RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 USP17L1Q7RTZ2 530 aa8.34□□□□□ -1.07
USP8-216ENST00000561206 PPME1Q9Y570 386 aa8.34□□□□□ -1.07
USP8-216ENST00000561206 J3QW42 95 aa8.33□□□□□ -1.08
USP8-216ENST00000561206 CD68P34810 354 aaPredicted RBP8.33□□□□□ -1.08
USP8-216ENST00000561206 MSMPQ1L6U9 139 aa8.33□□□□□ -1.08
USP8-216ENST00000561206 FBLN7Q53RD9 439 aa8.33□□□□□ -1.08
USP8-216ENST00000561206 GHRHP01286 108 aa8.32□□□□□ -1.08
USP8-216ENST00000561206 HOXA10P31260 410 aaPredicted RBP8.32□□□□□ -1.08
USP8-216ENST00000561206 NFXL1Q6ZNB6 911 aa8.32□□□□□ -1.08
USP8-216ENST00000561206 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.32□□□□□ -1.08
USP8-216ENST00000561206 ACAD11Q709F0 780 aa8.32□□□□□ -1.08
USP8-216ENST00000561206 PIM2Q9P1W9 311 aa8.32□□□□□ -1.08
USP8-216ENST00000561206 TRIM33Q9UPN9 1127 aa8.32□□□□□ -1.08
USP8-216ENST00000561206 RBSNQ9H1K0 784 aa8.31□□□□□ -1.08
USP8-216ENST00000561206 KCNK4Q9NYG8 393 aa8.31□□□□□ -1.08
USP8-216ENST00000561206 PSAPP07602 524 aa8.3□□□□□ -1.08
USP8-216ENST00000561206 SPOCD1Q6ZMY3 1216 aa8.3□□□□□ -1.08
USP8-216ENST00000561206 KLK14Q9P0G3 267 aa8.3□□□□□ -1.08
USP8-216ENST00000561206 CCDC39Q9UFE4 941 aa8.3□□□□□ -1.08
USP8-216ENST00000561206 OPLAHO14841 1288 aa8.29□□□□□ -1.08
USP8-216ENST00000561206 MICAL2O94851 1124 aa8.29□□□□□ -1.08
USP8-216ENST00000561206 CPSF6Q16630 551 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP8-216ENST00000561206 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
USP8-216ENST00000561206 FBXL18Q96ME1 805 aa8.29□□□□□ -1.08
USP8-216ENST00000561206 ANGEL1Q9UNK9 670 aaKnown RBP8.29□□□□□ -1.08
USP8-216ENST00000561206 HIF3AQ9Y2N7 669 aa8.29□□□□□ -1.08
USP8-216ENST00000561206 MMP20O60882 483 aa8.28□□□□□ -1.08
USP8-216ENST00000561206 IGFBP4P22692 258 aa8.28□□□□□ -1.08
USP8-216ENST00000561206 BEND4Q6ZU67 534 aa8.28□□□□□ -1.08
USP8-216ENST00000561206 MKRN1Q9UHC7 482 aaKnown RBP8.28□□□□□ -1.08
USP8-216ENST00000561206 RTCBQ9Y3I0 505 aaKnown RBP8.28□□□□□ -1.08
USP8-216ENST00000561206 WDR64B1ANS9 1081 aa8.27□□□□□ -1.09
USP8-216ENST00000561206 COL19A1Q14993 1142 aa8.27□□□□□ -1.09
USP8-216ENST00000561206 KLHL23Q8NBE8 558 aa8.27□□□□□ -1.09
USP8-216ENST00000561206 RBM19Q9Y4C8 960 aaKnown RBP8.27□□□□□ -1.09
USP8-216ENST00000561206 KRTAP9-7A8MTY7 169 aa8.26□□□□□ -1.09
USP8-216ENST00000561206 LINC01387J3KSC0 135 aa8.26□□□□□ -1.09
USP8-216ENST00000561206 XYLBO75191 536 aa8.26□□□□□ -1.09
USP8-216ENST00000561206 FOSL1P15407 271 aa8.26□□□□□ -1.09
USP8-216ENST00000561206 DGKZQ13574 1117 aa8.26□□□□□ -1.09
USP8-216ENST00000561206 VSIG10LQ86VR7 867 aa8.26□□□□□ -1.09
USP8-216ENST00000561206 MYO19Q96H55 970 aa8.26□□□□□ -1.09
USP8-216ENST00000561206 ZNF594Q96JF6 807 aaPredicted RBP8.26□□□□□ -1.09
USP8-216ENST00000561206 NSUN5Q96P11 429 aaKnown RBP8.26□□□□□ -1.09
USP8-216ENST00000561206 DBX1A6NMT0 343 aa8.25□□□□□ -1.09
USP8-216ENST00000561206 ATP9BO43861 1147 aa8.25□□□□□ -1.09
USP8-216ENST00000561206 BMP3P12645 472 aa8.25□□□□□ -1.09
USP8-216ENST00000561206 SEC13P55735 322 aa8.25□□□□□ -1.09
USP8-216ENST00000561206 ANKRD34AQ69YU3 496 aa8.25□□□□□ -1.09
USP8-216ENST00000561206 CCER1Q8TC90 406 aaPredicted RBP8.25□□□□□ -1.09
USP8-216ENST00000561206 COG6Q9Y2V7 657 aa8.25□□□□□ -1.09
USP8-216ENST00000561206 MCM6Q14566 821 aa8.24□□□□□ -1.09
USP8-216ENST00000561206 DUOXA2Q1HG44 320 aa8.24□□□□□ -1.09
USP8-216ENST00000561206 LCE5AQ5TCM9 118 aa8.24□□□□□ -1.09
USP8-216ENST00000561206 FOXD4L4Q8WXT5 416 aaPredicted RBP8.24□□□□□ -1.09
USP8-216ENST00000561206 UCN2Q96RP3 112 aa8.24□□□□□ -1.09
USP8-216ENST00000561206 QTRT2Q9H974 415 aaKnown RBP8.24□□□□□ -1.09
USP8-216ENST00000561206 RASA1P20936 1047 aa8.23□□□□□ -1.09
USP8-216ENST00000561206 PREPP48147 710 aa8.23□□□□□ -1.09
USP8-216ENST00000561206 C11orf91Q3C1V1 193 aa8.23□□□□□ -1.09
USP8-216ENST00000561206 KRTAP5-3Q6L8H2 238 aa8.23□□□□□ -1.09
USP8-216ENST00000561206 KCNMB2Q9Y691 235 aa8.23□□□□□ -1.09
USP8-216ENST00000561206 FSCN2O14926 492 aa8.22□□□□□ -1.09
USP8-216ENST00000561206 GIMAP7Q8NHV1 300 aa8.22□□□□□ -1.09
USP8-216ENST00000561206 ADAMTS19Q8TE59 1207 aa8.22□□□□□ -1.09
USP8-216ENST00000561206 LEMD3Q9Y2U8 911 aa8.22□□□□□ -1.09
USP8-216ENST00000561206 ADAM11O75078 769 aa8.21□□□□□ -1.1
USP8-216ENST00000561206 CDC27P30260 824 aa8.21□□□□□ -1.1
USP8-216ENST00000561206 COL26A1Q96A83 441 aa8.21□□□□□ -1.1
USP8-216ENST00000561206 MFSD14AQ96MC6 490 aa8.21□□□□□ -1.1
USP8-216ENST00000561206 KCNF1Q9H3M0 494 aa8.21□□□□□ -1.1
USP8-216ENST00000561206 F13BP05160 661 aa8.2□□□□□ -1.1
USP8-216ENST00000561206 UBASH3BQ8TF42 649 aa8.2□□□□□ -1.1
USP8-216ENST00000561206 ATG3Q9NT62 314 aa8.2□□□□□ -1.1
USP8-216ENST00000561206 USP20Q9Y2K6 914 aa8.2□□□□□ -1.1
USP8-216ENST00000561206 SART1O43290 800 aaKnown RBP8.19□□□□□ -1.1
USP8-216ENST00000561206 PAPLNO95428 1278 aa8.19□□□□□ -1.1
USP8-216ENST00000561206 TXNDC11Q6PKC3 985 aa8.19□□□□□ -1.1
USP8-216ENST00000561206 RNF208Q9H0X6 261 aa8.19□□□□□ -1.1
USP8-216ENST00000561206 TP53INP2Q8IXH6 220 aa8.18□□□□□ -1.1
USP8-216ENST00000561206 AGBL5Q8NDL9 886 aa8.18□□□□□ -1.1
USP8-216ENST00000561206 OR13H1Q8NG92 308 aa8.18□□□□□ -1.1
USP8-216ENST00000561206 CARD10Q9BWT7 1032 aa8.18□□□□□ -1.1
USP8-216ENST00000561206 BSDC1Q9NW68 430 aaPredicted RBP8.18□□□□□ -1.1
USP8-216ENST00000561206 ZNF648Q5T619 568 aaPredicted RBP8.17□□□□□ -1.1
USP8-216ENST00000561206 FAM117BQ6P1L5 589 aa8.17□□□□□ -1.1
USP8-216ENST00000561206 ADAMTSL4Q6UY14 1074 aa8.17□□□□□ -1.1
USP8-216ENST00000561206 NLRP13Q86W25 1043 aa8.17□□□□□ -1.1
USP8-216ENST00000561206 WNT8BQ93098 351 aa8.17□□□□□ -1.1
USP8-216ENST00000561206 DDX3YO15523 660 aaKnown RBP8.16□□□□□ -1.1
USP8-216ENST00000561206 FOXO3O43524 673 aa8.16□□□□□ -1.1
USP8-216ENST00000561206 SMNDC1O75940 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP8-216ENST00000561206 MAP4P27816 1152 aaKnown RBP8.16□□□□□ -1.1
USP8-216ENST00000561206 KRTAP19-4Q3LI73 84 aa8.16□□□□□ -1.1
USP8-216ENST00000561206 WWC1Q8IX03 1113 aa8.16□□□□□ -1.1
USP8-216ENST00000561206 RGL4Q8IZJ4 473 aa8.16□□□□□ -1.1
USP8-216ENST00000561206 CMTR1Q8N1G2 835 aaKnown RBP8.16□□□□□ -1.1
USP8-216ENST00000561206 KLHDC7BQ96G42 594 aa8.16□□□□□ -1.1
USP8-216ENST00000561206 METTL22Q9BUU2 404 aaPredicted RBP8.16□□□□□ -1.1
USP8-216ENST00000561206 OSBPL1AQ9BXW6 950 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms