RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 RTL9Q8NET4 1388 aa34.8■■■■□ 3.16
SNRPA1-215ENST00000561187 H7C1D1 291 aa34.8■■■■□ 3.16
SNRPA1-215ENST00000561187 CTCFP49711 727 aaPredicted RBP34.8■■■■□ 3.16
SNRPA1-215ENST00000561187 SAMD7Q7Z3H4 446 aa34.8■■■■□ 3.16
SNRPA1-215ENST00000561187 STK31Q9BXU1 1019 aa34.8■■■■□ 3.16
SNRPA1-215ENST00000561187 MRS2Q9HD23 443 aa34.8■■■■□ 3.16
SNRPA1-215ENST00000561187 HSP90B1P14625 803 aaKnown RBP34.79■■■■□ 3.16
SNRPA1-215ENST00000561187 TBC1D10BQ4KMP7 808 aaPredicted RBP34.79■■■■□ 3.16
SNRPA1-215ENST00000561187 IGKV5-2P06315 115 aa34.78■■■■□ 3.16
SNRPA1-215ENST00000561187 LBX1P52954 281 aa34.78■■■■□ 3.16
SNRPA1-215ENST00000561187 TWISTNBQ3B726 338 aaPredicted RBP34.78■■■■□ 3.16
SNRPA1-215ENST00000561187 DLK2Q6UY11 383 aa34.78■■■■□ 3.16
SNRPA1-215ENST00000561187 G2E3Q7L622 706 aa34.78■■■■□ 3.16
SNRPA1-215ENST00000561187 TLL2Q9Y6L7 1015 aa34.78■■■■□ 3.16
SNRPA1-215ENST00000561187 SCN9AQ15858 1988 aa34.78■■■■□ 3.16
SNRPA1-215ENST00000561187 EGFRP00533 1210 aa34.77■■■■□ 3.16
SNRPA1-215ENST00000561187 CWF19L2Q2TBE0 894 aaKnown RBP34.77■■■■□ 3.16
SNRPA1-215ENST00000561187 RBM26Q5T8P6 1007 aaKnown RBP34.77■■■■□ 3.16
SNRPA1-215ENST00000561187 KSR2Q6VAB6 950 aa34.77■■■■□ 3.16
SNRPA1-215ENST00000561187 GGA1Q9UJY5 639 aa34.77■■■■□ 3.16
SNRPA1-215ENST00000561187 ZC3H12CQ9C0D7 883 aaKnown RBP34.76■■■■□ 3.16
SNRPA1-215ENST00000561187 SPEF2Q9C093 1822 aa34.76■■■■□ 3.15
SNRPA1-215ENST00000561187 G3V3G9 751 aa34.75■■■■□ 3.15
SNRPA1-215ENST00000561187 CCDC27Q2M243 656 aa34.75■■■■□ 3.15
SNRPA1-215ENST00000561187 DCAF8Q5TAQ9 597 aa34.75■■■■□ 3.15
SNRPA1-215ENST00000561187 CHMP4AQ9BY43 222 aa34.75■■■■□ 3.15
SNRPA1-215ENST00000561187 THSD7BQ9C0I4 1608 aa34.74■■■■□ 3.15
SNRPA1-215ENST00000561187 ECE1P42892 770 aa34.74■■■■□ 3.15
SNRPA1-215ENST00000561187 CTSWP56202 376 aa34.74■■■■□ 3.15
SNRPA1-215ENST00000561187 ANKRD18AQ8IVF6 992 aa34.74■■■■□ 3.15
SNRPA1-215ENST00000561187 PODXL2Q9NZ53 605 aa34.74■■■■□ 3.15
SNRPA1-215ENST00000561187 PGAP2Q9UHJ9 254 aa34.74■■■■□ 3.15
SNRPA1-215ENST00000561187 AOC2O75106 756 aa34.73■■■■□ 3.15
SNRPA1-215ENST00000561187 MAP2K1Q02750 393 aaPredicted RBP34.73■■■■□ 3.15
SNRPA1-215ENST00000561187 NEXNQ0ZGT2 675 aa34.73■■■■□ 3.15
SNRPA1-215ENST00000561187 USP48Q86UV5 1035 aa34.73■■■■□ 3.15
SNRPA1-215ENST00000561187 HSPA8P11142 646 aaKnown RBP34.72■■■■□ 3.15
SNRPA1-215ENST00000561187 CDC37L1Q7L3B6 337 aa34.72■■■■□ 3.15
SNRPA1-215ENST00000561187 ZC3H15Q8WU90 426 aaKnown RBP34.72■■■■□ 3.15
SNRPA1-215ENST00000561187 DPF2Q92785 391 aa34.72■■■■□ 3.15
SNRPA1-215ENST00000561187 PRDM10Q9NQV6 1147 aa34.72■■■■□ 3.15
SNRPA1-215ENST00000561187 SLC4A2P04920 1241 aa34.71■■■■□ 3.15
SNRPA1-215ENST00000561187 SAPCD2Q86UD0 394 aa34.71■■■■□ 3.15
SNRPA1-215ENST00000561187 MYH3P11055 1940 aa34.7■■■■□ 3.15
SNRPA1-215ENST00000561187 FANCIQ9NVI1 1328 aa34.7■■■■□ 3.15
SNRPA1-215ENST00000561187 NEURL1BA8MQ27 555 aa34.69■■■■□ 3.14
SNRPA1-215ENST00000561187 ANP32CO43423 234 aa34.69■■■■□ 3.14
SNRPA1-215ENST00000561187 GREM2Q9H772 168 aa34.69■■■■□ 3.14
SNRPA1-215ENST00000561187 RPS12P25398 132 aaKnown RBP34.68■■■■□ 3.14
SNRPA1-215ENST00000561187 XDHP47989 1333 aa34.68■■■■□ 3.14
SNRPA1-215ENST00000561187 UBE3BQ7Z3V4 1068 aa34.68■■■■□ 3.14
SNRPA1-215ENST00000561187 WTIPA6NIX2 430 aaPredicted RBP34.67■■■■□ 3.14
SNRPA1-215ENST00000561187 ADM5C9JUS6 153 aa34.67■■■■□ 3.14
SNRPA1-215ENST00000561187 KIF4BQ2VIQ3 1234 aa34.67■■■■□ 3.14
SNRPA1-215ENST00000561187 CDC5LQ99459 802 aaKnown RBP34.67■■■■□ 3.14
SNRPA1-215ENST00000561187 TSKSQ9UJT2 592 aa34.67■■■■□ 3.14
SNRPA1-215ENST00000561187 KRT26Q7Z3Y9 468 aa34.66■■■■□ 3.14
SNRPA1-215ENST00000561187 TTLL11Q8NHH1 800 aa34.66■■■■□ 3.14
SNRPA1-215ENST00000561187 ASTN2O75129 1339 aaPredicted RBP34.65■■■■□ 3.14
SNRPA1-215ENST00000561187 IL16Q14005 1332 aa34.65■■■■□ 3.14
SNRPA1-215ENST00000561187 FLIIQ13045 1269 aa34.65■■■■□ 3.14
SNRPA1-215ENST00000561187 BEGAINQ9BUH8 593 aa34.65■■■■□ 3.14
SNRPA1-215ENST00000561187 POLR2AP24928 1970 aaKnown RBP34.65■■■■□ 3.14
SNRPA1-215ENST00000561187 FKBP5Q13451 457 aaPredicted RBP34.64■■■■□ 3.14
SNRPA1-215ENST00000561187 VIL1P09327 827 aaKnown RBP34.63■■■■□ 3.13
SNRPA1-215ENST00000561187 GGA3Q9NZ52 723 aa34.63■■■■□ 3.13
SNRPA1-215ENST00000561187 ZNF316A6NFI3 1004 aaPredicted RBP34.62■■■■□ 3.13
SNRPA1-215ENST00000561187 ATP2B4P23634 1241 aa34.62■■■■□ 3.13
SNRPA1-215ENST00000561187 DCPSQ96C86 337 aaKnown RBP34.62■■■■□ 3.13
SNRPA1-215ENST00000561187 ZEB1P37275 1124 aaPredicted RBP34.61■■■■□ 3.13
SNRPA1-215ENST00000561187 HUNKP57058 714 aa34.6■■■■□ 3.13
SNRPA1-215ENST00000561187 RSBN1LQ6PCB5 846 aaPredicted RBP34.6■■■■□ 3.13
SNRPA1-215ENST00000561187 MINPP1Q9UNW1 487 aa34.6■■■■□ 3.13
SNRPA1-215ENST00000561187 EXOSC9Q06265 439 aaKnown RBP34.59■■■■□ 3.13
SNRPA1-215ENST00000561187 FAM161AQ3B820 660 aa34.59■■■■□ 3.13
SNRPA1-215ENST00000561187 FBXW7Q969H0 707 aa34.59■■■■□ 3.13
SNRPA1-215ENST00000561187 PSME4Q14997 1843 aa34.59■■■■□ 3.13
SNRPA1-215ENST00000561187 H7C1W4 665 aa34.58■■■■□ 3.13
SNRPA1-215ENST00000561187 GCKRQ14397 625 aa34.58■■■■□ 3.13
SNRPA1-215ENST00000561187 DNAAF4Q8WXU2 420 aa34.58■■■■□ 3.13
SNRPA1-215ENST00000561187 BSDC1Q9NW68 430 aaPredicted RBP34.58■■■■□ 3.13
SNRPA1-215ENST00000561187 MED23Q9ULK4 1368 aa34.55■■■■□ 3.12
SNRPA1-215ENST00000561187 VAMP4O75379 141 aa34.55■■■■□ 3.12
SNRPA1-215ENST00000561187 MAP2K2P36507 400 aa34.55■■■■□ 3.12
SNRPA1-215ENST00000561187 IGHMBP2P38935 993 aaKnown RBP34.55■■■■□ 3.12
SNRPA1-215ENST00000561187 FAM9BQ8IZU0 186 aa34.55■■■■□ 3.12
SNRPA1-215ENST00000561187 ZIC5Q96T25 663 aa34.55■■■■□ 3.12
SNRPA1-215ENST00000561187 MXD3Q9BW11 206 aa34.55■■■■□ 3.12
SNRPA1-215ENST00000561187 GBA2Q9HCG7 927 aaPredicted RBP34.55■■■■□ 3.12
SNRPA1-215ENST00000561187 SPINK5Q9NQ38 1064 aaPredicted RBP34.55■■■■□ 3.12
SNRPA1-215ENST00000561187 USP17L3A6NCW0 530 aa34.54■■■■□ 3.12
SNRPA1-215ENST00000561187 USP17L4A6NCW7 530 aa34.54■■■■□ 3.12
SNRPA1-215ENST00000561187 ITGA6P23229 1130 aa34.54■■■■□ 3.12
SNRPA1-215ENST00000561187 CCT4P50991 539 aaKnown RBP34.54■■■■□ 3.12
SNRPA1-215ENST00000561187 USP17L1Q7RTZ2 530 aa34.54■■■■□ 3.12
SNRPA1-215ENST00000561187 SULF1Q8IWU6 871 aa34.54■■■■□ 3.12
SNRPA1-215ENST00000561187 AGBL3Q8NEM8 1001 aa34.54■■■■□ 3.12
SNRPA1-215ENST00000561187 HHIPL1Q96JK4 782 aa34.54■■■■□ 3.12
SNRPA1-215ENST00000561187 MYH16Q9H6N6 1097 aa34.54■■■■□ 3.12
SNRPA1-215ENST00000561187 SCAF8Q9UPN6 1271 aaKnown RBP34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms