RNA–Protein interactions for RNA: ENST00000560253.1

MEIS3-208, Transcript of Meis homeobox 3, human

TSL 2

Gene MEIS3, Length 1,060 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEIS3-208	ENST00000560253	LDHD	Q86WU2	507 aa		18.88	■□□□□ 0.61
MEIS3-208	ENST00000560253	BCL2L13	Q9BXK5	485 aa		18.88	■□□□□ 0.61
MEIS3-208	ENST00000560253	GREM2	Q9H772	168 aa		18.88	■□□□□ 0.61
MEIS3-208	ENST00000560253	BSDC1	Q9NW68	430 aa	Predicted RBP	18.88	■□□□□ 0.61
MEIS3-208	ENST00000560253	XDH	P47989	1333 aa		18.88	■□□□□ 0.61
MEIS3-208	ENST00000560253	RTL9	Q8NET4	1388 aa		18.88	■□□□□ 0.61
MEIS3-208	ENST00000560253	ANKRD18B	A2A2Z9	1011 aa		18.87	■□□□□ 0.61
MEIS3-208	ENST00000560253	GRM8	O00222	908 aa		18.87	■□□□□ 0.61
MEIS3-208	ENST00000560253	UFL1	O94874	794 aa		18.87	■□□□□ 0.61
MEIS3-208	ENST00000560253	ATP2B4	P23634	1241 aa		18.87	■□□□□ 0.61
MEIS3-208	ENST00000560253	SCN4A	P35499	1836 aa		18.87	■□□□□ 0.61
MEIS3-208	ENST00000560253	TRMT2A	Q8IZ69	625 aa	Known RBP	18.87	■□□□□ 0.61
MEIS3-208	ENST00000560253	TBC1D16	Q8TBP0	767 aa		18.87	■□□□□ 0.61
MEIS3-208	ENST00000560253	SSH1	Q8WYL5	1049 aa		18.87	■□□□□ 0.61
MEIS3-208	ENST00000560253	SMC4	Q9NTJ3	1288 aa		18.87	■□□□□ 0.61
MEIS3-208	ENST00000560253	CHMP3	Q9Y3E7	222 aa		18.87	■□□□□ 0.61
MEIS3-208	ENST00000560253	CSF1R	P07333	972 aa		18.86	■□□□□ 0.61
MEIS3-208	ENST00000560253	ITGA6	P23229	1130 aa		18.86	■□□□□ 0.61
MEIS3-208	ENST00000560253	CXCL9	Q07325	125 aa		18.86	■□□□□ 0.61
MEIS3-208	ENST00000560253	SLC51A	Q86UW1	340 aa		18.86	■□□□□ 0.61
MEIS3-208	ENST00000560253	POLL	Q9UGP5	575 aa		18.86	■□□□□ 0.61
MEIS3-208	ENST00000560253	TAF1	P21675	1872 aa		18.86	■□□□□ 0.61
MEIS3-208	ENST00000560253	IFIT5	Q13325	482 aa	Known RBP	18.85	■□□□□ 0.61
MEIS3-208	ENST00000560253	ANKRD2	Q9GZV1	360 aa		18.85	■□□□□ 0.61
MEIS3-208	ENST00000560253	RAD17	O75943	681 aa		18.84	■□□□□ 0.61
MEIS3-208	ENST00000560253	CASP7	P55210	303 aa		18.84	■□□□□ 0.61
MEIS3-208	ENST00000560253	CCDC57	Q2TAC2	916 aa		18.84	■□□□□ 0.61
MEIS3-208	ENST00000560253	FAM161A	Q3B820	660 aa		18.84	■□□□□ 0.61
MEIS3-208	ENST00000560253	TAF7L	Q5H9L4	462 aa		18.84	■□□□□ 0.61
MEIS3-208	ENST00000560253	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
MEIS3-208	ENST00000560253	USP50	Q70EL3	339 aa	Predicted RBP	18.83	■□□□□ 0.6
MEIS3-208	ENST00000560253	DBNDD1	Q9H9R9	158 aa		18.83	■□□□□ 0.6
MEIS3-208	ENST00000560253	MINPP1	Q9UNW1	487 aa		18.83	■□□□□ 0.6
MEIS3-208	ENST00000560253	LRRC37A	A6NMS7	1700 aa		18.83	■□□□□ 0.6
MEIS3-208	ENST00000560253	MYH3	P11055	1940 aa		18.82	■□□□□ 0.6
MEIS3-208	ENST00000560253		H7C1D1	291 aa		18.82	■□□□□ 0.6
MEIS3-208	ENST00000560253	ECE2	O60344	883 aa		18.82	■□□□□ 0.6
MEIS3-208	ENST00000560253	DOK7	Q18PE1	504 aa		18.82	■□□□□ 0.6
MEIS3-208	ENST00000560253	ADARB2	Q9NS39	739 aa	Known RBP	18.82	■□□□□ 0.6
MEIS3-208	ENST00000560253	LEMD3	Q9Y2U8	911 aa		18.82	■□□□□ 0.6
MEIS3-208	ENST00000560253	EPS15	P42566	896 aa		18.81	■□□□□ 0.6
MEIS3-208	ENST00000560253	KCNJ4	P48050	445 aa		18.81	■□□□□ 0.6
MEIS3-208	ENST00000560253	CCT4	P50991	539 aa	Known RBP	18.81	■□□□□ 0.6
MEIS3-208	ENST00000560253	LMBR1L	Q6UX01	489 aa		18.81	■□□□□ 0.6
MEIS3-208	ENST00000560253	API5	Q9BZZ5	524 aa	Known RBP	18.81	■□□□□ 0.6
MEIS3-208	ENST00000560253	GPRC5D	Q9NZD1	345 aa		18.81	■□□□□ 0.6
MEIS3-208	ENST00000560253	HDAC5	Q9UQL6	1122 aa		18.81	■□□□□ 0.6
MEIS3-208	ENST00000560253	RPS12	P25398	132 aa	Known RBP	18.8	■□□□□ 0.6
MEIS3-208	ENST00000560253	GMPS	P49915	693 aa	Predicted RBP	18.8	■□□□□ 0.6
MEIS3-208	ENST00000560253	SCNN1D	P51172	638 aa		18.8	■□□□□ 0.6
MEIS3-208	ENST00000560253	FOXO4	P98177	505 aa		18.8	■□□□□ 0.6
MEIS3-208	ENST00000560253	DPF2	Q92785	391 aa		18.8	■□□□□ 0.6
MEIS3-208	ENST00000560253	COL4A5	P29400	1685 aa		18.79	■□□□□ 0.6
MEIS3-208	ENST00000560253	FOXN1	O15353	648 aa		18.79	■□□□□ 0.6
MEIS3-208	ENST00000560253	POTEI	P0CG38	1075 aa		18.79	■□□□□ 0.6
MEIS3-208	ENST00000560253	POTEJ	P0CG39	1038 aa		18.79	■□□□□ 0.6
MEIS3-208	ENST00000560253	PODN	Q7Z5L7	613 aa		18.79	■□□□□ 0.6
MEIS3-208	ENST00000560253	PRDM10	Q9NQV6	1147 aa		18.79	■□□□□ 0.6
MEIS3-208	ENST00000560253	YDJC	A8MPS7	323 aa		18.78	■□□□□ 0.6
MEIS3-208	ENST00000560253	IPO8	O15397	1037 aa	Known RBP	18.78	■□□□□ 0.6
MEIS3-208	ENST00000560253	BRPF1	P55201	1214 aa	Predicted RBP	18.78	■□□□□ 0.6
MEIS3-208	ENST00000560253	LDHAL6A	Q6ZMR3	332 aa		18.78	■□□□□ 0.6
MEIS3-208	ENST00000560253	CNTROB	Q8N137	903 aa		18.78	■□□□□ 0.6
MEIS3-208	ENST00000560253	GPR101	Q96P66	508 aa	Predicted RBP	18.78	■□□□□ 0.6
MEIS3-208	ENST00000560253	CNNM1	Q9NRU3	951 aa		18.78	■□□□□ 0.6
MEIS3-208	ENST00000560253	CNOT7	Q9UIV1	285 aa	Known RBP	18.78	■□□□□ 0.6
MEIS3-208	ENST00000560253	KIF16B	Q96L93	1317 aa		18.77	■□□□□ 0.6
MEIS3-208	ENST00000560253	PSMD14	O00487	310 aa		18.77	■□□□□ 0.6
MEIS3-208	ENST00000560253	NOB1	Q9ULX3	412 aa	Known RBP	18.77	■□□□□ 0.6
MEIS3-208	ENST00000560253	DUOX1	Q9NRD9	1551 aa		18.76	■□□□□ 0.59
MEIS3-208	ENST00000560253	ZNF804B	A4D1E1	1349 aa		18.76	■□□□□ 0.59
MEIS3-208	ENST00000560253	UTY	O14607	1347 aa		18.76	■□□□□ 0.59
MEIS3-208	ENST00000560253	RARS	P54136	660 aa	Known RBP	18.76	■□□□□ 0.59
MEIS3-208	ENST00000560253	COA1	Q9GZY4	146 aa		18.76	■□□□□ 0.59
MEIS3-208	ENST00000560253	MED23	Q9ULK4	1368 aa		18.76	■□□□□ 0.59
MEIS3-208	ENST00000560253	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.75	■□□□□ 0.59
MEIS3-208	ENST00000560253	CHRND	Q07001	517 aa		18.75	■□□□□ 0.59
MEIS3-208	ENST00000560253	MAP1S	Q66K74	1059 aa	Predicted RBP	18.75	■□□□□ 0.59
MEIS3-208	ENST00000560253	ZC3H15	Q8WU90	426 aa	Known RBP	18.75	■□□□□ 0.59
MEIS3-208	ENST00000560253	ARHGAP45	Q92619	1136 aa		18.75	■□□□□ 0.59
MEIS3-208	ENST00000560253	SUCLG2	Q96I99	432 aa		18.75	■□□□□ 0.59
MEIS3-208	ENST00000560253	USP17L3	A6NCW0	530 aa		18.74	■□□□□ 0.59
MEIS3-208	ENST00000560253	USP17L4	A6NCW7	530 aa		18.74	■□□□□ 0.59
MEIS3-208	ENST00000560253	VIL1	P09327	827 aa	Known RBP	18.74	■□□□□ 0.59
MEIS3-208	ENST00000560253	EPHA10	Q5JZY3	1008 aa		18.74	■□□□□ 0.59
MEIS3-208	ENST00000560253	USP17L1	Q7RTZ2	530 aa		18.74	■□□□□ 0.59
MEIS3-208	ENST00000560253	MICALL2	Q8IY33	904 aa		18.74	■□□□□ 0.59
MEIS3-208	ENST00000560253	AGBL3	Q8NEM8	1001 aa		18.74	■□□□□ 0.59
MEIS3-208	ENST00000560253	CREBZF	Q9NS37	354 aa		18.74	■□□□□ 0.59
MEIS3-208	ENST00000560253	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.74	■□□□□ 0.59
MEIS3-208	ENST00000560253	COL4A1	P02462	1669 aa		18.73	■□□□□ 0.59
MEIS3-208	ENST00000560253	TMEM88B	A6NKF7	163 aa		18.72	■□□□□ 0.59
MEIS3-208	ENST00000560253	PLIN1	O60240	522 aa		18.72	■□□□□ 0.59
MEIS3-208	ENST00000560253	ITGBL1	O95965	494 aa	Predicted RBP	18.72	■□□□□ 0.59
MEIS3-208	ENST00000560253	UBTFL1	P0CB47	393 aa	Predicted RBP	18.72	■□□□□ 0.59
MEIS3-208	ENST00000560253	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.72	■□□□□ 0.59
MEIS3-208	ENST00000560253	USP44	Q9H0E7	712 aa		18.72	■□□□□ 0.59
MEIS3-208	ENST00000560253	BICC1	Q9H694	974 aa	Known RBP	18.72	■□□□□ 0.59
MEIS3-208	ENST00000560253	KCNQ5	Q9NR82	932 aa		18.72	■□□□□ 0.59
MEIS3-208	ENST00000560253	OGFOD1	Q8N543	542 aa		18.71	■□□□□ 0.59

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