RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 BICC1Q9H694 974 aaKnown RBP19.25■□□□□ 0.67
SNRPA1-213ENST00000560856 WDR90Q96KV7 1748 aa19.25■□□□□ 0.67
SNRPA1-213ENST00000560856 C6orf229H3BNL8 230 aa19.24■□□□□ 0.67
SNRPA1-213ENST00000560856 IGHMBP2P38935 993 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-213ENST00000560856 NIM1KQ8IY84 436 aa19.24■□□□□ 0.67
SNRPA1-213ENST00000560856 FRAT1Q92837 279 aaPredicted RBP19.24■□□□□ 0.67
SNRPA1-213ENST00000560856 L3MBTL3Q96JM7 780 aaPredicted RBP19.24■□□□□ 0.67
SNRPA1-213ENST00000560856 XDHP47989 1333 aa19.24■□□□□ 0.67
SNRPA1-213ENST00000560856 YDJCA8MPS7 323 aa19.23■□□□□ 0.67
SNRPA1-213ENST00000560856 UFL1O94874 794 aa19.23■□□□□ 0.67
SNRPA1-213ENST00000560856 VEGFAP15692 232 aaPredicted RBP19.23■□□□□ 0.67
SNRPA1-213ENST00000560856 WASHC4Q2M389 1173 aa19.23■□□□□ 0.67
SNRPA1-213ENST00000560856 ZNF594Q96JF6 807 aaPredicted RBP19.23■□□□□ 0.67
SNRPA1-213ENST00000560856 ANKIB1Q9P2G1 1089 aa19.23■□□□□ 0.67
SNRPA1-213ENST00000560856 GGA1Q9UJY5 639 aa19.23■□□□□ 0.67
SNRPA1-213ENST00000560856 ZNRF3Q9ULT6 936 aa19.23■□□□□ 0.67
SNRPA1-213ENST00000560856 CHMP3Q9Y3E7 222 aa19.23■□□□□ 0.67
SNRPA1-213ENST00000560856 ATP2B4P23634 1241 aa19.22■□□□□ 0.67
SNRPA1-213ENST00000560856 C1QTNF8P60827 252 aa19.22■□□□□ 0.67
SNRPA1-213ENST00000560856 CXCL9Q07325 125 aa19.22■□□□□ 0.67
SNRPA1-213ENST00000560856 ZKSCAN2Q63HK3 967 aa19.22■□□□□ 0.67
SNRPA1-213ENST00000560856 MPHOSPH8Q99549 860 aa19.22■□□□□ 0.67
SNRPA1-213ENST00000560856 SPEF2Q9C093 1822 aa19.21■□□□□ 0.67
SNRPA1-213ENST00000560856 RIMBP2O15034 1052 aa19.21■□□□□ 0.67
SNRPA1-213ENST00000560856 EIF6P56537 245 aaKnown RBP19.21■□□□□ 0.67
SNRPA1-213ENST00000560856 CCDC57Q2TAC2 916 aa19.21■□□□□ 0.67
SNRPA1-213ENST00000560856 GPC2Q8N158 579 aa19.21■□□□□ 0.67
SNRPA1-213ENST00000560856 EYA3Q99504 573 aa19.21■□□□□ 0.67
SNRPA1-213ENST00000560856 MEIS3Q99687 375 aa19.21■□□□□ 0.67
SNRPA1-213ENST00000560856 CHRNDQ07001 517 aa19.2■□□□□ 0.66
SNRPA1-213ENST00000560856 CLUAP1Q96AJ1 413 aa19.2■□□□□ 0.66
SNRPA1-213ENST00000560856 TOMM70O94826 608 aa19.19■□□□□ 0.66
SNRPA1-213ENST00000560856 UBTFL1P0CB47 393 aaPredicted RBP19.19■□□□□ 0.66
SNRPA1-213ENST00000560856 TMEM57Q8N5G2 664 aa19.19■□□□□ 0.66
SNRPA1-213ENST00000560856 ZC3H12CQ9C0D7 883 aaKnown RBP19.19■□□□□ 0.66
SNRPA1-213ENST00000560856 ANKRD2Q9GZV1 360 aa19.19■□□□□ 0.66
SNRPA1-213ENST00000560856 DBNDD1Q9H9R9 158 aa19.19■□□□□ 0.66
SNRPA1-213ENST00000560856 LEMD3Q9Y2U8 911 aa19.19■□□□□ 0.66
SNRPA1-213ENST00000560856 RLBP1P12271 317 aa19.18■□□□□ 0.66
SNRPA1-213ENST00000560856 RFX5P48382 616 aaPredicted RBP19.18■□□□□ 0.66
SNRPA1-213ENST00000560856 DOK7Q18PE1 504 aa19.18■□□□□ 0.66
SNRPA1-213ENST00000560856 LDHAL6AQ6ZMR3 332 aa19.18■□□□□ 0.66
SNRPA1-213ENST00000560856 PUS3Q9BZE2 481 aaKnown RBP19.18■□□□□ 0.66
SNRPA1-213ENST00000560856 KCNQ5Q9NR82 932 aa19.18■□□□□ 0.66
SNRPA1-213ENST00000560856 RIPOR2Q9Y4F9 1068 aa19.18■□□□□ 0.66
SNRPA1-213ENST00000560856 SNAP23O00161 211 aa19.17■□□□□ 0.66
SNRPA1-213ENST00000560856 ECE2O60344 883 aa19.17■□□□□ 0.66
SNRPA1-213ENST00000560856 RAD17O75943 681 aa19.17■□□□□ 0.66
SNRPA1-213ENST00000560856 SCNN1DP51172 638 aa19.17■□□□□ 0.66
SNRPA1-213ENST00000560856 TXNRD3Q86VQ6 643 aa19.17■□□□□ 0.66
SNRPA1-213ENST00000560856 HELBQ8NG08 1087 aaPredicted RBP19.17■□□□□ 0.66
SNRPA1-213ENST00000560856 RBM46Q8TBY0 533 aaKnown RBP19.17■□□□□ 0.66
SNRPA1-213ENST00000560856 LRRFIP2Q9Y608 721 aaKnown RBP19.17■□□□□ 0.66
SNRPA1-213ENST00000560856 GJA3Q9Y6H8 435 aa19.17■□□□□ 0.66
SNRPA1-213ENST00000560856 IRS2Q9Y4H2 1338 aa19.17■□□□□ 0.66
SNRPA1-213ENST00000560856 TAF5LO75529 589 aa19.16■□□□□ 0.66
SNRPA1-213ENST00000560856 TAF7LQ5H9L4 462 aa19.16■□□□□ 0.66
SNRPA1-213ENST00000560856 CIAPIN1Q6FI81 312 aa19.16■□□□□ 0.66
SNRPA1-213ENST00000560856 TAF1DQ9H5J8 278 aaPredicted RBP19.16■□□□□ 0.66
SNRPA1-213ENST00000560856 ZNF804BA4D1E1 1349 aa19.16■□□□□ 0.66
SNRPA1-213ENST00000560856 MED23Q9ULK4 1368 aa19.16■□□□□ 0.66
SNRPA1-213ENST00000560856 KLRK1P26718 216 aa19.15■□□□□ 0.66
SNRPA1-213ENST00000560856 DZIP1LQ8IYY4 767 aaKnown RBP19.15■□□□□ 0.66
SNRPA1-213ENST00000560856 KLHDC4Q8TBB5 520 aa19.15■□□□□ 0.66
SNRPA1-213ENST00000560856 CNNM1Q9NRU3 951 aa19.15■□□□□ 0.66
SNRPA1-213ENST00000560856 HACL1Q9UJ83 578 aa19.15■□□□□ 0.66
SNRPA1-213ENST00000560856 SCN4AP35499 1836 aa19.15■□□□□ 0.66
SNRPA1-213ENST00000560856 SCN9AQ15858 1988 aa19.15■□□□□ 0.66
SNRPA1-213ENST00000560856 IQCA1LA6NCM1 817 aa19.14■□□□□ 0.65
SNRPA1-213ENST00000560856 GNAI3P08754 354 aa19.14■□□□□ 0.65
SNRPA1-213ENST00000560856 POTEIP0CG38 1075 aa19.14■□□□□ 0.65
SNRPA1-213ENST00000560856 POTEJP0CG39 1038 aa19.14■□□□□ 0.65
SNRPA1-213ENST00000560856 PTPN12Q05209 780 aaKnown RBP19.14■□□□□ 0.65
SNRPA1-213ENST00000560856 LRRC24Q50LG9 513 aa19.14■□□□□ 0.65
SNRPA1-213ENST00000560856 C15orf52Q6ZUT6 534 aaKnown RBP19.14■□□□□ 0.65
SNRPA1-213ENST00000560856 RCAN3Q9UKA8 241 aa19.14■□□□□ 0.65
SNRPA1-213ENST00000560856 A0A1B0GUL6 1792 aa19.14■□□□□ 0.65
SNRPA1-213ENST00000560856 PSMD14O00487 310 aa19.13■□□□□ 0.65
SNRPA1-213ENST00000560856 EPS15P42566 896 aa19.13■□□□□ 0.65
SNRPA1-213ENST00000560856 GMPSP49915 693 aaPredicted RBP19.13■□□□□ 0.65
SNRPA1-213ENST00000560856 TNIP1Q15025 636 aa19.13■□□□□ 0.65
SNRPA1-213ENST00000560856 C16orf71Q8IYS4 520 aaPredicted RBP19.13■□□□□ 0.65
SNRPA1-213ENST00000560856 HDAC5Q9UQL6 1122 aa19.13■□□□□ 0.65
SNRPA1-213ENST00000560856 EPHX2P34913 555 aa19.12■□□□□ 0.65
SNRPA1-213ENST00000560856 MTX1Q13505 466 aa19.12■□□□□ 0.65
SNRPA1-213ENST00000560856 PODNQ7Z5L7 613 aa19.12■□□□□ 0.65
SNRPA1-213ENST00000560856 GPRC5DQ9NZD1 345 aa19.12■□□□□ 0.65
SNRPA1-213ENST00000560856 VIL1P09327 827 aaKnown RBP19.11■□□□□ 0.65
SNRPA1-213ENST00000560856 VGLL2Q8N8G2 317 aa19.11■□□□□ 0.65
SNRPA1-213ENST00000560856 ZBTB12Q9Y330 459 aaPredicted RBP19.11■□□□□ 0.65
SNRPA1-213ENST00000560856 ZBTB7BO15156 539 aaPredicted RBP19.1■□□□□ 0.65
SNRPA1-213ENST00000560856 PLIN1O60240 522 aa19.1■□□□□ 0.65
SNRPA1-213ENST00000560856 FSTL1Q12841 308 aa19.1■□□□□ 0.65
SNRPA1-213ENST00000560856 ATG9AQ7Z3C6 839 aa19.1■□□□□ 0.65
SNRPA1-213ENST00000560856 FTSJ3Q8IY81 847 aaKnown RBP19.1■□□□□ 0.65
SNRPA1-213ENST00000560856 PANK1Q8TE04 598 aa19.1■□□□□ 0.65
SNRPA1-213ENST00000560856 COA1Q9GZY4 146 aa19.1■□□□□ 0.65
SNRPA1-213ENST00000560856 MROH5Q6ZUA9 1318 aa19.09■□□□□ 0.65
SNRPA1-213ENST00000560856 SHTN1A0MZ66 631 aa19.09■□□□□ 0.65
SNRPA1-213ENST00000560856 EYA2O00167 538 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms