RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ECE2O60344 883 aa17.92■□□□□ 0.46
TPM1-223ENST00000560445 VAMP4O75379 141 aa17.92■□□□□ 0.46
TPM1-223ENST00000560445 IGHMBP2P38935 993 aaKnown RBP17.92■□□□□ 0.46
TPM1-223ENST00000560445 EXOSC9Q06265 439 aaKnown RBP17.92■□□□□ 0.46
TPM1-223ENST00000560445 SEC31BQ9NQW1 1179 aa17.92■□□□□ 0.46
TPM1-223ENST00000560445 POLLQ9UGP5 575 aa17.92■□□□□ 0.46
TPM1-223ENST00000560445 H7C1W4 665 aa17.91■□□□□ 0.46
TPM1-223ENST00000560445 RIMBP2O15034 1052 aa17.91■□□□□ 0.46
TPM1-223ENST00000560445 GCKRQ14397 625 aa17.91■□□□□ 0.46
TPM1-223ENST00000560445 CWF19L2Q2TBE0 894 aaKnown RBP17.91■□□□□ 0.46
TPM1-223ENST00000560445 SLC51AQ86UW1 340 aa17.91■□□□□ 0.46
TPM1-223ENST00000560445 TTLL11Q8NHH1 800 aa17.91■□□□□ 0.46
TPM1-223ENST00000560445 AIDAQ96BJ3 306 aa17.91■□□□□ 0.46
TPM1-223ENST00000560445 PLA2G12BQ9BX93 195 aa17.91■□□□□ 0.46
TPM1-223ENST00000560445 DBNDD1Q9H9R9 158 aa17.91■□□□□ 0.46
TPM1-223ENST00000560445 BSDC1Q9NW68 430 aaPredicted RBP17.91■□□□□ 0.46
TPM1-223ENST00000560445 CNOT7Q9UIV1 285 aaKnown RBP17.91■□□□□ 0.46
TPM1-223ENST00000560445 TRPM7Q96QT4 1865 aa17.9■□□□□ 0.46
TPM1-223ENST00000560445 RASSF10A6NK89 507 aa17.9■□□□□ 0.46
TPM1-223ENST00000560445 HSPA1AP0DMV8 641 aaKnown RBP17.9■□□□□ 0.46
TPM1-223ENST00000560445 HSPA1BP0DMV9 641 aaKnown RBP17.9■□□□□ 0.46
TPM1-223ENST00000560445 ECE1P42892 770 aa17.9■□□□□ 0.46
TPM1-223ENST00000560445 DEFB115Q30KQ5 88 aa17.9■□□□□ 0.46
TPM1-223ENST00000560445 PSMD14O00487 310 aa17.89■□□□□ 0.45
TPM1-223ENST00000560445 CDC37L1Q7L3B6 337 aa17.89■□□□□ 0.45
TPM1-223ENST00000560445 G2E3Q7L622 706 aa17.89■□□□□ 0.45
TPM1-223ENST00000560445 MICALL2Q8IY33 904 aa17.89■□□□□ 0.45
TPM1-223ENST00000560445 CCDC85AQ96PX6 553 aaPredicted RBP17.89■□□□□ 0.45
TPM1-223ENST00000560445 MPHOSPH8Q99549 860 aa17.89■□□□□ 0.45
TPM1-223ENST00000560445 ANKRD2Q9GZV1 360 aa17.89■□□□□ 0.45
TPM1-223ENST00000560445 ZNF609O15014 1411 aa17.89■□□□□ 0.45
TPM1-223ENST00000560445 YDJCA8MPS7 323 aa17.88■□□□□ 0.45
TPM1-223ENST00000560445 PODNQ7Z5L7 613 aa17.88■□□□□ 0.45
TPM1-223ENST00000560445 PGAP2Q9UHJ9 254 aa17.88■□□□□ 0.45
TPM1-223ENST00000560445 MED23Q9ULK4 1368 aa17.88■□□□□ 0.45
TPM1-223ENST00000560445 MMP14P50281 582 aa17.87■□□□□ 0.45
TPM1-223ENST00000560445 DOK7Q18PE1 504 aa17.87■□□□□ 0.45
TPM1-223ENST00000560445 AGBL3Q8NEM8 1001 aa17.87■□□□□ 0.45
TPM1-223ENST00000560445 JARID2Q92833 1246 aaPredicted RBP17.87■□□□□ 0.45
TPM1-223ENST00000560445 GREM2Q9H772 168 aa17.87■□□□□ 0.45
TPM1-223ENST00000560445 LEMD3Q9Y2U8 911 aa17.87■□□□□ 0.45
TPM1-223ENST00000560445 E9PSI1 815 aa17.86■□□□□ 0.45
TPM1-223ENST00000560445 VIL1P09327 827 aaKnown RBP17.86■□□□□ 0.45
TPM1-223ENST00000560445 MAP2K1Q02750 393 aaPredicted RBP17.86■□□□□ 0.45
TPM1-223ENST00000560445 ANKRD18BA2A2Z9 1011 aa17.85■□□□□ 0.45
TPM1-223ENST00000560445 ALDH1L1O75891 902 aa17.85■□□□□ 0.45
TPM1-223ENST00000560445 ITGA6P23229 1130 aa17.85■□□□□ 0.45
TPM1-223ENST00000560445 PAXIP1Q6ZW49 1069 aaPredicted RBP17.85■□□□□ 0.45
TPM1-223ENST00000560445 MYO3BQ8WXR4 1341 aa17.85■□□□□ 0.45
TPM1-223ENST00000560445 DCPSQ96C86 337 aaKnown RBP17.85■□□□□ 0.45
TPM1-223ENST00000560445 MINPP1Q9UNW1 487 aa17.85■□□□□ 0.45
TPM1-223ENST00000560445 USP17L3A6NCW0 530 aa17.84■□□□□ 0.45
TPM1-223ENST00000560445 USP17L4A6NCW7 530 aa17.84■□□□□ 0.45
TPM1-223ENST00000560445 KCNJ4P48050 445 aa17.84■□□□□ 0.45
TPM1-223ENST00000560445 VEGFBP49765 207 aa17.84■□□□□ 0.45
TPM1-223ENST00000560445 CCT4P50991 539 aaKnown RBP17.84■□□□□ 0.45
TPM1-223ENST00000560445 IFIT5Q13325 482 aaKnown RBP17.84■□□□□ 0.45
TPM1-223ENST00000560445 RSBN1LQ6PCB5 846 aaPredicted RBP17.84■□□□□ 0.45
TPM1-223ENST00000560445 USP17L1Q7RTZ2 530 aa17.84■□□□□ 0.45
TPM1-223ENST00000560445 HHIPL1Q96JK4 782 aa17.84■□□□□ 0.45
TPM1-223ENST00000560445 BEGAINQ9BUH8 593 aa17.84■□□□□ 0.45
TPM1-223ENST00000560445 C9orf78Q9NZ63 289 aaPredicted RBP17.84■□□□□ 0.45
TPM1-223ENST00000560445 ZBTB12Q9Y330 459 aaPredicted RBP17.84■□□□□ 0.45
TPM1-223ENST00000560445 PSME4Q14997 1843 aa17.84■□□□□ 0.45
TPM1-223ENST00000560445 SPEF2Q9C093 1822 aa17.84■□□□□ 0.45
TPM1-223ENST00000560445 COL4A1P02462 1669 aa17.83■□□□□ 0.45
TPM1-223ENST00000560445 ZNF521Q96K83 1311 aa17.83■□□□□ 0.44
TPM1-223ENST00000560445 CELF2O95319 508 aaKnown RBP17.83■□□□□ 0.44
TPM1-223ENST00000560445 CSF1RP07333 972 aa17.83■□□□□ 0.44
TPM1-223ENST00000560445 FAM161AQ3B820 660 aa17.83■□□□□ 0.44
TPM1-223ENST00000560445 TRPM4Q8TD43 1214 aa17.83■□□□□ 0.44
TPM1-223ENST00000560445 COA1Q9GZY4 146 aa17.83■□□□□ 0.44
TPM1-223ENST00000560445 TLL2Q9Y6L7 1015 aa17.83■□□□□ 0.44
TPM1-223ENST00000560445 WDR33Q9C0J8 1336 aaKnown RBP17.82■□□□□ 0.44
TPM1-223ENST00000560445 GRM8O00222 908 aa17.82■□□□□ 0.44
TPM1-223ENST00000560445 CTCFP49711 727 aaPredicted RBP17.82■□□□□ 0.44
TPM1-223ENST00000560445 KIF4BQ2VIQ3 1234 aa17.82■□□□□ 0.44
TPM1-223ENST00000560445 TAF7LQ5H9L4 462 aa17.82■□□□□ 0.44
TPM1-223ENST00000560445 BEND3Q5T5X7 828 aa17.82■□□□□ 0.44
TPM1-223ENST00000560445 SULF1Q8IWU6 871 aa17.82■□□□□ 0.44
TPM1-223ENST00000560445 OGFOD1Q8N543 542 aa17.82■□□□□ 0.44
TPM1-223ENST00000560445 GLIS2Q9BZE0 524 aaPredicted RBP17.82■□□□□ 0.44
TPM1-223ENST00000560445 SRCIN1Q9C0H9 1055 aa17.82■□□□□ 0.44
TPM1-223ENST00000560445 ZNF804BA4D1E1 1349 aa17.81■□□□□ 0.44
TPM1-223ENST00000560445 PTPRCP08575 1304 aa17.81■□□□□ 0.44
TPM1-223ENST00000560445 TRAF5O00463 557 aa17.81■□□□□ 0.44
TPM1-223ENST00000560445 USP17L8P0C7I0 530 aa17.81■□□□□ 0.44
TPM1-223ENST00000560445 CASP7P55210 303 aa17.81■□□□□ 0.44
TPM1-223ENST00000560445 CCDC57Q2TAC2 916 aa17.81■□□□□ 0.44
TPM1-223ENST00000560445 TBC1D10BQ4KMP7 808 aaPredicted RBP17.81■□□□□ 0.44
TPM1-223ENST00000560445 KRT26Q7Z3Y9 468 aa17.81■□□□□ 0.44
TPM1-223ENST00000560445 GPR101Q96P66 508 aaPredicted RBP17.81■□□□□ 0.44
TPM1-223ENST00000560445 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
TPM1-223ENST00000560445 PCNTO95613 3336 aa17.8■□□□□ 0.44
TPM1-223ENST00000560445 HIRAP54198 1017 aaPredicted RBP17.8■□□□□ 0.44
TPM1-223ENST00000560445 SAMD7Q7Z3H4 446 aa17.8■□□□□ 0.44
TPM1-223ENST00000560445 TNS4Q8IZW8 715 aa17.8■□□□□ 0.44
TPM1-223ENST00000560445 CAPNS2Q96L46 248 aa17.8■□□□□ 0.44
TPM1-223ENST00000560445 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
TPM1-223ENST00000560445 SCN9AQ15858 1988 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms