RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 GGA1Q9UJY5 639 aa5.51□□□□□ -1.53
SNX1-205ENST00000559339 GJA3Q9Y6H8 435 aa5.51□□□□□ -1.53
SNX1-205ENST00000559339 COL11A2P13942 1736 aaPredicted RBP5.51□□□□□ -1.53
SNX1-205ENST00000559339 XDHP47989 1333 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 TNRC6CQ9HCJ0 1690 aaKnown RBP5.5□□□□□ -1.53
SNX1-205ENST00000559339 UFL1O94874 794 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 CSF1RP07333 972 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 EPHX2P34913 555 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 KCNJ4P48050 445 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 CCT4P50991 539 aaKnown RBP5.5□□□□□ -1.53
SNX1-205ENST00000559339 BRPF1P55201 1214 aaPredicted RBP5.5□□□□□ -1.53
SNX1-205ENST00000559339 GPSM2P81274 684 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 FAM161AQ3B820 660 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 EAPPQ56P03 285 aaPredicted RBP5.5□□□□□ -1.53
SNX1-205ENST00000559339 CIAPIN1Q6FI81 312 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 LMBR1LQ6UX01 489 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 TBC1D16Q8TBP0 767 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 ARHGAP45Q92619 1136 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 ANKRD2Q9GZV1 360 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 POLLQ9UGP5 575 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 NOB1Q9ULX3 412 aaKnown RBP5.5□□□□□ -1.53
SNX1-205ENST00000559339 MINPP1Q9UNW1 487 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 CLEC11AQ9Y240 323 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 RTL9Q8NET4 1388 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 ANKRD36CQ5JPF3 1778 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 ARFGEF2Q9Y6D5 1785 aa5.5□□□□□ -1.53
SNX1-205ENST00000559339 ZBED9Q6R2W3 1325 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 ZNF541Q9H0D2 1346 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 SNED1Q8TER0 1413 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 H7C1D1 291 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 RIMBP2O15034 1052 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 RAD17O75943 681 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 NBPF7P0C2Y1 421 aaPredicted RBP5.49□□□□□ -1.53
SNX1-205ENST00000559339 UBTFL1P0CB47 393 aaPredicted RBP5.49□□□□□ -1.53
SNX1-205ENST00000559339 APLP1P51693 650 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 RARSP54136 660 aaKnown RBP5.49□□□□□ -1.53
SNX1-205ENST00000559339 CASP7P55210 303 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 CXCL9Q07325 125 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 CHADLQ6NUI6 762 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 LDHAL6AQ6ZMR3 332 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 PODNQ7Z5L7 613 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 LDHDQ86WU2 507 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 FRAT1Q92837 279 aaPredicted RBP5.49□□□□□ -1.53
SNX1-205ENST00000559339 TAF1DQ9H5J8 278 aaPredicted RBP5.49□□□□□ -1.53
SNX1-205ENST00000559339 DBNDD1Q9H9R9 158 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 CNNM1Q9NRU3 951 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 LEMD3Q9Y2U8 911 aa5.49□□□□□ -1.53
SNX1-205ENST00000559339 UTYO14607 1347 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 FER1L6Q2WGJ9 1857 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 POTECB2RU33 542 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 ECE2O60344 883 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 RPS12P25398 132 aaKnown RBP5.48□□□□□ -1.53
SNX1-205ENST00000559339 SCNN1DP51172 638 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 FOXO4P98177 505 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 CHRNDQ07001 517 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 DOK7Q18PE1 504 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 USP50Q70EL3 339 aaPredicted RBP5.48□□□□□ -1.53
SNX1-205ENST00000559339 FTSJ3Q8IY81 847 aaKnown RBP5.48□□□□□ -1.53
SNX1-205ENST00000559339 OGFOD1Q8N543 542 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 DPF2Q92785 391 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 COA1Q9GZY4 146 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 USP44Q9H0E7 712 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 BICC1Q9H694 974 aaKnown RBP5.48□□□□□ -1.53
SNX1-205ENST00000559339 ADARB2Q9NS39 739 aaKnown RBP5.48□□□□□ -1.53
SNX1-205ENST00000559339 GPRC5DQ9NZD1 345 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 ZNF804BA4D1E1 1349 aa5.48□□□□□ -1.53
SNX1-205ENST00000559339 CACNA1FO60840 1977 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 SBF1O95248 1867 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 USP17L3A6NCW0 530 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 USP17L4A6NCW7 530 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 PSMD14O00487 310 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 PLIN1O60240 522 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 GNAI3P08754 354 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 EPS15P42566 896 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 GMPSP49915 693 aaPredicted RBP5.47□□□□□ -1.53
SNX1-205ENST00000559339 ZKSCAN2Q63HK3 967 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 ATF7IPQ6VMQ6 1270 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 USP17L1Q7RTZ2 530 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 SLC51AQ86UW1 340 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 VPS37DQ86XT2 251 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 ZC3H15Q8WU90 426 aaKnown RBP5.47□□□□□ -1.53
SNX1-205ENST00000559339 SUCLG2Q96I99 432 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 CNOT7Q9UIV1 285 aaKnown RBP5.47□□□□□ -1.53
SNX1-205ENST00000559339 MROH5Q6ZUA9 1318 aa5.47□□□□□ -1.53
SNX1-205ENST00000559339 MED23Q9ULK4 1368 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 CACNA1SQ13698 1873 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 YDJCA8MPS7 323 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 TAF5LO75529 589 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 BCAR3O75815 825 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 VIL1P09327 827 aaKnown RBP5.46□□□□□ -1.54
SNX1-205ENST00000559339 POTEIP0CG38 1075 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 POTEJP0CG39 1038 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 MS4A1P11836 297 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 TRIM27P14373 513 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 MMP14P50281 582 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 RABL6Q3YEC7 729 aaPredicted RBP5.46□□□□□ -1.54
SNX1-205ENST00000559339 CAVIN4Q5BKX8 364 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 EPHA10Q5JZY3 1008 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 STRIP1Q5VSL9 837 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 INTS3Q68E01 1043 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms