RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 ST5P78524 1137 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 EPHA10Q5JZY3 1008 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 STYK1Q6J9G0 422 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 PRR5LQ6MZQ0 368 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 CNBD1Q8NA66 436 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 NLRP3Q96P20 1036 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 PHF12Q96QT6 1004 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 LNPKQ9C0E8 428 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 COPRSQ9NQ92 184 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 EXOC6BQ9Y2D4 811 aa7.93□□□□□ -1.14
SPG11-221ENST00000560299 BRCA1P38398 1863 aaKnown RBP7.93□□□□□ -1.14
SPG11-221ENST00000560299 MYH3P11055 1940 aa7.92□□□□□ -1.14
SPG11-221ENST00000560299 HCLS1P14317 486 aaPredicted RBP7.92□□□□□ -1.14
SPG11-221ENST00000560299 SOGA3Q5TF21 947 aa7.92□□□□□ -1.14
SPG11-221ENST00000560299 CC2D2BQ6DHV5 1058 aa7.92□□□□□ -1.14
SPG11-221ENST00000560299 SMIM5Q71RC9 77 aa7.92□□□□□ -1.14
SPG11-221ENST00000560299 CLASRPQ8N2M8 674 aaKnown RBP7.92□□□□□ -1.14
SPG11-221ENST00000560299 TTLL11Q8NHH1 800 aa7.92□□□□□ -1.14
SPG11-221ENST00000560299 RHPN1Q8TCX5 695 aa7.92□□□□□ -1.14
SPG11-221ENST00000560299 PIM2Q9P1W9 311 aa7.92□□□□□ -1.14
SPG11-221ENST00000560299 ZC3H4Q9UPT8 1303 aaKnown RBP7.92□□□□□ -1.14
SPG11-221ENST00000560299 UTRNP46939 3433 aa7.92□□□□□ -1.14
SPG11-221ENST00000560299 H0YIN7 160 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 CIAO1O76071 339 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 SRGNP10124 158 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 ITGA6P23229 1130 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 IL15P40933 162 aaPredicted RBP7.91□□□□□ -1.14
SPG11-221ENST00000560299 PTPN12Q05209 780 aaKnown RBP7.91□□□□□ -1.14
SPG11-221ENST00000560299 ERFEQ4G0M1 354 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 MSL1Q68DK7 614 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 TMC4Q7Z404 712 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 NUTM1Q86Y26 1132 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 SYNE4Q8N205 404 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 CNKSR1Q969H4 720 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 GPATCH3Q96I76 525 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 CDC5LQ99459 802 aaKnown RBP7.91□□□□□ -1.14
SPG11-221ENST00000560299 MPHOSPH8Q99549 860 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 ARFGEF1Q9Y6D6 1849 aa7.91□□□□□ -1.14
SPG11-221ENST00000560299 RTL9Q8NET4 1388 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 LTBP3Q9NS15 1303 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 EYA2O00167 538 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 IFIT2P09913 472 aaKnown RBP7.9□□□□□ -1.14
SPG11-221ENST00000560299 NPR1P16066 1061 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 ALDH1B1P30837 517 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 IGHMBP2P38935 993 aaKnown RBP7.9□□□□□ -1.14
SPG11-221ENST00000560299 RFX5P48382 616 aaPredicted RBP7.9□□□□□ -1.14
SPG11-221ENST00000560299 SF3B3Q15393 1217 aaKnown RBP7.9□□□□□ -1.14
SPG11-221ENST00000560299 FAM161AQ3B820 660 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 LDHAL6AQ6ZMR3 332 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 MASTLQ96GX5 879 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 CRAMP1Q96RY5 1269 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 BCL11AQ9H165 835 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 SIL1Q9H173 461 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 VPS33BQ9H267 617 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 GREM2Q9H772 168 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 CNNM1Q9NRU3 951 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 CEP126Q9P2H0 1117 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 PA2G4Q9UQ80 394 aaKnown RBP7.9□□□□□ -1.14
SPG11-221ENST00000560299 AKAP2Q9Y2D5 859 aa7.9□□□□□ -1.14
SPG11-221ENST00000560299 SMARCA5O60264 1052 aaPredicted RBP7.89□□□□□ -1.15
SPG11-221ENST00000560299 DALRD3Q5D0E6 543 aaKnown RBP7.89□□□□□ -1.15
SPG11-221ENST00000560299 DDX46Q7L014 1031 aaKnown RBP7.89□□□□□ -1.15
SPG11-221ENST00000560299 ANKRD18AQ8IVF6 992 aa7.89□□□□□ -1.15
SPG11-221ENST00000560299 TTLL6Q8N841 843 aa7.89□□□□□ -1.15
SPG11-221ENST00000560299 NLGN2Q8NFZ4 835 aa7.89□□□□□ -1.15
SPG11-221ENST00000560299 C7orf43Q8WVR3 580 aa7.89□□□□□ -1.15
SPG11-221ENST00000560299 CCDC85AQ96PX6 553 aaPredicted RBP7.89□□□□□ -1.15
SPG11-221ENST00000560299 IL1RAPL2Q9NP60 686 aa7.89□□□□□ -1.15
SPG11-221ENST00000560299 ANKRD31Q8N7Z5 1873 aa7.89□□□□□ -1.15
SPG11-221ENST00000560299 AOX1Q06278 1338 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 MROH5Q6ZUA9 1318 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 ERC2O15083 957 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 EIF5BO60841 1220 aaKnown RBP7.88□□□□□ -1.15
SPG11-221ENST00000560299 BBOX1O75936 387 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 DPEP1P16444 411 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 MX1P20591 662 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 MAMSTRQ6ZN01 415 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 KLHDC4Q8TBB5 520 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 RPGRQ92834 1020 aaKnown RBP7.88□□□□□ -1.15
SPG11-221ENST00000560299 RBM17Q96I25 401 aaKnown RBP7.88□□□□□ -1.15
SPG11-221ENST00000560299 ZNF594Q96JF6 807 aaPredicted RBP7.88□□□□□ -1.15
SPG11-221ENST00000560299 OSBPL3Q9H4L5 887 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 GPR108Q9NPR9 543 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 METRNQ9UJH8 293 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 LAMB2P55268 1798 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 CHD4Q14839 1912 aa7.88□□□□□ -1.15
SPG11-221ENST00000560299 DDX60Q8IY21 1712 aaKnown RBP7.87□□□□□ -1.15
SPG11-221ENST00000560299 TTC41PQ6P2S7 1318 aa7.87□□□□□ -1.15
SPG11-221ENST00000560299 SASH1O94885 1247 aa7.87□□□□□ -1.15
SPG11-221ENST00000560299 PDE4AP27815 886 aa7.87□□□□□ -1.15
SPG11-221ENST00000560299 PDE1AP54750 535 aa7.87□□□□□ -1.15
SPG11-221ENST00000560299 RPS8P62241 208 aaKnown RBP7.87□□□□□ -1.15
SPG11-221ENST00000560299 TFCP2Q12800 502 aa7.87□□□□□ -1.15
SPG11-221ENST00000560299 METTL24Q5JXM2 366 aa7.87□□□□□ -1.15
SPG11-221ENST00000560299 AACSQ86V21 672 aa7.87□□□□□ -1.15
SPG11-221ENST00000560299 C2CD5Q86YS7 1000 aa7.87□□□□□ -1.15
SPG11-221ENST00000560299 PLEKHM2Q8IWE5 1019 aa7.87□□□□□ -1.15
SPG11-221ENST00000560299 FAM163AQ96GL9 167 aaPredicted RBP7.87□□□□□ -1.15
SPG11-221ENST00000560299 BSDC1Q9NW68 430 aaPredicted RBP7.87□□□□□ -1.15
SPG11-221ENST00000560299 STAP2Q9UGK3 403 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms