RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 RIMBP2O15034 1052 aa20.68■□□□□ 0.9
SPG21-211ENST00000560564 ANKRD18AQ8IVF6 992 aa20.68■□□□□ 0.9
SPG21-211ENST00000560564 ADARB2Q9NS39 739 aaKnown RBP20.68■□□□□ 0.9
SPG21-211ENST00000560564 TRPM7Q96QT4 1865 aa20.68■□□□□ 0.9
SPG21-211ENST00000560564 F6X3S4 739 aa20.67■□□□□ 0.9
SPG21-211ENST00000560564 TNIP1Q15025 636 aa20.67■□□□□ 0.9
SPG21-211ENST00000560564 BEND3Q5T5X7 828 aa20.67■□□□□ 0.9
SPG21-211ENST00000560564 EYA3Q99504 573 aa20.67■□□□□ 0.9
SPG21-211ENST00000560564 ECE2O60344 883 aa20.66■□□□□ 0.9
SPG21-211ENST00000560564 UFL1O94874 794 aa20.66■□□□□ 0.9
SPG21-211ENST00000560564 CDC5LQ99459 802 aaKnown RBP20.66■□□□□ 0.9
SPG21-211ENST00000560564 KCNQ5Q9NR82 932 aa20.66■□□□□ 0.9
SPG21-211ENST00000560564 XDHP47989 1333 aa20.66■□□□□ 0.9
SPG21-211ENST00000560564 ZNF646O15015 1829 aaPredicted RBP20.65■□□□□ 0.9
SPG21-211ENST00000560564 SHTN1A0MZ66 631 aa20.65■□□□□ 0.9
SPG21-211ENST00000560564 PSMD14O00487 310 aa20.65■□□□□ 0.9
SPG21-211ENST00000560564 CSF1RP07333 972 aa20.65■□□□□ 0.9
SPG21-211ENST00000560564 DOK7Q18PE1 504 aa20.65■□□□□ 0.9
SPG21-211ENST00000560564 BSDC1Q9NW68 430 aaPredicted RBP20.65■□□□□ 0.9
SPG21-211ENST00000560564 ANKIB1Q9P2G1 1089 aa20.65■□□□□ 0.9
SPG21-211ENST00000560564 GGA1Q9UJY5 639 aa20.65■□□□□ 0.9
SPG21-211ENST00000560564 A0A1B0GUL6 1792 aa20.64■□□□□ 0.9
SPG21-211ENST00000560564 CNTNAP1P78357 1384 aa20.64■□□□□ 0.89
SPG21-211ENST00000560564 TMEM88BA6NKF7 163 aa20.64■□□□□ 0.89
SPG21-211ENST00000560564 HIRAP54198 1017 aaPredicted RBP20.64■□□□□ 0.89
SPG21-211ENST00000560564 BCL2L13Q9BXK5 485 aa20.64■□□□□ 0.89
SPG21-211ENST00000560564 PGAP2Q9UHJ9 254 aa20.64■□□□□ 0.89
SPG21-211ENST00000560564 MINPP1Q9UNW1 487 aa20.64■□□□□ 0.89
SPG21-211ENST00000560564 ZBTB12Q9Y330 459 aaPredicted RBP20.64■□□□□ 0.89
SPG21-211ENST00000560564 ZNF609O15014 1411 aa20.63■□□□□ 0.89
SPG21-211ENST00000560564 POLR2AP24928 1970 aaKnown RBP20.63■□□□□ 0.89
SPG21-211ENST00000560564 WTIPA6NIX2 430 aaPredicted RBP20.63■□□□□ 0.89
SPG21-211ENST00000560564 FMR1Q06787 632 aaKnown RBP eCLIP20.63■□□□□ 0.89
SPG21-211ENST00000560564 FAM161AQ3B820 660 aa20.63■□□□□ 0.89
SPG21-211ENST00000560564 TRPM4Q8TD43 1214 aa20.63■□□□□ 0.89
SPG21-211ENST00000560564 DPF2Q92785 391 aa20.63■□□□□ 0.89
SPG21-211ENST00000560564 ZC3H12CQ9C0D7 883 aaKnown RBP20.63■□□□□ 0.89
SPG21-211ENST00000560564 CNOT7Q9UIV1 285 aaKnown RBP20.63■□□□□ 0.89
SPG21-211ENST00000560564 MKRN1Q9UHC7 482 aaKnown RBP20.62■□□□□ 0.89
SPG21-211ENST00000560564 E9PSI1 815 aa20.61■□□□□ 0.89
SPG21-211ENST00000560564 CCER2I3L3R5 266 aa20.61■□□□□ 0.89
SPG21-211ENST00000560564 ITGA6P23229 1130 aa20.61■□□□□ 0.89
SPG21-211ENST00000560564 ATP2B4P23634 1241 aa20.61■□□□□ 0.89
SPG21-211ENST00000560564 FOXO4P98177 505 aa20.61■□□□□ 0.89
SPG21-211ENST00000560564 SLFN5Q08AF3 891 aa20.61■□□□□ 0.89
SPG21-211ENST00000560564 MICALL2Q8IY33 904 aa20.61■□□□□ 0.89
SPG21-211ENST00000560564 MED23Q9ULK4 1368 aa20.6■□□□□ 0.89
SPG21-211ENST00000560564 VIL1P09327 827 aaKnown RBP20.6■□□□□ 0.89
SPG21-211ENST00000560564 RPS12P25398 132 aaKnown RBP20.6■□□□□ 0.89
SPG21-211ENST00000560564 ZC3H15Q8WU90 426 aaKnown RBP20.6■□□□□ 0.89
SPG21-211ENST00000560564 RASSF10A6NK89 507 aa20.59■□□□□ 0.89
SPG21-211ENST00000560564 TRAF5O00463 557 aa20.59■□□□□ 0.89
SPG21-211ENST00000560564 EGFRP00533 1210 aa20.59■□□□□ 0.89
SPG21-211ENST00000560564 MRPL50Q8N5N7 158 aaKnown RBP20.59■□□□□ 0.89
SPG21-211ENST00000560564 H7C1D1 291 aa20.58■□□□□ 0.89
SPG21-211ENST00000560564 GRM8O00222 908 aa20.58■□□□□ 0.89
SPG21-211ENST00000560564 CCT4P50991 539 aaKnown RBP20.58■□□□□ 0.89
SPG21-211ENST00000560564 EPHA10Q5JZY3 1008 aa20.58■□□□□ 0.89
SPG21-211ENST00000560564 TRMT2AQ8IZ69 625 aaKnown RBP20.58■□□□□ 0.89
SPG21-211ENST00000560564 ALDH1L1O75891 902 aa20.57■□□□□ 0.88
SPG21-211ENST00000560564 IGHMBP2P38935 993 aaKnown RBP20.57■□□□□ 0.88
SPG21-211ENST00000560564 CST9Q5W186 159 aa20.57■□□□□ 0.88
SPG21-211ENST00000560564 SAMD7Q7Z3H4 446 aa20.57■□□□□ 0.88
SPG21-211ENST00000560564 CDCA7LQ96GN5 454 aa20.57■□□□□ 0.88
SPG21-211ENST00000560564 HSPA1AP0DMV8 641 aaKnown RBP20.56■□□□□ 0.88
SPG21-211ENST00000560564 HSPA1BP0DMV9 641 aaKnown RBP20.56■□□□□ 0.88
SPG21-211ENST00000560564 VEGFBP49765 207 aa20.56■□□□□ 0.88
SPG21-211ENST00000560564 PODNQ7Z5L7 613 aa20.56■□□□□ 0.88
SPG21-211ENST00000560564 SSH1Q8WYL5 1049 aa20.56■□□□□ 0.88
SPG21-211ENST00000560564 GMLQ99445 158 aa20.56■□□□□ 0.88
SPG21-211ENST00000560564 GLIS2Q9BZE0 524 aaPredicted RBP20.56■□□□□ 0.88
SPG21-211ENST00000560564 THSD7BQ9C0I4 1608 aa20.56■□□□□ 0.88
SPG21-211ENST00000560564 TXNRD3Q86VQ6 643 aa20.55■□□□□ 0.88
SPG21-211ENST00000560564 KAZALD1Q96I82 304 aa20.55■□□□□ 0.88
SPG21-211ENST00000560564 SRCIN1Q9C0H9 1055 aa20.55■□□□□ 0.88
SPG21-211ENST00000560564 LEMD3Q9Y2U8 911 aa20.55■□□□□ 0.88
SPG21-211ENST00000560564 ANKRD18BA2A2Z9 1011 aa20.54■□□□□ 0.88
SPG21-211ENST00000560564 TBC1D10BQ4KMP7 808 aaPredicted RBP20.54■□□□□ 0.88
SPG21-211ENST00000560564 RSBN1LQ6PCB5 846 aaPredicted RBP20.54■□□□□ 0.88
SPG21-211ENST00000560564 SLC4A10Q6U841 1118 aa20.54■□□□□ 0.88
SPG21-211ENST00000560564 UTYO14607 1347 aa20.53■□□□□ 0.88
SPG21-211ENST00000560564 IRS2Q9Y4H2 1338 aa20.53■□□□□ 0.88
SPG21-211ENST00000560564 KLRK1P26718 216 aa20.53■□□□□ 0.88
SPG21-211ENST00000560564 ZNF280AP59817 542 aaPredicted RBP20.53■□□□□ 0.88
SPG21-211ENST00000560564 CHRNDQ07001 517 aa20.53■□□□□ 0.88
SPG21-211ENST00000560564 LMBR1LQ6UX01 489 aa20.53■□□□□ 0.88
SPG21-211ENST00000560564 AGBL3Q8NEM8 1001 aa20.53■□□□□ 0.88
SPG21-211ENST00000560564 MPHOSPH8Q99549 860 aa20.53■□□□□ 0.88
SPG21-211ENST00000560564 ANKRD2Q9GZV1 360 aa20.53■□□□□ 0.88
SPG21-211ENST00000560564 ZNF804BA4D1E1 1349 aa20.53■□□□□ 0.88
SPG21-211ENST00000560564 PTPRCP08575 1304 aa20.53■□□□□ 0.88
SPG21-211ENST00000560564 G3V3G9 751 aa20.52■□□□□ 0.88
SPG21-211ENST00000560564 IFIT5Q13325 482 aaKnown RBP20.52■□□□□ 0.88
SPG21-211ENST00000560564 DEFB115Q30KQ5 88 aa20.52■□□□□ 0.88
SPG21-211ENST00000560564 DCAF8Q5TAQ9 597 aa20.52■□□□□ 0.88
SPG21-211ENST00000560564 CDC37L1Q7L3B6 337 aa20.52■□□□□ 0.88
SPG21-211ENST00000560564 C9orf78Q9NZ63 289 aaPredicted RBP20.52■□□□□ 0.88
SPG21-211ENST00000560564 USP17L3A6NCW0 530 aa20.51■□□□□ 0.87
SPG21-211ENST00000560564 USP17L4A6NCW7 530 aa20.51■□□□□ 0.87
SPG21-211ENST00000560564 NBPF7P0C2Y1 421 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms