RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 RPGRQ92834 1020 aaKnown RBP10.22□□□□□ -0.77
LRRC28-219ENST00000560483 MYD88Q99836 296 aa10.22□□□□□ -0.77
LRRC28-219ENST00000560483 TRMT112Q9UI30 125 aaKnown RBP10.22□□□□□ -0.77
LRRC28-219ENST00000560483 CACNA1SQ13698 1873 aa10.21□□□□□ -0.77
LRRC28-219ENST00000560483 CHD4Q14839 1912 aa10.21□□□□□ -0.77
LRRC28-219ENST00000560483 TCIRG1Q13488 830 aa10.21□□□□□ -0.77
LRRC28-219ENST00000560483 MFSD10Q14728 455 aa10.21□□□□□ -0.77
LRRC28-219ENST00000560483 SUSD4Q5VX71 490 aa10.21□□□□□ -0.77
LRRC28-219ENST00000560483 TTLL6Q8N841 843 aa10.21□□□□□ -0.77
LRRC28-219ENST00000560483 PDZRN3Q9UPQ7 1066 aa10.21□□□□□ -0.77
LRRC28-219ENST00000560483 UBN2Q6ZU65 1347 aa10.2□□□□□ -0.78
LRRC28-219ENST00000560483 ZNF34Q8IZ26 560 aa10.2□□□□□ -0.78
LRRC28-219ENST00000560483 CNKSR1Q969H4 720 aa10.2□□□□□ -0.78
LRRC28-219ENST00000560483 CDCA7LQ96GN5 454 aa10.2□□□□□ -0.78
LRRC28-219ENST00000560483 DDX27Q96GQ7 796 aaKnown RBP10.2□□□□□ -0.78
LRRC28-219ENST00000560483 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
LRRC28-219ENST00000560483 TMX4Q9H1E5 349 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-219ENST00000560483 ATP10DQ9P241 1426 aa10.2□□□□□ -0.78
LRRC28-219ENST00000560483 SEPT9Q9UHD8 586 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-219ENST00000560483 RABGEF1Q9UJ41 708 aa10.2□□□□□ -0.78
LRRC28-219ENST00000560483 MAP3K2Q9Y2U5 619 aa10.2□□□□□ -0.78
LRRC28-219ENST00000560483 ANKRD36CQ5JPF3 1778 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 SH3TC1Q8TE82 1336 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 PI4KAP2A4QPH2 592 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 VAMP4O75379 141 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 PDE4AP27815 886 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 LRP10Q7Z4F1 713 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 NLRP10Q86W26 655 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 PI4KAP1Q8N8J0 262 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 MASTLQ96GX5 879 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 WBP1LQ9NX94 342 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 ARFGEF2Q9Y6D5 1785 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 NRXN2Q9P2S2 1712 aa10.19□□□□□ -0.78
LRRC28-219ENST00000560483 C21orf2O43822 256 aa10.18□□□□□ -0.78
LRRC28-219ENST00000560483 HCLS1P14317 486 aaPredicted RBP10.18□□□□□ -0.78
LRRC28-219ENST00000560483 NPR1P16066 1061 aa10.18□□□□□ -0.78
LRRC28-219ENST00000560483 FLIIQ13045 1269 aa10.18□□□□□ -0.78
LRRC28-219ENST00000560483 SLC4A10Q6U841 1118 aa10.18□□□□□ -0.78
LRRC28-219ENST00000560483 KSR2Q6VAB6 950 aa10.18□□□□□ -0.78
LRRC28-219ENST00000560483 ANKK1Q8NFD2 765 aa10.18□□□□□ -0.78
LRRC28-219ENST00000560483 RBM17Q96I25 401 aaKnown RBP10.18□□□□□ -0.78
LRRC28-219ENST00000560483 BCL2L13Q9BXK5 485 aa10.18□□□□□ -0.78
LRRC28-219ENST00000560483 ANKRD31Q8N7Z5 1873 aa10.18□□□□□ -0.78
LRRC28-219ENST00000560483 CACNA1FO60840 1977 aa10.17□□□□□ -0.78
LRRC28-219ENST00000560483 ABCC12Q96J65 1359 aa10.17□□□□□ -0.78
LRRC28-219ENST00000560483 NTSR2O95665 410 aa10.17□□□□□ -0.78
LRRC28-219ENST00000560483 SRGNP10124 158 aa10.17□□□□□ -0.78
LRRC28-219ENST00000560483 KCNA3P22001 575 aa10.17□□□□□ -0.78
LRRC28-219ENST00000560483 ALDH1B1P30837 517 aa10.17□□□□□ -0.78
LRRC28-219ENST00000560483 MAP3K9P80192 1104 aa10.17□□□□□ -0.78
LRRC28-219ENST00000560483 SLFN5Q08AF3 891 aa10.17□□□□□ -0.78
LRRC28-219ENST00000560483 STYK1Q6J9G0 422 aa10.17□□□□□ -0.78
LRRC28-219ENST00000560483 PRPF40BQ6NWY9 871 aaKnown RBP10.17□□□□□ -0.78
LRRC28-219ENST00000560483 G2E3Q7L622 706 aa10.17□□□□□ -0.78
LRRC28-219ENST00000560483 ZNF526Q8TF50 670 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-219ENST00000560483 FAM89AQ96GI7 184 aa10.17□□□□□ -0.78
LRRC28-219ENST00000560483 CWC25Q9NXE8 425 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-219ENST00000560483 KIAA1551Q9HCM1 1747 aa10.16□□□□□ -0.78
LRRC28-219ENST00000560483 ZNF521Q96K83 1311 aa10.16□□□□□ -0.78
LRRC28-219ENST00000560483 SOWAHBA6NEL2 793 aa10.16□□□□□ -0.78
LRRC28-219ENST00000560483 HSP90B1P14625 803 aaKnown RBP10.16□□□□□ -0.78
LRRC28-219ENST00000560483 DDX46Q7L014 1031 aaKnown RBP10.16□□□□□ -0.78
LRRC28-219ENST00000560483 JARID2Q92833 1246 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-219ENST00000560483 METTL22Q9BUU2 404 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-219ENST00000560483 SMC4Q9NTJ3 1288 aa10.16□□□□□ -0.78
LRRC28-219ENST00000560483 KIAA1468Q9P260 1216 aa10.16□□□□□ -0.78
LRRC28-219ENST00000560483 BRCA1P38398 1863 aaKnown RBP10.16□□□□□ -0.78
LRRC28-219ENST00000560483 COL11A2P13942 1736 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-219ENST00000560483 IBTKQ9P2D0 1353 aaPredicted RBP10.15□□□□□ -0.78
LRRC28-219ENST00000560483 RNF123Q5XPI4 1314 aa10.15□□□□□ -0.78
LRRC28-219ENST00000560483 ARFGEF1Q9Y6D6 1849 aa10.15□□□□□ -0.78
LRRC28-219ENST00000560483 IRS4O14654 1257 aaPredicted RBP10.15□□□□□ -0.78
LRRC28-219ENST00000560483 RASSF7Q02833 373 aa10.15□□□□□ -0.78
LRRC28-219ENST00000560483 SOGA3Q5TF21 947 aa10.15□□□□□ -0.78
LRRC28-219ENST00000560483 SYNE4Q8N205 404 aa10.15□□□□□ -0.78
LRRC28-219ENST00000560483 DNAAF4Q8WXU2 420 aa10.15□□□□□ -0.78
LRRC28-219ENST00000560483 ZFRQ96KR1 1074 aaKnown RBP10.15□□□□□ -0.78
LRRC28-219ENST00000560483 CCDC85AQ96PX6 553 aaPredicted RBP10.15□□□□□ -0.78
LRRC28-219ENST00000560483 ISCA1Q9BUE6 129 aa10.15□□□□□ -0.78
LRRC28-219ENST00000560483 RNF181Q9P0P0 153 aa10.15□□□□□ -0.78
LRRC28-219ENST00000560483 DLEC1Q9Y238 1755 aa10.15□□□□□ -0.78
LRRC28-219ENST00000560483 F6X3S4 739 aa10.14□□□□□ -0.79
LRRC28-219ENST00000560483 PPEF1O14829 653 aaPredicted RBP10.14□□□□□ -0.79
LRRC28-219ENST00000560483 CWF19L2Q2TBE0 894 aaKnown RBP10.14□□□□□ -0.79
LRRC28-219ENST00000560483 C9orf131Q5VYM1 1079 aa10.14□□□□□ -0.79
LRRC28-219ENST00000560483 Q6ZNB5 142 aa10.14□□□□□ -0.79
LRRC28-219ENST00000560483 ZBTB38Q8NAP3 1195 aaPredicted RBP10.14□□□□□ -0.79
LRRC28-219ENST00000560483 CCDC191Q8NCU4 936 aa10.14□□□□□ -0.79
LRRC28-219ENST00000560483 YTHDC1Q96MU7 727 aaKnown RBP10.14□□□□□ -0.79
LRRC28-219ENST00000560483 TNRC6CQ9HCJ0 1690 aaKnown RBP10.14□□□□□ -0.79
LRRC28-219ENST00000560483 SLX4Q8IY92 1834 aa10.13□□□□□ -0.79
LRRC28-219ENST00000560483 CCDC93Q567U6 631 aa10.13□□□□□ -0.79
LRRC28-219ENST00000560483 TAOK3Q9H2K8 898 aa10.13□□□□□ -0.79
LRRC28-219ENST00000560483 C9orf78Q9NZ63 289 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-219ENST00000560483 CHMP3Q9Y3E7 222 aa10.13□□□□□ -0.79
LRRC28-219ENST00000560483 ADCY9O60503 1353 aa10.13□□□□□ -0.79
LRRC28-219ENST00000560483 NEURL1BA8MQ27 555 aa10.12□□□□□ -0.79
LRRC28-219ENST00000560483 UBE3BQ7Z3V4 1068 aa10.12□□□□□ -0.79
LRRC28-219ENST00000560483 SSH1Q8WYL5 1049 aa10.12□□□□□ -0.79
LRRC28-219ENST00000560483 GPBP1L1Q9HC44 474 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms