RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ATP2B4P23634 1241 aa17.47■□□□□ 0.39
PKNOX1-209ENST00000560448 MTX1Q13505 466 aa17.47■□□□□ 0.39
PKNOX1-209ENST00000560448 OLFM4Q6UX06 510 aa17.47■□□□□ 0.39
PKNOX1-209ENST00000560448 ANKIB1Q9P2G1 1089 aa17.47■□□□□ 0.39
PKNOX1-209ENST00000560448 MINPP1Q9UNW1 487 aa17.47■□□□□ 0.39
PKNOX1-209ENST00000560448 CCDC88AQ3V6T2 1871 aa17.47■□□□□ 0.39
PKNOX1-209ENST00000560448 KIAA2012Q0VF49 1180 aa17.47■□□□□ 0.39
PKNOX1-209ENST00000560448 LDHAL6AQ6ZMR3 332 aa17.47■□□□□ 0.39
PKNOX1-209ENST00000560448 GGA1Q9UJY5 639 aa17.47■□□□□ 0.39
PKNOX1-209ENST00000560448 LEMD3Q9Y2U8 911 aa17.47■□□□□ 0.39
PKNOX1-209ENST00000560448 TIAM2Q8IVF5 1701 aa17.46■□□□□ 0.39
PKNOX1-209ENST00000560448 ZBTB7BO15156 539 aaPredicted RBP17.46■□□□□ 0.39
PKNOX1-209ENST00000560448 RLBP1P12271 317 aa17.46■□□□□ 0.39
PKNOX1-209ENST00000560448 MVPQ14764 893 aaKnown RBP17.46■□□□□ 0.39
PKNOX1-209ENST00000560448 DPY19L2Q6NUT2 758 aa17.46■□□□□ 0.39
PKNOX1-209ENST00000560448 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
PKNOX1-209ENST00000560448 LRRFIP2Q9Y608 721 aaKnown RBP17.46■□□□□ 0.39
PKNOX1-209ENST00000560448 DUOX1Q9NRD9 1551 aa17.46■□□□□ 0.38
PKNOX1-209ENST00000560448 COL4A1P02462 1669 aa17.45■□□□□ 0.38
PKNOX1-209ENST00000560448 PPIP5K2O43314 1243 aa17.45■□□□□ 0.38
PKNOX1-209ENST00000560448 GPSM2P81274 684 aa17.45■□□□□ 0.38
PKNOX1-209ENST00000560448 WASHC4Q2M389 1173 aa17.45■□□□□ 0.38
PKNOX1-209ENST00000560448 LARGE2Q8N3Y3 721 aa17.45■□□□□ 0.38
PKNOX1-209ENST00000560448 TBC1D16Q8TBP0 767 aa17.45■□□□□ 0.38
PKNOX1-209ENST00000560448 TNNQ9UQP3 1299 aa17.45■□□□□ 0.38
PKNOX1-209ENST00000560448 MROH5Q6ZUA9 1318 aa17.44■□□□□ 0.38
PKNOX1-209ENST00000560448 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
PKNOX1-209ENST00000560448 FZD9O00144 591 aa17.44■□□□□ 0.38
PKNOX1-209ENST00000560448 PRELPP51888 382 aa17.44■□□□□ 0.38
PKNOX1-209ENST00000560448 NIM1KQ8IY84 436 aa17.44■□□□□ 0.38
PKNOX1-209ENST00000560448 CNNM1Q9NRU3 951 aa17.44■□□□□ 0.38
PKNOX1-209ENST00000560448 SPEF2Q9C093 1822 aa17.43■□□□□ 0.38
PKNOX1-209ENST00000560448 MED23Q9ULK4 1368 aa17.43■□□□□ 0.38
PKNOX1-209ENST00000560448 C6orf229H3BNL8 230 aa17.43■□□□□ 0.38
PKNOX1-209ENST00000560448 UFL1O94874 794 aa17.43■□□□□ 0.38
PKNOX1-209ENST00000560448 CHRNDQ07001 517 aa17.43■□□□□ 0.38
PKNOX1-209ENST00000560448 ERICH6BQ5W0A0 696 aa17.43■□□□□ 0.38
PKNOX1-209ENST00000560448 ZC3H12CQ9C0D7 883 aaKnown RBP17.43■□□□□ 0.38
PKNOX1-209ENST00000560448 GLTPD2A6NH11 291 aa17.42■□□□□ 0.38
PKNOX1-209ENST00000560448 CIAO1O76071 339 aa17.42■□□□□ 0.38
PKNOX1-209ENST00000560448 PANK1Q8TE04 598 aa17.42■□□□□ 0.38
PKNOX1-209ENST00000560448 COPRSQ9NQ92 184 aa17.42■□□□□ 0.38
PKNOX1-209ENST00000560448 POLLQ9UGP5 575 aa17.42■□□□□ 0.38
PKNOX1-209ENST00000560448 RRP1P56182 461 aaKnown RBP17.41■□□□□ 0.38
PKNOX1-209ENST00000560448 AOC3Q16853 763 aa17.41■□□□□ 0.38
PKNOX1-209ENST00000560448 C15orf52Q6ZUT6 534 aaKnown RBP17.41■□□□□ 0.38
PKNOX1-209ENST00000560448 ZNRF3Q9ULT6 936 aa17.41■□□□□ 0.38
PKNOX1-209ENST00000560448 RIPOR2Q9Y4F9 1068 aa17.41■□□□□ 0.38
PKNOX1-209ENST00000560448 SRGAP3O43295 1099 aa17.4■□□□□ 0.38
PKNOX1-209ENST00000560448 KCNJ4P48050 445 aa17.4■□□□□ 0.38
PKNOX1-209ENST00000560448 RFX5P48382 616 aaPredicted RBP17.4■□□□□ 0.38
PKNOX1-209ENST00000560448 EIF6P56537 245 aaKnown RBP17.4■□□□□ 0.38
PKNOX1-209ENST00000560448 PTPN12Q05209 780 aaKnown RBP17.4■□□□□ 0.38
PKNOX1-209ENST00000560448 ZNF784Q8NCA9 323 aaPredicted RBP17.4■□□□□ 0.38
PKNOX1-209ENST00000560448 ZNF804BA4D1E1 1349 aa17.4■□□□□ 0.38
PKNOX1-209ENST00000560448 EYA2O00167 538 aa17.39■□□□□ 0.38
PKNOX1-209ENST00000560448 PLIN1O60240 522 aa17.39■□□□□ 0.38
PKNOX1-209ENST00000560448 UBE4AQ14139 1066 aa17.39■□□□□ 0.38
PKNOX1-209ENST00000560448 GPC2Q8N158 579 aa17.39■□□□□ 0.38
PKNOX1-209ENST00000560448 GPBP1L1Q9HC44 474 aaPredicted RBP17.39■□□□□ 0.38
PKNOX1-209ENST00000560448 A0A1B0GUL6 1792 aa17.39■□□□□ 0.37
PKNOX1-209ENST00000560448 PODNQ7Z5L7 613 aa17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 ZNF594Q96JF6 807 aaPredicted RBP17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 COG6Q9Y2V7 657 aa17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 G3V3G9 751 aa17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 IL15P40933 162 aaPredicted RBP17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 IRX6P78412 446 aaPredicted RBP17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 ATP8B2P98198 1209 aa17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 AAMPQ13685 434 aa17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 DCAF8Q5TAQ9 597 aa17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 L3MBTL3Q96JM7 780 aaPredicted RBP17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 COA1Q9GZY4 146 aa17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 ZBTB40Q9NUA8 1239 aa17.38■□□□□ 0.37
PKNOX1-209ENST00000560448 PDE8BO95263 885 aa17.37■□□□□ 0.37
PKNOX1-209ENST00000560448 TNIP1Q15025 636 aa17.37■□□□□ 0.37
PKNOX1-209ENST00000560448 METTL24Q5JXM2 366 aa17.37■□□□□ 0.37
PKNOX1-209ENST00000560448 SLC51AQ86UW1 340 aa17.37■□□□□ 0.37
PKNOX1-209ENST00000560448 RPAP2Q8IXW5 612 aaPredicted RBP17.37■□□□□ 0.37
PKNOX1-209ENST00000560448 WDR90Q96KV7 1748 aa17.37■□□□□ 0.37
PKNOX1-209ENST00000560448 IQCA1LA6NCM1 817 aa17.36■□□□□ 0.37
PKNOX1-209ENST00000560448 POLA2Q14181 598 aa17.36■□□□□ 0.37
PKNOX1-209ENST00000560448 SSH3Q8TE77 659 aa17.36■□□□□ 0.37
PKNOX1-209ENST00000560448 COL4A5P29400 1685 aa17.35■□□□□ 0.37
PKNOX1-209ENST00000560448 HMMRO75330 724 aa17.35■□□□□ 0.37
PKNOX1-209ENST00000560448 PUM3Q15397 648 aaKnown RBP17.35■□□□□ 0.37
PKNOX1-209ENST00000560448 VGLL2Q8N8G2 317 aa17.35■□□□□ 0.37
PKNOX1-209ENST00000560448 PUS3Q9BZE2 481 aaKnown RBP17.35■□□□□ 0.37
PKNOX1-209ENST00000560448 ZNF609O15014 1411 aa17.34■□□□□ 0.37
PKNOX1-209ENST00000560448 RIMBP2O15034 1052 aa17.34■□□□□ 0.37
PKNOX1-209ENST00000560448 ECE2O60344 883 aa17.34■□□□□ 0.37
PKNOX1-209ENST00000560448 SCN4AP35499 1836 aa17.34■□□□□ 0.37
PKNOX1-209ENST00000560448 LRRC24Q50LG9 513 aa17.34■□□□□ 0.37
PKNOX1-209ENST00000560448 CIAPIN1Q6FI81 312 aa17.34■□□□□ 0.37
PKNOX1-209ENST00000560448 CEP85Q6P2H3 762 aa17.34■□□□□ 0.37
PKNOX1-209ENST00000560448 ZNF804AQ7Z570 1209 aa17.34■□□□□ 0.37
PKNOX1-209ENST00000560448 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
PKNOX1-209ENST00000560448 ZNF541Q9H0D2 1346 aa17.33■□□□□ 0.37
PKNOX1-209ENST00000560448 PNMA6EA0A0J9YXQ4 647 aa17.33■□□□□ 0.36
PKNOX1-209ENST00000560448 TAF5LO75529 589 aa17.33■□□□□ 0.36
PKNOX1-209ENST00000560448 VEGFAP15692 232 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms