RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 ABT1Q9ULW3 272 aaKnown RBP8.58□□□□□ -1.04
USP8-213ENST00000560885 COL4A5P29400 1685 aa8.58□□□□□ -1.04
USP8-213ENST00000560885 FAM177BA6PVY3 158 aa8.57□□□□□ -1.04
USP8-213ENST00000560885 HTATSF1O43719 755 aaKnown RBP8.57□□□□□ -1.04
USP8-213ENST00000560885 HOXA10P31260 410 aaPredicted RBP8.57□□□□□ -1.04
USP8-213ENST00000560885 ECE1P42892 770 aa8.57□□□□□ -1.04
USP8-213ENST00000560885 HLFQ16534 295 aa8.57□□□□□ -1.04
USP8-213ENST00000560885 Q6ZNB5 142 aa8.57□□□□□ -1.04
USP8-213ENST00000560885 USP50Q70EL3 339 aaPredicted RBP8.57□□□□□ -1.04
USP8-213ENST00000560885 MCM10Q7L590 875 aa8.57□□□□□ -1.04
USP8-213ENST00000560885 BEGAINQ9BUH8 593 aa8.57□□□□□ -1.04
USP8-213ENST00000560885 NUDCQ9Y266 331 aa8.57□□□□□ -1.04
USP8-213ENST00000560885 ERVV-1B6SEH8 477 aa8.56□□□□□ -1.04
USP8-213ENST00000560885 SCNN1DP51172 638 aa8.56□□□□□ -1.04
USP8-213ENST00000560885 TAF7Q15545 349 aaPredicted RBP8.56□□□□□ -1.04
USP8-213ENST00000560885 ANKK1Q8NFD2 765 aa8.56□□□□□ -1.04
USP8-213ENST00000560885 RPGRQ92834 1020 aaKnown RBP8.56□□□□□ -1.04
USP8-213ENST00000560885 CAPNS2Q96L46 248 aa8.56□□□□□ -1.04
USP8-213ENST00000560885 GPR101Q96P66 508 aaPredicted RBP8.56□□□□□ -1.04
USP8-213ENST00000560885 GJA3Q9Y6H8 435 aa8.56□□□□□ -1.04
USP8-213ENST00000560885 IBTKQ9P2D0 1353 aaPredicted RBP8.56□□□□□ -1.04
USP8-213ENST00000560885 LAMB2P55268 1798 aa8.56□□□□□ -1.04
USP8-213ENST00000560885 ANKRD36CQ5JPF3 1778 aa8.56□□□□□ -1.04
USP8-213ENST00000560885 MAP2K2P36507 400 aa8.55□□□□□ -1.04
USP8-213ENST00000560885 EPS15P42566 896 aa8.55□□□□□ -1.04
USP8-213ENST00000560885 RGS19P49795 217 aa8.55□□□□□ -1.04
USP8-213ENST00000560885 MLLT1Q03111 559 aaPredicted RBP8.55□□□□□ -1.04
USP8-213ENST00000560885 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
USP8-213ENST00000560885 CST9Q5W186 159 aa8.55□□□□□ -1.04
USP8-213ENST00000560885 LARGE2Q8N3Y3 721 aa8.55□□□□□ -1.04
USP8-213ENST00000560885 CCER1Q8TC90 406 aaPredicted RBP8.55□□□□□ -1.04
USP8-213ENST00000560885 ZDHHC16Q969W1 377 aa8.55□□□□□ -1.04
USP8-213ENST00000560885 CRAMP1Q96RY5 1269 aa8.55□□□□□ -1.04
USP8-213ENST00000560885 VPS33BQ9H267 617 aa8.55□□□□□ -1.04
USP8-213ENST00000560885 ABCC12Q96J65 1359 aa8.55□□□□□ -1.04
USP8-213ENST00000560885 MAP3K15Q6ZN16 1313 aa8.54□□□□□ -1.04
USP8-213ENST00000560885 CA12O43570 354 aa8.54□□□□□ -1.04
USP8-213ENST00000560885 U2AF1L5P0DN76 240 aaPredicted RBP8.54□□□□□ -1.04
USP8-213ENST00000560885 U2AF1Q01081 240 aaKnown RBP eCLIP8.54□□□□□ -1.04
USP8-213ENST00000560885 CNGB1Q14028 1251 aaPredicted RBP8.54□□□□□ -1.04
USP8-213ENST00000560885 DCTN1Q14203 1278 aa8.54□□□□□ -1.04
USP8-213ENST00000560885 CYP4F22Q6NT55 531 aa8.54□□□□□ -1.04
USP8-213ENST00000560885 KIF6Q6ZMV9 814 aa8.54□□□□□ -1.04
USP8-213ENST00000560885 PAXIP1Q6ZW49 1069 aaPredicted RBP8.54□□□□□ -1.04
USP8-213ENST00000560885 NUTM1Q86Y26 1132 aa8.54□□□□□ -1.04
USP8-213ENST00000560885 HS6ST3Q8IZP7 471 aa8.54□□□□□ -1.04
USP8-213ENST00000560885 RBM17Q96I25 401 aaKnown RBP8.54□□□□□ -1.04
USP8-213ENST00000560885 HHIPL1Q96JK4 782 aa8.54□□□□□ -1.04
USP8-213ENST00000560885 ADARB2Q9NS39 739 aaKnown RBP8.54□□□□□ -1.04
USP8-213ENST00000560885 RYDENQ9NUL5 291 aaKnown RBP8.54□□□□□ -1.04
USP8-213ENST00000560885 TLL2Q9Y6L7 1015 aa8.54□□□□□ -1.04
USP8-213ENST00000560885 CASP8AP2Q9UKL3 1982 aa8.53□□□□□ -1.04
USP8-213ENST00000560885 CCDC85CA6NKD9 419 aa8.53□□□□□ -1.04
USP8-213ENST00000560885 PPP1R3GB7ZBB8 358 aa8.53□□□□□ -1.04
USP8-213ENST00000560885 PPEF1O14829 653 aaPredicted RBP8.53□□□□□ -1.04
USP8-213ENST00000560885 FMR1Q06787 632 aaKnown RBP eCLIP8.53□□□□□ -1.04
USP8-213ENST00000560885 PPP1R15BQ5SWA1 713 aa8.53□□□□□ -1.04
USP8-213ENST00000560885 SAPCD2Q86UD0 394 aa8.53□□□□□ -1.04
USP8-213ENST00000560885 NIM1KQ8IY84 436 aa8.53□□□□□ -1.04
USP8-213ENST00000560885 PNISRQ8TF01 805 aaKnown RBP8.53□□□□□ -1.04
USP8-213ENST00000560885 CRISPLD2Q9H0B8 497 aa8.53□□□□□ -1.04
USP8-213ENST00000560885 TMX4Q9H1E5 349 aaPredicted RBP8.53□□□□□ -1.04
USP8-213ENST00000560885 GPRC5DQ9NZD1 345 aa8.53□□□□□ -1.04
USP8-213ENST00000560885 RABGEF1Q9UJ41 708 aa8.53□□□□□ -1.04
USP8-213ENST00000560885 UBN2Q6ZU65 1347 aa8.53□□□□□ -1.04
USP8-213ENST00000560885 TRAF5O00463 557 aa8.52□□□□□ -1.05
USP8-213ENST00000560885 GRM1Q13255 1194 aa8.52□□□□□ -1.05
USP8-213ENST00000560885 GIGYF2Q6Y7W6 1299 aaKnown RBP8.52□□□□□ -1.05
USP8-213ENST00000560885 PPP1R42Q7Z4L9 355 aa8.52□□□□□ -1.05
USP8-213ENST00000560885 LAPTM4BQ86VI4 370 aa8.52□□□□□ -1.05
USP8-213ENST00000560885 ZNF34Q8IZ26 560 aa8.52□□□□□ -1.05
USP8-213ENST00000560885 NGEFQ8N5V2 710 aa8.52□□□□□ -1.05
USP8-213ENST00000560885 MIS18AQ9NYP9 233 aa8.52□□□□□ -1.05
USP8-213ENST00000560885 PGAP2Q9UHJ9 254 aa8.52□□□□□ -1.05
USP8-213ENST00000560885 RRP7AQ9Y3A4 280 aaKnown RBP8.52□□□□□ -1.05
USP8-213ENST00000560885 CDHR2Q9BYE9 1310 aa8.52□□□□□ -1.05
USP8-213ENST00000560885 PPIP5K2O43314 1243 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 AOC2O75106 756 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 NTSR2O95665 410 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 GPTP24298 496 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 BRPF1P55201 1214 aaPredicted RBP8.51□□□□□ -1.05
USP8-213ENST00000560885 AOC3Q16853 763 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 PARP10Q53GL7 1025 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 SUSD4Q5VX71 490 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 TTLL7Q6ZT98 887 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 SUPT20HQ8NEM7 779 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
USP8-213ENST00000560885 NLRP3Q96P20 1036 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 ADAM33Q9BZ11 813 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 ZBTB3Q9H5J0 574 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 ZNRF3Q9ULT6 936 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 ATP6V0A2Q9Y487 856 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 LRRC37AA6NMS7 1700 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 TAF1P21675 1872 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 ERBB4Q15303 1308 aa8.51□□□□□ -1.05
USP8-213ENST00000560885 AKAP11Q9UKA4 1901 aa8.5□□□□□ -1.05
USP8-213ENST00000560885 POLR2AP24928 1970 aaKnown RBP8.5□□□□□ -1.05
USP8-213ENST00000560885 TCERG1O14776 1098 aaKnown RBP8.5□□□□□ -1.05
USP8-213ENST00000560885 CELF2O95319 508 aaKnown RBP8.5□□□□□ -1.05
USP8-213ENST00000560885 NEFMP07197 916 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms