0.98
LRRC28-220ENST00000561253 KIF3BO15066 747 aa8.91□□□□□ -0.98
LRRC28-220ENST00000561253 RPLP1P05386 114 aaKnown RBP8.91□□□□□ -0.98
LRRC28-220ENST00000561253 ITGAEP38570 1179 aa8.91□□□□□ -0.98
LRRC28-220ENST00000561253 PDE3BQ13370 1112 aa8.91□□□□□ -0.98
LRRC28-220ENST00000561253 DNAJC14Q6Y2X3 702 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-220ENST00000561253 CMTR1Q8N1G2 835 aaKnown RBP8.91□□□□□ -0.98
LRRC28-220ENST00000561253 RGS22Q8NE09 1264 aa8.91□□□□□ -0.98
LRRC28-220ENST00000561253 NUDT16Q96DE0 195 aaKnown RBP8.91□□□□□ -0.98
LRRC28-220ENST00000561253 ASB16Q96NS5 453 aa8.91□□□□□ -0.98
LRRC28-220ENST00000561253 MADDQ8WXG6 1647 aa8.91□□□□□ -0.98
LRRC28-220ENST00000561253 FAM135AQ9P2D6 1515 aa8.9□□□□□ -0.98
LRRC28-220ENST00000561253 ARID4BQ4LE39 1312 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-220ENST00000561253 KHNYNO15037 678 aaKnown RBP8.9□□□□□ -0.98
LRRC28-220ENST00000561253 PPFIA3O75145 1194 aa8.9□□□□□ -0.98
LRRC28-220ENST00000561253 THBS1P07996 1170 aa8.9□□□□□ -0.98
LRRC28-220ENST00000561253 FAM157BP0CG42 384 aa8.9□□□□□ -0.98
LRRC28-220ENST00000561253 ZNF837Q96EG3 531 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-220ENST00000561253 USP20Q9Y2K6 914 aa8.9□□□□□ -0.98
LRRC28-220ENST00000561253 RTCBQ9Y3I0 505 aaKnown RBP8.9□□□□□ -0.98
LRRC28-220ENST00000561253 DCDC2BA2VCK2 349 aa8.89□□□□□ -0.99
LRRC28-220ENST00000561253 CDC14CA4D256 554 aa8.89□□□□□ -0.99
LRRC28-220ENST00000561253 C8orf34Q49A92 452 aa8.89□□□□□ -0.99
LRRC28-220ENST00000561253 TMC7Q7Z402 723 aa8.89□□□□□ -0.99
LRRC28-220ENST00000561253 FNDC3AQ9Y2H6 1198 aaKnown RBP8.89□□□□□ -0.99
LRRC28-220ENST00000561253 ABCC3O15438 1527 aa8.89□□□□□ -0.99
LRRC28-220ENST00000561253 LMTK2Q8IWU2 1503 aa8.89□□□□□ -0.99
LRRC28-220ENST00000561253 PTPRMP28827 1452 aa8.89□□□□□ -0.99
LRRC28-220ENST00000561253 GCC2Q8IWJ2 1684 aa8.88□□□□□ -0.99
LRRC28-220ENST00000561253 UNC13BO14795 1591 aa8.88□□□□□ -0.99
LRRC28-220ENST00000561253 EHHADHQ08426 723 aa8.88□□□□□ -0.99
LRRC28-220ENST00000561253 MLECQ14165 292 aa8.88□□□□□ -0.99
LRRC28-220ENST00000561253 FOXR1Q6PIV2 292 aa8.88□□□□□ -0.99
LRRC28-220ENST00000561253 GJD3Q8N144 294 aa8.88□□□□□ -0.99
LRRC28-220ENST00000561253 GTPBP3Q969Y2 492 aaKnown RBP8.88□□□□□ -0.99
LRRC28-220ENST00000561253 DMRTB1Q96MA1 342 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms