RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 HOXB7P09629 217 aa24.3■■□□□ 1.48
TRIP4-211ENST00000560920 RPS8P62241 208 aaKnown RBP24.3■■□□□ 1.48
TRIP4-211ENST00000560920 TRIM28Q13263 835 aaKnown RBP24.3■■□□□ 1.48
TRIP4-211ENST00000560920 C2orf69Q8N8R5 385 aa24.3■■□□□ 1.48
TRIP4-211ENST00000560920 DCPSQ96C86 337 aaKnown RBP24.3■■□□□ 1.48
TRIP4-211ENST00000560920 IRS4O14654 1257 aaPredicted RBP24.29■■□□□ 1.48
TRIP4-211ENST00000560920 KIF23Q02241 960 aaPredicted RBP24.29■■□□□ 1.48
TRIP4-211ENST00000560920 EYA3Q99504 573 aa24.29■■□□□ 1.48
TRIP4-211ENST00000560920 VIL1P09327 827 aaKnown RBP24.28■■□□□ 1.48
TRIP4-211ENST00000560920 CCDC102AQ96A19 550 aa24.28■■□□□ 1.48
TRIP4-211ENST00000560920 HYPKQ9NX55 129 aa24.28■■□□□ 1.48
TRIP4-211ENST00000560920 RUNDC1Q96C34 613 aa24.27■■□□□ 1.48
TRIP4-211ENST00000560920 ASTN2O75129 1339 aaPredicted RBP24.27■■□□□ 1.48
TRIP4-211ENST00000560920 SCN9AQ15858 1988 aa24.26■■□□□ 1.47
TRIP4-211ENST00000560920 ZNF157P51786 506 aaPredicted RBP24.26■■□□□ 1.47
TRIP4-211ENST00000560920 KIF4BQ2VIQ3 1234 aa24.26■■□□□ 1.47
TRIP4-211ENST00000560920 ZC3H12CQ9C0D7 883 aaKnown RBP24.26■■□□□ 1.47
TRIP4-211ENST00000560920 SEC31BQ9NQW1 1179 aa24.26■■□□□ 1.47
TRIP4-211ENST00000560920 SAGE1Q9NXZ1 904 aa24.26■■□□□ 1.47
TRIP4-211ENST00000560920 PODXL2Q9NZ53 605 aa24.26■■□□□ 1.47
TRIP4-211ENST00000560920 DUSP27Q5VZP5 1158 aa24.25■■□□□ 1.47
TRIP4-211ENST00000560920 RNF186Q9NXI6 227 aa24.25■■□□□ 1.47
TRIP4-211ENST00000560920 GGA3Q9NZ52 723 aa24.24■■□□□ 1.47
TRIP4-211ENST00000560920 TRPA1O75762 1119 aa24.23■■□□□ 1.47
TRIP4-211ENST00000560920 SULF1Q8IWU6 871 aa24.23■■□□□ 1.47
TRIP4-211ENST00000560920 ZBTB38Q8NAP3 1195 aaPredicted RBP24.23■■□□□ 1.47
TRIP4-211ENST00000560920 SLC10A3P09131 477 aa24.22■■□□□ 1.47
TRIP4-211ENST00000560920 CDCA5Q96FF9 252 aa24.22■■□□□ 1.47
TRIP4-211ENST00000560920 CSRNP1Q96S65 589 aa24.22■■□□□ 1.47
TRIP4-211ENST00000560920 UFL1O94874 794 aa24.21■■□□□ 1.47
TRIP4-211ENST00000560920 ZNF280AP59817 542 aaPredicted RBP24.21■■□□□ 1.47
TRIP4-211ENST00000560920 RIC3Q7Z5B4 369 aa24.21■■□□□ 1.47
TRIP4-211ENST00000560920 MBIPQ9NS73 344 aa24.21■■□□□ 1.47
TRIP4-211ENST00000560920 ANKIB1Q9P2G1 1089 aa24.21■■□□□ 1.47
TRIP4-211ENST00000560920 MYBBP1AQ9BQG0 1328 aaKnown RBP24.2■■□□□ 1.46
TRIP4-211ENST00000560920 PHAXQ9H814 394 aaKnown RBP24.2■■□□□ 1.46
TRIP4-211ENST00000560920 GGA1Q9UJY5 639 aa24.2■■□□□ 1.46
TRIP4-211ENST00000560920 ADAMTS8Q9UP79 889 aa24.2■■□□□ 1.46
TRIP4-211ENST00000560920 TNRC18O15417 2968 aaPredicted RBP24.2■■□□□ 1.46
TRIP4-211ENST00000560920 G3V3G9 751 aa24.19■■□□□ 1.46
TRIP4-211ENST00000560920 SCARF1Q14162 830 aa24.19■■□□□ 1.46
TRIP4-211ENST00000560920 DCAF8Q5TAQ9 597 aa24.19■■□□□ 1.46
TRIP4-211ENST00000560920 RSBN1LQ6PCB5 846 aaPredicted RBP24.19■■□□□ 1.46
TRIP4-211ENST00000560920 AGBL3Q8NEM8 1001 aa24.19■■□□□ 1.46
TRIP4-211ENST00000560920 ZNF609O15014 1411 aa24.18■■□□□ 1.46
TRIP4-211ENST00000560920 ZNF853P0CG23 659 aa24.18■■□□□ 1.46
TRIP4-211ENST00000560920 ANGEL2Q5VTE6 544 aaKnown RBP24.18■■□□□ 1.46
TRIP4-211ENST00000560920 JARID2Q92833 1246 aaPredicted RBP24.18■■□□□ 1.46
TRIP4-211ENST00000560920 GMLQ99445 158 aa24.18■■□□□ 1.46
TRIP4-211ENST00000560920 MYD88Q99836 296 aa24.18■■□□□ 1.46
TRIP4-211ENST00000560920 AKAP11Q9UKA4 1901 aa24.18■■□□□ 1.46
TRIP4-211ENST00000560920 GOLGA2Q08379 1002 aa24.17■■□□□ 1.46
TRIP4-211ENST00000560920 WDR43Q15061 677 aaKnown RBP eCLIP24.17■■□□□ 1.46
TRIP4-211ENST00000560920 PCCAP05165 728 aaPredicted RBP24.16■■□□□ 1.46
TRIP4-211ENST00000560920 HSP90B1P14625 803 aaKnown RBP24.16■■□□□ 1.46
TRIP4-211ENST00000560920 CCDC152Q4G0S7 254 aa24.16■■□□□ 1.46
TRIP4-211ENST00000560920 RASAL3Q86YV0 1011 aa24.16■■□□□ 1.46
TRIP4-211ENST00000560920 CCDC191Q8NCU4 936 aa24.16■■□□□ 1.46
TRIP4-211ENST00000560920 CCDC85AQ96PX6 553 aaPredicted RBP24.16■■□□□ 1.46
TRIP4-211ENST00000560920 PDE8AO60658 829 aa24.15■■□□□ 1.46
TRIP4-211ENST00000560920 ELL2O00472 640 aaPredicted RBP24.14■■□□□ 1.45
TRIP4-211ENST00000560920 USP17L8P0C7I0 530 aa24.14■■□□□ 1.45
TRIP4-211ENST00000560920 SOX10P56693 466 aa24.14■■□□□ 1.45
TRIP4-211ENST00000560920 MYOZ2Q9NPC6 264 aa24.14■■□□□ 1.45
TRIP4-211ENST00000560920 PSME4Q14997 1843 aa24.13■■□□□ 1.45
TRIP4-211ENST00000560920 WTIPA6NIX2 430 aaPredicted RBP24.13■■□□□ 1.45
TRIP4-211ENST00000560920 FKBP1BP68106 108 aa24.13■■□□□ 1.45
TRIP4-211ENST00000560920 DDX10Q13206 875 aaKnown RBP24.13■■□□□ 1.45
TRIP4-211ENST00000560920 REM2Q8IYK8 340 aaPredicted RBP24.13■■□□□ 1.45
TRIP4-211ENST00000560920 CWC25Q9NXE8 425 aaPredicted RBP24.13■■□□□ 1.45
TRIP4-211ENST00000560920 XDHP47989 1333 aa24.12■■□□□ 1.45
TRIP4-211ENST00000560920 USP17L3A6NCW0 530 aa24.12■■□□□ 1.45
TRIP4-211ENST00000560920 USP17L4A6NCW7 530 aa24.12■■□□□ 1.45
TRIP4-211ENST00000560920 MOB2Q70IA6 237 aa24.12■■□□□ 1.45
TRIP4-211ENST00000560920 USP17L1Q7RTZ2 530 aa24.12■■□□□ 1.45
TRIP4-211ENST00000560920 PODNQ7Z5L7 613 aa24.12■■□□□ 1.45
TRIP4-211ENST00000560920 ANKRD18AQ8IVF6 992 aa24.12■■□□□ 1.45
TRIP4-211ENST00000560920 SCAF8Q9UPN6 1271 aaKnown RBP24.12■■□□□ 1.45
TRIP4-211ENST00000560920 PITPNM2Q9BZ72 1349 aa24.11■■□□□ 1.45
TRIP4-211ENST00000560920 PDE4DIPQ5VU43 2346 aa24.11■■□□□ 1.45
TRIP4-211ENST00000560920 ATP2B4P23634 1241 aa24.11■■□□□ 1.45
TRIP4-211ENST00000560920 CTU1Q7Z7A3 348 aaKnown RBP24.11■■□□□ 1.45
TRIP4-211ENST00000560920 METTL22Q9BUU2 404 aaPredicted RBP24.11■■□□□ 1.45
TRIP4-211ENST00000560920 IFT57Q9NWB7 429 aa24.11■■□□□ 1.45
TRIP4-211ENST00000560920 C8orf58Q8NAV2 365 aa24.1■■□□□ 1.45
TRIP4-211ENST00000560920 PAPPA2Q9BXP8 1791 aa24.09■■□□□ 1.45
TRIP4-211ENST00000560920 UBE2Q2LH0YL09 131 aa24.09■■□□□ 1.45
TRIP4-211ENST00000560920 PRAMEF18Q5VWM3 479 aa24.09■■□□□ 1.45
TRIP4-211ENST00000560920 GNAI1P63096 354 aa24.08■■□□□ 1.45
TRIP4-211ENST00000560920 NBPF9Q3BBW0 867 aa24.08■■□□□ 1.45
TRIP4-211ENST00000560920 APAF1O14727 1248 aa24.07■■□□□ 1.44
TRIP4-211ENST00000560920 MXD3Q9BW11 206 aa24.07■■□□□ 1.44
TRIP4-211ENST00000560920 MINPP1Q9UNW1 487 aa24.07■■□□□ 1.44
TRIP4-211ENST00000560920 CTSWP56202 376 aa24.06■■□□□ 1.44
TRIP4-211ENST00000560920 DACT2Q5SW24 774 aa24.06■■□□□ 1.44
TRIP4-211ENST00000560920 TTLL11Q8NHH1 800 aa24.06■■□□□ 1.44
TRIP4-211ENST00000560920 MAP3K2Q9Y2U5 619 aa24.06■■□□□ 1.44
TRIP4-211ENST00000560920 TBC1D8O95759 1140 aa24.05■■□□□ 1.44
TRIP4-211ENST00000560920 DDX58O95786 925 aaKnown RBP24.05■■□□□ 1.44
TRIP4-211ENST00000560920 IGKV5-2P06315 115 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms