RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 LRRC24Q50LG9 513 aa12.93□□□□□ -0.34
CRTC3-209ENST00000560320 METTL24Q5JXM2 366 aa12.93□□□□□ -0.34
CRTC3-209ENST00000560320 GORABQ5T7V8 394 aa12.93□□□□□ -0.34
CRTC3-209ENST00000560320 ATG9AQ7Z3C6 839 aa12.93□□□□□ -0.34
CRTC3-209ENST00000560320 PI4K2BQ8TCG2 481 aa12.93□□□□□ -0.34
CRTC3-209ENST00000560320 NEUROD6Q96NK8 337 aa12.93□□□□□ -0.34
CRTC3-209ENST00000560320 CDC5LQ99459 802 aaKnown RBP12.93□□□□□ -0.34
CRTC3-209ENST00000560320 MPHOSPH8Q99549 860 aa12.93□□□□□ -0.34
CRTC3-209ENST00000560320 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
CRTC3-209ENST00000560320 DAXXQ9UER7 740 aaPredicted RBP12.93□□□□□ -0.34
CRTC3-209ENST00000560320 HIP1O00291 1037 aa12.92□□□□□ -0.34
CRTC3-209ENST00000560320 ZNF609O15014 1411 aa12.92□□□□□ -0.34
CRTC3-209ENST00000560320 ERFEQ4G0M1 354 aa12.92□□□□□ -0.34
CRTC3-209ENST00000560320 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
CRTC3-209ENST00000560320 DNAJC5GQ8N7S2 189 aa12.92□□□□□ -0.34
CRTC3-209ENST00000560320 EVI5LQ96CN4 794 aa12.92□□□□□ -0.34
CRTC3-209ENST00000560320 NLRP3Q96P20 1036 aa12.92□□□□□ -0.34
CRTC3-209ENST00000560320 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
CRTC3-209ENST00000560320 C22orf23Q9BZE7 217 aa12.92□□□□□ -0.34
CRTC3-209ENST00000560320 MTFR1LQ9H019 292 aa12.92□□□□□ -0.34
CRTC3-209ENST00000560320 TFCP2L1Q9NZI6 479 aa12.92□□□□□ -0.34
CRTC3-209ENST00000560320 MROH5Q6ZUA9 1318 aa12.91□□□□□ -0.34
CRTC3-209ENST00000560320 SLC10A5Q5PT55 438 aa12.91□□□□□ -0.34
CRTC3-209ENST00000560320 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
CRTC3-209ENST00000560320 TBC1D32Q96NH3 1257 aa12.91□□□□□ -0.34
CRTC3-209ENST00000560320 IPO9Q96P70 1041 aaKnown RBP12.91□□□□□ -0.34
CRTC3-209ENST00000560320 A0A1B0GUL7 405 aa12.9□□□□□ -0.34
CRTC3-209ENST00000560320 MSH5O43196 834 aa12.9□□□□□ -0.34
CRTC3-209ENST00000560320 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
CRTC3-209ENST00000560320 ATP5JP18859 108 aa12.9□□□□□ -0.34
CRTC3-209ENST00000560320 SF3B3Q15393 1217 aaKnown RBP12.9□□□□□ -0.34
CRTC3-209ENST00000560320 ATP2B3Q16720 1220 aa12.9□□□□□ -0.34
CRTC3-209ENST00000560320 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
CRTC3-209ENST00000560320 ANKRD18AQ8IVF6 992 aa12.9□□□□□ -0.34
CRTC3-209ENST00000560320 GPBP1L1Q9HC44 474 aaPredicted RBP12.9□□□□□ -0.34
CRTC3-209ENST00000560320 DIAPH3Q9NSV4 1193 aa12.9□□□□□ -0.34
CRTC3-209ENST00000560320 CHMLP26374 656 aa12.89□□□□□ -0.35
CRTC3-209ENST00000560320 ST5P78524 1137 aa12.89□□□□□ -0.35
CRTC3-209ENST00000560320 TTC39AQ5SRH9 613 aa12.89□□□□□ -0.35
CRTC3-209ENST00000560320 PROM2Q8N271 834 aa12.89□□□□□ -0.35
CRTC3-209ENST00000560320 CNBD1Q8NA66 436 aa12.89□□□□□ -0.35
CRTC3-209ENST00000560320 DBNDD2Q9BQY9 259 aa12.89□□□□□ -0.35
CRTC3-209ENST00000560320 BOLA2Q9H3K6 86 aa12.89□□□□□ -0.35
CRTC3-209ENST00000560320 TLR7Q9NYK1 1049 aaKnown RBP12.89□□□□□ -0.35
CRTC3-209ENST00000560320 DBNLQ9UJU6 430 aaKnown RBP12.89□□□□□ -0.35
CRTC3-209ENST00000560320 RIPOR2Q9Y4F9 1068 aa12.89□□□□□ -0.35
CRTC3-209ENST00000560320 ARAP2Q8WZ64 1704 aa12.88□□□□□ -0.35
CRTC3-209ENST00000560320 GYS1P13807 737 aa12.88□□□□□ -0.35
CRTC3-209ENST00000560320 SLC5A1P13866 664 aa12.88□□□□□ -0.35
CRTC3-209ENST00000560320 MCCP23508 829 aa12.88□□□□□ -0.35
CRTC3-209ENST00000560320 APLP1P51693 650 aa12.88□□□□□ -0.35
CRTC3-209ENST00000560320 TIMM10P62072 90 aa12.88□□□□□ -0.35
CRTC3-209ENST00000560320 BECN1Q14457 450 aa12.88□□□□□ -0.35
CRTC3-209ENST00000560320 NFIXQ14938 502 aa12.88□□□□□ -0.35
CRTC3-209ENST00000560320 AMIGO3Q86WK7 504 aa12.88□□□□□ -0.35
CRTC3-209ENST00000560320 ESYT1Q9BSJ8 1104 aa12.88□□□□□ -0.35
CRTC3-209ENST00000560320 FSD1Q9BTV5 496 aa12.88□□□□□ -0.35
CRTC3-209ENST00000560320 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.88□□□□□ -0.35
CRTC3-209ENST00000560320 ABCC12Q96J65 1359 aa12.87□□□□□ -0.35
CRTC3-209ENST00000560320 PDE8BO95263 885 aa12.87□□□□□ -0.35
CRTC3-209ENST00000560320 IFIT1P09914 478 aaKnown RBP12.87□□□□□ -0.35
CRTC3-209ENST00000560320 PUM3Q15397 648 aaKnown RBP12.87□□□□□ -0.35
CRTC3-209ENST00000560320 LRRFIP1Q32MZ4 808 aaKnown RBP12.87□□□□□ -0.35
CRTC3-209ENST00000560320 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
CRTC3-209ENST00000560320 DDX46Q7L014 1031 aaKnown RBP12.87□□□□□ -0.35
CRTC3-209ENST00000560320 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.87□□□□□ -0.35
CRTC3-209ENST00000560320 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
CRTC3-209ENST00000560320 STK32BQ9NY57 414 aa12.87□□□□□ -0.35
CRTC3-209ENST00000560320 MYH7P12883 1935 aa12.87□□□□□ -0.35
CRTC3-209ENST00000560320 QSER1Q2KHR3 1735 aa12.87□□□□□ -0.35
CRTC3-209ENST00000560320 RIC1Q4ADV7 1423 aa12.87□□□□□ -0.35
CRTC3-209ENST00000560320 TAF1P21675 1872 aa12.87□□□□□ -0.35
CRTC3-209ENST00000560320 NLGN1Q8N2Q7 840 aa12.86□□□□□ -0.35
CRTC3-209ENST00000560320 XAGE2Q96GT9 111 aa12.86□□□□□ -0.35
CRTC3-209ENST00000560320 DNAJC2Q99543 621 aaKnown RBP12.86□□□□□ -0.35
CRTC3-209ENST00000560320 HAUS7Q99871 368 aa12.86□□□□□ -0.35
CRTC3-209ENST00000560320 SEC31BQ9NQW1 1179 aa12.86□□□□□ -0.35
CRTC3-209ENST00000560320 A0A1B0GUL6 1792 aa12.86□□□□□ -0.35
CRTC3-209ENST00000560320 RFX7Q2KHR2 1363 aa12.85□□□□□ -0.35
CRTC3-209ENST00000560320 EPB41L2O43491 1005 aaKnown RBP12.85□□□□□ -0.35
CRTC3-209ENST00000560320 SERPINB2P05120 415 aa12.85□□□□□ -0.35
CRTC3-209ENST00000560320 UQCRFS1P1P0C7P4 283 aa12.85□□□□□ -0.35
CRTC3-209ENST00000560320 RBM25P49756 843 aaKnown RBP12.85□□□□□ -0.35
CRTC3-209ENST00000560320 ZNF827Q17R98 1081 aa12.85□□□□□ -0.35
CRTC3-209ENST00000560320 ERICH6Q7L0X2 663 aa12.85□□□□□ -0.35
CRTC3-209ENST00000560320 TICAM2Q86XR7 235 aa12.85□□□□□ -0.35
CRTC3-209ENST00000560320 LPIN2Q92539 896 aa12.85□□□□□ -0.35
CRTC3-209ENST00000560320 TM4SF1P30408 202 aa12.84□□□□□ -0.35
CRTC3-209ENST00000560320 RPS8P62241 208 aaKnown RBP12.84□□□□□ -0.35
CRTC3-209ENST00000560320 SLC15A2Q16348 729 aa12.84□□□□□ -0.35
CRTC3-209ENST00000560320 RPGRQ92834 1020 aaKnown RBP12.84□□□□□ -0.35
CRTC3-209ENST00000560320 ANO2Q9NQ90 1003 aa12.84□□□□□ -0.35
CRTC3-209ENST00000560320 BSDC1Q9NW68 430 aaPredicted RBP12.84□□□□□ -0.35
CRTC3-209ENST00000560320 WDR90Q96KV7 1748 aa12.84□□□□□ -0.35
CRTC3-209ENST00000560320 RAD50Q92878 1312 aa12.84□□□□□ -0.35
CRTC3-209ENST00000560320 TNRC6CQ9HCJ0 1690 aaKnown RBP12.83□□□□□ -0.35
CRTC3-209ENST00000560320 CHRNDQ07001 517 aa12.83□□□□□ -0.36
CRTC3-209ENST00000560320 PRR5LQ6MZQ0 368 aa12.83□□□□□ -0.36
CRTC3-209ENST00000560320 CWC27Q6UX04 472 aaKnown RBP12.83□□□□□ -0.36
CRTC3-209ENST00000560320 COL23A1Q86Y22 540 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms