RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 CNNM1Q9NRU3 951 aa10.77□□□□□ -0.69
LRRC28-215ENST00000559774 KIAA1551Q9HCM1 1747 aa10.77□□□□□ -0.69
LRRC28-215ENST00000559774 DLEC1Q9Y238 1755 aa10.77□□□□□ -0.69
LRRC28-215ENST00000559774 MYH3P11055 1940 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 GRIN3BO60391 1043 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 SURF6O75683 361 aaKnown RBP10.76□□□□□ -0.69
LRRC28-215ENST00000559774 IRX6P78412 446 aaPredicted RBP10.76□□□□□ -0.69
LRRC28-215ENST00000559774 ATG9AQ7Z3C6 839 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 SUPT20HQ8NEM7 779 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 GCC1Q96CN9 775 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 PSMD1Q99460 953 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 GPR108Q9NPR9 543 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 CEP126Q9P2H0 1117 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 BCS1LQ9Y276 419 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 LEMD3Q9Y2U8 911 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 XDHP47989 1333 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 LTBP3Q9NS15 1303 aa10.76□□□□□ -0.69
LRRC28-215ENST00000559774 C21orf2O43822 256 aa10.75□□□□□ -0.69
LRRC28-215ENST00000559774 PDE8BO95263 885 aa10.75□□□□□ -0.69
LRRC28-215ENST00000559774 ATP2B4P23634 1241 aa10.75□□□□□ -0.69
LRRC28-215ENST00000559774 CHRNDQ07001 517 aa10.75□□□□□ -0.69
LRRC28-215ENST00000559774 UBE4AQ14139 1066 aa10.75□□□□□ -0.69
LRRC28-215ENST00000559774 MPNDQ8N594 471 aa10.75□□□□□ -0.69
LRRC28-215ENST00000559774 ZNF594Q96JF6 807 aaPredicted RBP10.75□□□□□ -0.69
LRRC28-215ENST00000559774 AKAP2Q9Y2D5 859 aa10.75□□□□□ -0.69
LRRC28-215ENST00000559774 COL11A2P13942 1736 aaPredicted RBP10.75□□□□□ -0.69
LRRC28-215ENST00000559774 DCAF8L1A6NGE4 600 aa10.74□□□□□ -0.69
LRRC28-215ENST00000559774 ZBTB22O15209 634 aa10.74□□□□□ -0.69
LRRC28-215ENST00000559774 LRRC24Q50LG9 513 aa10.74□□□□□ -0.69
LRRC28-215ENST00000559774 METTL24Q5JXM2 366 aa10.74□□□□□ -0.69
LRRC28-215ENST00000559774 DPP8Q6V1X1 898 aaPredicted RBP10.74□□□□□ -0.69
LRRC28-215ENST00000559774 C15orf52Q6ZUT6 534 aaKnown RBP10.74□□□□□ -0.69
LRRC28-215ENST00000559774 VGLL2Q8N8G2 317 aa10.74□□□□□ -0.69
LRRC28-215ENST00000559774 KIF1BPQ96EK5 621 aa10.74□□□□□ -0.69
LRRC28-215ENST00000559774 PUS3Q9BZE2 481 aaKnown RBP10.74□□□□□ -0.69
LRRC28-215ENST00000559774 ANKIB1Q9P2G1 1089 aa10.74□□□□□ -0.69
LRRC28-215ENST00000559774 NSFL1CQ9UNZ2 370 aaKnown RBP10.74□□□□□ -0.69
LRRC28-215ENST00000559774 PA2G4Q9UQ80 394 aaKnown RBP10.74□□□□□ -0.69
LRRC28-215ENST00000559774 SNED1Q8TER0 1413 aa10.74□□□□□ -0.69
LRRC28-215ENST00000559774 FKBP4Q02790 459 aaKnown RBP eCLIP10.73□□□□□ -0.69
LRRC28-215ENST00000559774 OS9Q13438 667 aaPredicted RBP10.73□□□□□ -0.69
LRRC28-215ENST00000559774 PUM3Q15397 648 aaKnown RBP10.73□□□□□ -0.69
LRRC28-215ENST00000559774 SMC5Q8IY18 1101 aa10.73□□□□□ -0.69
LRRC28-215ENST00000559774 KLHDC4Q8TBB5 520 aa10.73□□□□□ -0.69
LRRC28-215ENST00000559774 EYA3Q99504 573 aa10.73□□□□□ -0.69
LRRC28-215ENST00000559774 SIL1Q9H173 461 aa10.73□□□□□ -0.69
LRRC28-215ENST00000559774 GGA1Q9UJY5 639 aa10.73□□□□□ -0.69
LRRC28-215ENST00000559774 SASH1O94885 1247 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 FGFR2P21802 821 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 GPSM2P81274 684 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 GPR162Q16538 588 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 TBC1D16Q8TBP0 767 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 RHPN1Q8TCX5 695 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 LPIN2Q92539 896 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 LRRCC1Q9C099 1032 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 TAOK3Q9H2K8 898 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 PPP4R2Q9NY27 417 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 EXOC6BQ9Y2D4 811 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 ZNF804BA4D1E1 1349 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 LRRC37AA6NMS7 1700 aa10.72□□□□□ -0.69
LRRC28-215ENST00000559774 BRCA1P38398 1863 aaKnown RBP10.72□□□□□ -0.69
LRRC28-215ENST00000559774 IFIT1P09914 478 aaKnown RBP10.71□□□□□ -0.69
LRRC28-215ENST00000559774 YBX3P16989 372 aaKnown RBP eCLIP10.71□□□□□ -0.69
LRRC28-215ENST00000559774 KCNJ4P48050 445 aa10.71□□□□□ -0.69
LRRC28-215ENST00000559774 CLASRPQ8N2M8 674 aaKnown RBP10.71□□□□□ -0.69
LRRC28-215ENST00000559774 POLLQ9UGP5 575 aa10.71□□□□□ -0.69
LRRC28-215ENST00000559774 MED23Q9ULK4 1368 aa10.71□□□□□ -0.69
LRRC28-215ENST00000559774 SLX4Q8IY92 1834 aa10.7□□□□□ -0.7
LRRC28-215ENST00000559774 UFL1O94874 794 aa10.7□□□□□ -0.7
LRRC28-215ENST00000559774 IGHDP01880 384 aa10.7□□□□□ -0.7
LRRC28-215ENST00000559774 SLC5A1P13866 664 aa10.7□□□□□ -0.7
LRRC28-215ENST00000559774 KIAA2012Q0VF49 1180 aa10.7□□□□□ -0.7
LRRC28-215ENST00000559774 TFCP2Q12800 502 aa10.7□□□□□ -0.7
LRRC28-215ENST00000559774 ATP2B3Q16720 1220 aa10.7□□□□□ -0.7
LRRC28-215ENST00000559774 WASHC4Q2M389 1173 aa10.7□□□□□ -0.7
LRRC28-215ENST00000559774 CENPQQ7L2Z9 268 aaPredicted RBP10.7□□□□□ -0.7
LRRC28-215ENST00000559774 ZC3H12CQ9C0D7 883 aaKnown RBP10.7□□□□□ -0.7
LRRC28-215ENST00000559774 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
LRRC28-215ENST00000559774 COL4A1P02462 1669 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 C6orf229H3BNL8 230 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 NFKBIEO00221 500 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 TAF5LO75529 589 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 LMNB1P20700 586 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 TNNI3KQ59H18 835 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 CAVIN4Q5BKX8 364 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 OLFM4Q6UX06 510 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 ARHGAP27Q6ZUM4 889 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 HELBQ8NG08 1087 aaPredicted RBP10.69□□□□□ -0.7
LRRC28-215ENST00000559774 CCDC136Q96JN2 1154 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 FPGT-TNNI3KV9GXZ4 949 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 ARFGEF1Q9Y6D6 1849 aa10.69□□□□□ -0.7
LRRC28-215ENST00000559774 ZC3H4Q9UPT8 1303 aaKnown RBP10.68□□□□□ -0.7
LRRC28-215ENST00000559774 IRS2Q9Y4H2 1338 aa10.68□□□□□ -0.7
LRRC28-215ENST00000559774 A0A1B0GUL7 405 aa10.68□□□□□ -0.7
LRRC28-215ENST00000559774 IARSP41252 1262 aaKnown RBP10.68□□□□□ -0.7
LRRC28-215ENST00000559774 NUCB1Q02818 461 aa10.68□□□□□ -0.7
LRRC28-215ENST00000559774 ZNF804AQ7Z570 1209 aa10.68□□□□□ -0.7
LRRC28-215ENST00000559774 PODNQ7Z5L7 613 aa10.68□□□□□ -0.7
LRRC28-215ENST00000559774 FBXO33Q7Z6M2 555 aa10.68□□□□□ -0.7
LRRC28-215ENST00000559774 PELP1Q8IZL8 1130 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms