RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 RTL9Q8NET4 1388 aa26.54■■□□□ 1.84
PSEN1-225ENST00000560005 AKAP11Q9UKA4 1901 aa26.53■■□□□ 1.84
PSEN1-225ENST00000560005 ECE2O60344 883 aa26.53■■□□□ 1.84
PSEN1-225ENST00000560005 SLC10A3P09131 477 aa26.53■■□□□ 1.84
PSEN1-225ENST00000560005 DOK7Q18PE1 504 aa26.53■■□□□ 1.84
PSEN1-225ENST00000560005 POLLQ9UGP5 575 aa26.53■■□□□ 1.84
PSEN1-225ENST00000560005 GPSM2P81274 684 aa26.52■■□□□ 1.84
PSEN1-225ENST00000560005 KIF4BQ2VIQ3 1234 aa26.52■■□□□ 1.84
PSEN1-225ENST00000560005 DDX60Q8IY21 1712 aaKnown RBP26.52■■□□□ 1.84
PSEN1-225ENST00000560005 CSRNP1Q96S65 589 aa26.52■■□□□ 1.84
PSEN1-225ENST00000560005 PNNQ9H307 717 aaKnown RBP26.52■■□□□ 1.84
PSEN1-225ENST00000560005 SULF1Q8IWU6 871 aa26.51■■□□□ 1.83
PSEN1-225ENST00000560005 GGA3Q9NZ52 723 aa26.51■■□□□ 1.83
PSEN1-225ENST00000560005 ADAMTS8Q9UP79 889 aa26.51■■□□□ 1.83
PSEN1-225ENST00000560005 CTU1Q7Z7A3 348 aaKnown RBP26.5■■□□□ 1.83
PSEN1-225ENST00000560005 COL4A1P02462 1669 aa26.5■■□□□ 1.83
PSEN1-225ENST00000560005 ASTN2O75129 1339 aaPredicted RBP26.49■■□□□ 1.83
PSEN1-225ENST00000560005 RIPK4P57078 832 aa26.49■■□□□ 1.83
PSEN1-225ENST00000560005 CDCA5Q96FF9 252 aa26.49■■□□□ 1.83
PSEN1-225ENST00000560005 EYA3Q99504 573 aa26.49■■□□□ 1.83
PSEN1-225ENST00000560005 BABAM1Q9NWV8 329 aa26.49■■□□□ 1.83
PSEN1-225ENST00000560005 SF3B3Q15393 1217 aaKnown RBP26.48■■□□□ 1.83
PSEN1-225ENST00000560005 FAM89AQ96GI7 184 aa26.48■■□□□ 1.83
PSEN1-225ENST00000560005 PRPF38BQ5VTL8 546 aaKnown RBP26.47■■□□□ 1.83
PSEN1-225ENST00000560005 TBC1D16Q8TBP0 767 aa26.46■■□□□ 1.83
PSEN1-225ENST00000560005 SCN9AQ15858 1988 aa26.46■■□□□ 1.83
PSEN1-225ENST00000560005 KRT24Q2M2I5 525 aa26.45■■□□□ 1.82
PSEN1-225ENST00000560005 RASAL3Q86YV0 1011 aa26.45■■□□□ 1.82
PSEN1-225ENST00000560005 CHPF2Q9P2E5 772 aa26.45■■□□□ 1.82
PSEN1-225ENST00000560005 ATP5J2-PTCD1G3V325 749 aa26.44■■□□□ 1.82
PSEN1-225ENST00000560005 VIL1P09327 827 aaKnown RBP26.44■■□□□ 1.82
PSEN1-225ENST00000560005 RTL5Q5HYW3 569 aaPredicted RBP26.44■■□□□ 1.82
PSEN1-225ENST00000560005 ISCA1Q9BUE6 129 aa26.44■■□□□ 1.82
PSEN1-225ENST00000560005 HPS5Q9UPZ3 1129 aa26.44■■□□□ 1.82
PSEN1-225ENST00000560005 ANGEL2Q5VTE6 544 aaKnown RBP26.43■■□□□ 1.82
PSEN1-225ENST00000560005 REM2Q8IYK8 340 aaPredicted RBP26.43■■□□□ 1.82
PSEN1-225ENST00000560005 PLBD2Q8NHP8 589 aa26.43■■□□□ 1.82
PSEN1-225ENST00000560005 ZC3H12CQ9C0D7 883 aaKnown RBP26.43■■□□□ 1.82
PSEN1-225ENST00000560005 RPS8P62241 208 aaKnown RBP26.41■■□□□ 1.82
PSEN1-225ENST00000560005 SCARF1Q14162 830 aa26.41■■□□□ 1.82
PSEN1-225ENST00000560005 ANKRD13DQ6ZTN6 518 aa26.41■■□□□ 1.82
PSEN1-225ENST00000560005 G3V3G9 751 aa26.4■■□□□ 1.82
PSEN1-225ENST00000560005 ZNF280AP59817 542 aaPredicted RBP26.4■■□□□ 1.82
PSEN1-225ENST00000560005 LMOD3Q0VAK6 560 aa26.4■■□□□ 1.82
PSEN1-225ENST00000560005 DCAF8Q5TAQ9 597 aa26.4■■□□□ 1.82
PSEN1-225ENST00000560005 PAPPA2Q9BXP8 1791 aa26.39■■□□□ 1.82
PSEN1-225ENST00000560005 IRS4O14654 1257 aaPredicted RBP26.39■■□□□ 1.82
PSEN1-225ENST00000560005 UFL1O94874 794 aa26.39■■□□□ 1.82
PSEN1-225ENST00000560005 TMPOP42166 694 aaKnown RBP26.39■■□□□ 1.82
PSEN1-225ENST00000560005 FKBP1BP68106 108 aa26.38■■□□□ 1.81
PSEN1-225ENST00000560005 HDGFL1Q5TGJ6 251 aa26.38■■□□□ 1.81
PSEN1-225ENST00000560005 RSBN1LQ6PCB5 846 aaPredicted RBP26.38■■□□□ 1.81
PSEN1-225ENST00000560005 PODXL2Q9NZ53 605 aa26.38■■□□□ 1.81
PSEN1-225ENST00000560005 HDAC9Q9UKV0 1011 aa26.38■■□□□ 1.81
PSEN1-225ENST00000560005 NCBP3Q53F19 620 aaKnown RBP26.37■■□□□ 1.81
PSEN1-225ENST00000560005 MOB2Q70IA6 237 aa26.37■■□□□ 1.81
PSEN1-225ENST00000560005 RUNDC1Q96C34 613 aa26.37■■□□□ 1.81
PSEN1-225ENST00000560005 ANKIB1Q9P2G1 1089 aa26.37■■□□□ 1.81
PSEN1-225ENST00000560005 TBC1D8O95759 1140 aa26.36■■□□□ 1.81
PSEN1-225ENST00000560005 PKN2Q16513 984 aaKnown RBP26.36■■□□□ 1.81
PSEN1-225ENST00000560005 AGBL3Q8NEM8 1001 aa26.36■■□□□ 1.81
PSEN1-225ENST00000560005 ZNF296Q8WUU4 475 aaPredicted RBP26.36■■□□□ 1.81
PSEN1-225ENST00000560005 SEC31BQ9NQW1 1179 aa26.36■■□□□ 1.81
PSEN1-225ENST00000560005 GGA1Q9UJY5 639 aa26.36■■□□□ 1.81
PSEN1-225ENST00000560005 SCAF8Q9UPN6 1271 aaKnown RBP26.36■■□□□ 1.81
PSEN1-225ENST00000560005 LAS1LQ9Y4W2 734 aaKnown RBP26.36■■□□□ 1.81
PSEN1-225ENST00000560005 ZNF609O15014 1411 aa26.36■■□□□ 1.81
PSEN1-225ENST00000560005 CHL1O00533 1208 aa26.35■■□□□ 1.81
PSEN1-225ENST00000560005 MYOZ2Q9NPC6 264 aa26.35■■□□□ 1.81
PSEN1-225ENST00000560005 DBF4Q9UBU7 674 aaPredicted RBP26.34■■□□□ 1.81
PSEN1-225ENST00000560005 UBE2Q2LH0YL09 131 aa26.33■■□□□ 1.81
PSEN1-225ENST00000560005 USP17L8P0C7I0 530 aa26.33■■□□□ 1.81
PSEN1-225ENST00000560005 NEUROD2Q15784 382 aa26.33■■□□□ 1.81
PSEN1-225ENST00000560005 PITPNM2Q9BZ72 1349 aa26.33■■□□□ 1.81
PSEN1-225ENST00000560005 TRIM28Q13263 835 aaKnown RBP26.32■■□□□ 1.8
PSEN1-225ENST00000560005 GMLQ99445 158 aa26.32■■□□□ 1.8
PSEN1-225ENST00000560005 PSME4Q14997 1843 aa26.32■■□□□ 1.8
PSEN1-225ENST00000560005 PRAMEF18Q5VWM3 479 aa26.31■■□□□ 1.8
PSEN1-225ENST00000560005 HOXB7P09629 217 aa26.3■■□□□ 1.8
PSEN1-225ENST00000560005 ZBTB38Q8NAP3 1195 aaPredicted RBP26.3■■□□□ 1.8
PSEN1-225ENST00000560005 HYPKQ9NX55 129 aa26.3■■□□□ 1.8
PSEN1-225ENST00000560005 GPR25O00155 361 aa26.28■■□□□ 1.8
PSEN1-225ENST00000560005 TTLL12Q14166 644 aaPredicted RBP26.28■■□□□ 1.8
PSEN1-225ENST00000560005 CCDC146Q8IYE0 955 aa26.28■■□□□ 1.8
PSEN1-225ENST00000560005 CCDC85AQ96PX6 553 aaPredicted RBP26.28■■□□□ 1.8
PSEN1-225ENST00000560005 USP17L3A6NCW0 530 aa26.27■■□□□ 1.8
PSEN1-225ENST00000560005 USP17L4A6NCW7 530 aa26.27■■□□□ 1.8
PSEN1-225ENST00000560005 TM4SF4P48230 202 aa26.27■■□□□ 1.8
PSEN1-225ENST00000560005 MKRN3Q13064 507 aaKnown RBP26.27■■□□□ 1.8
PSEN1-225ENST00000560005 NBPF9Q3BBW0 867 aa26.27■■□□□ 1.8
PSEN1-225ENST00000560005 CCDC152Q4G0S7 254 aa26.27■■□□□ 1.8
PSEN1-225ENST00000560005 FBXO46Q6PJ61 603 aaPredicted RBP26.27■■□□□ 1.8
PSEN1-225ENST00000560005 USP17L1Q7RTZ2 530 aa26.27■■□□□ 1.8
PSEN1-225ENST00000560005 RIC3Q7Z5B4 369 aa26.27■■□□□ 1.8
PSEN1-225ENST00000560005 XDHP47989 1333 aa26.26■■□□□ 1.79
PSEN1-225ENST00000560005 APAF1O14727 1248 aa26.26■■□□□ 1.79
PSEN1-225ENST00000560005 HSP90B1P14625 803 aaKnown RBP26.26■■□□□ 1.79
PSEN1-225ENST00000560005 TRIM35Q9UPQ4 493 aa26.26■■□□□ 1.79
PSEN1-225ENST00000560005 NOM1Q5C9Z4 860 aaKnown RBP26.25■■□□□ 1.79
PSEN1-225ENST00000560005 PODNQ7Z5L7 613 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms