RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 TMEM87AQ8NBN3 555 aa11.49□□□□□ -0.57
TRPM1-212ENST00000560801 PCCAP05165 728 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-212ENST00000560801 CYP19A1P11511 503 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-212ENST00000560801 RNF41Q9H4P4 317 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-212ENST00000560801 TSPY2A6NKD2 308 aa11.48□□□□□ -0.57
TRPM1-212ENST00000560801 IRX3P78415 501 aaPredicted RBP11.48□□□□□ -0.57
TRPM1-212ENST00000560801 TCP10Q12799 353 aa11.48□□□□□ -0.57
TRPM1-212ENST00000560801 GCKRQ14397 625 aa11.48□□□□□ -0.57
TRPM1-212ENST00000560801 EYA2O00167 538 aa11.48□□□□□ -0.57
TRPM1-212ENST00000560801 TBC1D9BQ66K14 1250 aa11.48□□□□□ -0.57
TRPM1-212ENST00000560801 SH2D4AQ9H788 454 aa11.48□□□□□ -0.57
TRPM1-212ENST00000560801 STX8Q9UNK0 236 aa11.47□□□□□ -0.57
TRPM1-212ENST00000560801 GRAPQ13588 217 aa11.47□□□□□ -0.57
TRPM1-212ENST00000560801 PRPF40BQ6NWY9 871 aaKnown RBP11.47□□□□□ -0.57
TRPM1-212ENST00000560801 GRAPLQ8TC17 118 aaPredicted RBP11.47□□□□□ -0.57
TRPM1-212ENST00000560801 HACL1Q9UJ83 578 aa11.47□□□□□ -0.57
TRPM1-212ENST00000560801 DLC1Q96QB1 1528 aa11.47□□□□□ -0.57
TRPM1-212ENST00000560801 B4DLN1 442 aa11.47□□□□□ -0.57
TRPM1-212ENST00000560801 VAMP4O75379 141 aa11.47□□□□□ -0.57
TRPM1-212ENST00000560801 MRPL12P52815 198 aaKnown RBP11.47□□□□□ -0.57
TRPM1-212ENST00000560801 LINC00116Q8NCU8 138 aa11.47□□□□□ -0.57
TRPM1-212ENST00000560801 SLC10A4Q96EP9 437 aa11.47□□□□□ -0.57
TRPM1-212ENST00000560801 ZNF594Q96JF6 807 aaPredicted RBP11.47□□□□□ -0.57
TRPM1-212ENST00000560801 BICC1Q9H694 974 aaKnown RBP11.47□□□□□ -0.57
TRPM1-212ENST00000560801 LEMD3Q9Y2U8 911 aa11.47□□□□□ -0.57
TRPM1-212ENST00000560801 LMNB1P20700 586 aa11.47□□□□□ -0.57
TRPM1-212ENST00000560801 TGFB2P61812 414 aa11.47□□□□□ -0.57
TRPM1-212ENST00000560801 SEC63Q9UGP8 760 aaKnown RBP11.47□□□□□ -0.57
TRPM1-212ENST00000560801 PARD3Q8TEW0 1356 aa11.46□□□□□ -0.57
TRPM1-212ENST00000560801 SCNN1DP51172 638 aa11.46□□□□□ -0.57
TRPM1-212ENST00000560801 PIBF1Q8WXW3 757 aa11.46□□□□□ -0.57
TRPM1-212ENST00000560801 CD2APQ9Y5K6 639 aa11.46□□□□□ -0.57
TRPM1-212ENST00000560801 MROH5Q6ZUA9 1318 aa11.46□□□□□ -0.57
TRPM1-212ENST00000560801 TCP10L2B9ZVM9 353 aa11.46□□□□□ -0.57
TRPM1-212ENST00000560801 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
TRPM1-212ENST00000560801 CUL5Q93034 780 aa11.46□□□□□ -0.57
TRPM1-212ENST00000560801 SCLT1Q96NL6 688 aa11.46□□□□□ -0.57
TRPM1-212ENST00000560801 MEIS3Q99687 375 aa11.46□□□□□ -0.57
TRPM1-212ENST00000560801 ECHDC1Q9NTX5 307 aa11.46□□□□□ -0.57
TRPM1-212ENST00000560801 MCM9Q9NXL9 1143 aa11.46□□□□□ -0.57
TRPM1-212ENST00000560801 PA2G4Q9UQ80 394 aaKnown RBP11.46□□□□□ -0.57
TRPM1-212ENST00000560801 ZNF804BA4D1E1 1349 aa11.46□□□□□ -0.58
TRPM1-212ENST00000560801 VEGFAP15692 232 aaPredicted RBP11.46□□□□□ -0.58
TRPM1-212ENST00000560801 PABPC4Q13310 644 aaKnown RBP eCLIP11.46□□□□□ -0.58
TRPM1-212ENST00000560801 SLC9C2Q5TAH2 1124 aa11.46□□□□□ -0.58
TRPM1-212ENST00000560801 TRIM22Q8IYM9 498 aa11.46□□□□□ -0.58
TRPM1-212ENST00000560801 TRIM27P14373 513 aa11.45□□□□□ -0.58
TRPM1-212ENST00000560801 G2E3Q7L622 706 aa11.45□□□□□ -0.58
TRPM1-212ENST00000560801 RAB3GAP1Q15042 981 aa11.45□□□□□ -0.58
TRPM1-212ENST00000560801 TBC1D10BQ4KMP7 808 aaPredicted RBP11.45□□□□□ -0.58
TRPM1-212ENST00000560801 LPIN2Q92539 896 aa11.45□□□□□ -0.58
TRPM1-212ENST00000560801 KDM5AP29375 1690 aaKnown RBP11.45□□□□□ -0.58
TRPM1-212ENST00000560801 MAGEB6P1A0A0J9YX57 407 aa11.45□□□□□ -0.58
TRPM1-212ENST00000560801 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
TRPM1-212ENST00000560801 IREB2P48200 963 aaKnown RBP11.45□□□□□ -0.58
TRPM1-212ENST00000560801 MKRN3Q13064 507 aaKnown RBP11.45□□□□□ -0.58
TRPM1-212ENST00000560801 CWC27Q6UX04 472 aaKnown RBP11.45□□□□□ -0.58
TRPM1-212ENST00000560801 SUSD4Q5VX71 490 aa11.45□□□□□ -0.58
TRPM1-212ENST00000560801 KRT26Q7Z3Y9 468 aa11.45□□□□□ -0.58
TRPM1-212ENST00000560801 NLRP10Q86W26 655 aa11.45□□□□□ -0.58
TRPM1-212ENST00000560801 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
TRPM1-212ENST00000560801 ARHGAP45Q92619 1136 aa11.45□□□□□ -0.58
TRPM1-212ENST00000560801 CLRN2A0PK11 232 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 USP17L3A6NCW0 530 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 USP17L4A6NCW7 530 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 TSPY3P0CV98 308 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 TSPY8P0CW00 308 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 MX1P20591 662 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 USP17L1Q7RTZ2 530 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 PNMA8AQ86V59 439 aaPredicted RBP11.44□□□□□ -0.58
TRPM1-212ENST00000560801 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 CDC45O75419 566 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 ERICH6BQ5W0A0 696 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 CTCFLQ8NI51 663 aaPredicted RBP11.44□□□□□ -0.58
TRPM1-212ENST00000560801 USP40Q9NVE5 1235 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 SLC4A4Q9Y6R1 1079 aa11.44□□□□□ -0.58
TRPM1-212ENST00000560801 NEURL1BA8MQ27 555 aa11.43□□□□□ -0.58
TRPM1-212ENST00000560801 MIGA1Q8NAN2 632 aa11.43□□□□□ -0.58
TRPM1-212ENST00000560801 U3KPZ7 1027 aaPredicted RBP11.43□□□□□ -0.58
TRPM1-212ENST00000560801 ADAMTSL3P82987 1691 aa11.43□□□□□ -0.58
TRPM1-212ENST00000560801 ZNF213O14771 459 aa11.43□□□□□ -0.58
TRPM1-212ENST00000560801 ATP2B1P20020 1258 aa11.43□□□□□ -0.58
TRPM1-212ENST00000560801 ITPK1Q13572 414 aa11.43□□□□□ -0.58
TRPM1-212ENST00000560801 MRPL50Q8N5N7 158 aaKnown RBP11.43□□□□□ -0.58
TRPM1-212ENST00000560801 AS3MTQ9HBK9 375 aa11.43□□□□□ -0.58
TRPM1-212ENST00000560801 SPDYE4A6NLX3 237 aa11.43□□□□□ -0.58
TRPM1-212ENST00000560801 CHRNDQ07001 517 aa11.43□□□□□ -0.58
TRPM1-212ENST00000560801 TRAF1Q13077 416 aa11.43□□□□□ -0.58
TRPM1-212ENST00000560801 AOC3Q16853 763 aa11.43□□□□□ -0.58
TRPM1-212ENST00000560801 ZFYP08048 801 aaPredicted RBP11.42□□□□□ -0.58
TRPM1-212ENST00000560801 IARSP41252 1262 aaKnown RBP11.42□□□□□ -0.58
TRPM1-212ENST00000560801 ECE1P42892 770 aa11.42□□□□□ -0.58
TRPM1-212ENST00000560801 GADL1Q6ZQY3 521 aa11.42□□□□□ -0.58
TRPM1-212ENST00000560801 CD163L1Q9NR16 1453 aa11.42□□□□□ -0.58
TRPM1-212ENST00000560801 SMARCA5O60264 1052 aaPredicted RBP11.42□□□□□ -0.58
TRPM1-212ENST00000560801 TFCP2Q12800 502 aa11.42□□□□□ -0.58
TRPM1-212ENST00000560801 CERS3Q8IU89 383 aa11.42□□□□□ -0.58
TRPM1-212ENST00000560801 RHPN1Q8TCX5 695 aa11.42□□□□□ -0.58
TRPM1-212ENST00000560801 CNTNAP4Q9C0A0 1308 aa11.42□□□□□ -0.58
TRPM1-212ENST00000560801 LAMC1P11047 1609 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms