RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 AMPD1P23109 780 aa7.94□□□□□ -1.14
CASC4-207ENST00000559037 ARID4AP29374 1257 aaPredicted RBP7.94□□□□□ -1.14
CASC4-207ENST00000559037 PCBP4P57723 403 aaKnown RBP7.94□□□□□ -1.14
CASC4-207ENST00000559037 MDFIQ99750 246 aa7.94□□□□□ -1.14
CASC4-207ENST00000559037 GSX2Q9BZM3 304 aa7.94□□□□□ -1.14
CASC4-207ENST00000559037 SAP130Q9H0E3 1048 aa7.94□□□□□ -1.14
CASC4-207ENST00000559037 KLF15Q9UIH9 416 aa7.94□□□□□ -1.14
CASC4-207ENST00000559037 CDC42BPBQ9Y5S2 1711 aa7.93□□□□□ -1.14
CASC4-207ENST00000559037 MAP3K6O95382 1288 aa7.93□□□□□ -1.14
CASC4-207ENST00000559037 KCNMA1Q12791 1236 aa7.93□□□□□ -1.14
CASC4-207ENST00000559037 NAA30Q147X3 362 aaPredicted RBP7.93□□□□□ -1.14
CASC4-207ENST00000559037 C1orf229Q6ZS94 237 aaPredicted RBP7.93□□□□□ -1.14
CASC4-207ENST00000559037 MKL2Q9ULH7 1088 aa7.93□□□□□ -1.14
CASC4-207ENST00000559037 CDK11AQ9UQ88 783 aaPredicted RBP7.93□□□□□ -1.14
CASC4-207ENST00000559037 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.93□□□□□ -1.14
CASC4-207ENST00000559037 AKNAQ7Z591 1439 aa7.93□□□□□ -1.14
CASC4-207ENST00000559037 FANCAO15360 1455 aa7.93□□□□□ -1.14
CASC4-207ENST00000559037 FRMPD1Q5SYB0 1578 aa7.93□□□□□ -1.14
CASC4-207ENST00000559037 CFAP74Q9C0B2 1584 aa7.93□□□□□ -1.14
CASC4-207ENST00000559037 KIF14Q15058 1648 aa7.92□□□□□ -1.14
CASC4-207ENST00000559037 RPLP1P05386 114 aaKnown RBP7.92□□□□□ -1.14
CASC4-207ENST00000559037 CHSY3Q70JA7 882 aa7.92□□□□□ -1.14
CASC4-207ENST00000559037 ALYREFQ86V81 257 aaKnown RBP7.92□□□□□ -1.14
CASC4-207ENST00000559037 ETFBKMTQ8IXQ9 262 aa7.92□□□□□ -1.14
CASC4-207ENST00000559037 PIK3R5Q8WYR1 880 aa7.92□□□□□ -1.14
CASC4-207ENST00000559037 BHMTQ93088 406 aa7.92□□□□□ -1.14
CASC4-207ENST00000559037 BTBD6Q96KE9 485 aa7.92□□□□□ -1.14
CASC4-207ENST00000559037 RTCBQ9Y3I0 505 aaKnown RBP7.92□□□□□ -1.14
CASC4-207ENST00000559037 PLCH2O75038 1416 aa7.92□□□□□ -1.14
CASC4-207ENST00000559037 CASKIN1Q8WXD9 1431 aa7.92□□□□□ -1.14
CASC4-207ENST00000559037 OPLAHO14841 1288 aa7.91□□□□□ -1.14
CASC4-207ENST00000559037 SF3B2Q13435 895 aaKnown RBP7.91□□□□□ -1.14
CASC4-207ENST00000559037 CAPN12Q6ZSI9 719 aa7.91□□□□□ -1.14
CASC4-207ENST00000559037 RETREG2Q8NC44 543 aa7.91□□□□□ -1.14
CASC4-207ENST00000559037 FNDC3AQ9Y2H6 1198 aaKnown RBP7.91□□□□□ -1.14
CASC4-207ENST00000559037 ADAMTSL3P82987 1691 aa7.91□□□□□ -1.14
CASC4-207ENST00000559037 SETD1BQ9UPS6 1966 aaKnown RBP7.9□□□□□ -1.14
CASC4-207ENST00000559037 CDC42BPAQ5VT25 1732 aa7.9□□□□□ -1.14
CASC4-207ENST00000559037 DENND4BO75064 1496 aaPredicted RBP7.9□□□□□ -1.14
CASC4-207ENST00000559037 TROQ12816 1431 aaPredicted RBP7.9□□□□□ -1.14
CASC4-207ENST00000559037 ADH7P40394 386 aa7.9□□□□□ -1.14
CASC4-207ENST00000559037 DGKGP49619 791 aa7.9□□□□□ -1.14
CASC4-207ENST00000559037 EFCAB2Q5VUJ9 269 aa7.9□□□□□ -1.14
CASC4-207ENST00000559037 ALKBH2Q6NS38 261 aa7.9□□□□□ -1.14
CASC4-207ENST00000559037 RGL4Q8IZJ4 473 aa7.9□□□□□ -1.14
CASC4-207ENST00000559037 RRAGCQ9HB90 399 aa7.9□□□□□ -1.14
CASC4-207ENST00000559037 SEPT3Q9UH03 358 aa7.9□□□□□ -1.14
CASC4-207ENST00000559037 EGFL7Q9UHF1 273 aa7.9□□□□□ -1.14
CASC4-207ENST00000559037 PCF11O94913 1555 aaKnown RBP7.89□□□□□ -1.15
CASC4-207ENST00000559037 CLIP1P30622 1438 aa7.89□□□□□ -1.15
CASC4-207ENST00000559037 GNB5O14775 395 aa7.89□□□□□ -1.15
CASC4-207ENST00000559037 NFKB1P19838 968 aa7.89□□□□□ -1.15
CASC4-207ENST00000559037 GRNP28799 593 aaKnown RBP7.89□□□□□ -1.15
CASC4-207ENST00000559037 ZAP70P43403 619 aa7.89□□□□□ -1.15
CASC4-207ENST00000559037 GRIN2CQ14957 1233 aa7.89□□□□□ -1.15
CASC4-207ENST00000559037 PHLDB3Q6NSJ2 640 aa7.89□□□□□ -1.15
CASC4-207ENST00000559037 BCORL1Q5H9F3 1711 aa7.89□□□□□ -1.15
CASC4-207ENST00000559037 ZMYM4Q5VZL5 1548 aa7.88□□□□□ -1.15
CASC4-207ENST00000559037 CCDC18Q5T9S5 1454 aa7.88□□□□□ -1.15
CASC4-207ENST00000559037 XYLBO75191 536 aa7.88□□□□□ -1.15
CASC4-207ENST00000559037 PCSK2P16519 638 aa7.88□□□□□ -1.15
CASC4-207ENST00000559037 NPR3P17342 541 aa7.88□□□□□ -1.15
CASC4-207ENST00000559037 RAB44Q7Z6P3 723 aaPredicted RBP7.88□□□□□ -1.15
CASC4-207ENST00000559037 GTF3C2Q8WUA4 911 aaPredicted RBP7.88□□□□□ -1.15
CASC4-207ENST00000559037 UBE2OQ9C0C9 1292 aaKnown RBP7.88□□□□□ -1.15
CASC4-207ENST00000559037 PRDM6Q9NQX0 595 aa7.88□□□□□ -1.15
CASC4-207ENST00000559037 NOP53Q9NZM5 478 aaKnown RBP7.88□□□□□ -1.15
CASC4-207ENST00000559037 KCNMB2Q9Y691 235 aa7.88□□□□□ -1.15
CASC4-207ENST00000559037 SIGLEC1Q9BZZ2 1709 aa7.88□□□□□ -1.15
CASC4-207ENST00000559037 SCAPERQ9BY12 1400 aa7.87□□□□□ -1.15
CASC4-207ENST00000559037 FAM13AO94988 1023 aa7.87□□□□□ -1.15
CASC4-207ENST00000559037 RARAP10276 462 aa7.87□□□□□ -1.15
CASC4-207ENST00000559037 CMTR1Q8N1G2 835 aaKnown RBP7.87□□□□□ -1.15
CASC4-207ENST00000559037 MAGI2Q86UL8 1455 aa7.87□□□□□ -1.15
CASC4-207ENST00000559037 FYCO1Q9BQS8 1478 aa7.87□□□□□ -1.15
CASC4-207ENST00000559037 SPDYE3A6NKU9 549 aa7.86□□□□□ -1.15
CASC4-207ENST00000559037 HOXD8P13378 290 aaPredicted RBP7.86□□□□□ -1.15
CASC4-207ENST00000559037 HOXB4P17483 251 aaPredicted RBP7.86□□□□□ -1.15
CASC4-207ENST00000559037 SOX18P35713 384 aa7.86□□□□□ -1.15
CASC4-207ENST00000559037 GPLD1P80108 840 aa7.86□□□□□ -1.15
CASC4-207ENST00000559037 NOM1Q5C9Z4 860 aaKnown RBP7.86□□□□□ -1.15
CASC4-207ENST00000559037 NLRP13Q86W25 1043 aa7.86□□□□□ -1.15
CASC4-207ENST00000559037 PREX2Q70Z35 1606 aa7.85□□□□□ -1.15
CASC4-207ENST00000559037 ARHGEF40Q8TER5 1519 aa7.85□□□□□ -1.15
CASC4-207ENST00000559037 LOC105371045A0A1W2PR82 267 aa7.85□□□□□ -1.15
CASC4-207ENST00000559037 NRLP54845 237 aa7.85□□□□□ -1.15
CASC4-207ENST00000559037 FKBP4Q02790 459 aaKnown RBP eCLIP7.85□□□□□ -1.15
CASC4-207ENST00000559037 PDE12Q6L8Q7 609 aaKnown RBP7.85□□□□□ -1.15
CASC4-207ENST00000559037 DHX32Q7L7V1 743 aaKnown RBP7.85□□□□□ -1.15
CASC4-207ENST00000559037 TRPM4Q8TD43 1214 aa7.85□□□□□ -1.15
CASC4-207ENST00000559037 DNAJB12Q9NXW2 375 aaKnown RBP7.85□□□□□ -1.15
CASC4-207ENST00000559037 FRRS1LQ9P0K9 344 aa7.85□□□□□ -1.15
CASC4-207ENST00000559037 SLC6A14Q9UN76 642 aa7.85□□□□□ -1.15
CASC4-207ENST00000559037 YEATS2Q9ULM3 1422 aa7.85□□□□□ -1.15
CASC4-207ENST00000559037 CNTNAP5Q8WYK1 1306 aa7.84□□□□□ -1.15
CASC4-207ENST00000559037 ARHGAP5Q13017 1502 aa7.84□□□□□ -1.15
CASC4-207ENST00000559037 UBAP1LF5GYI3 381 aa7.84□□□□□ -1.15
CASC4-207ENST00000559037 PSAPP07602 524 aa7.84□□□□□ -1.15
CASC4-207ENST00000559037 IRS1P35568 1242 aa7.84□□□□□ -1.15
CASC4-207ENST00000559037 USP5P45974 858 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms