RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 PTMAP06454 111 aaKnown RBP15.91■□□□□ 0.14
CPNE6-210ENST00000558995 USPL1Q5W0Q7 1092 aa15.91■□□□□ 0.14
CPNE6-210ENST00000558995 TFCP2Q12800 502 aa15.9■□□□□ 0.14
CPNE6-210ENST00000558995 ZNF330Q9Y3S2 320 aaPredicted RBP15.9■□□□□ 0.14
CPNE6-210ENST00000558995 COL9A3Q14050 684 aaPredicted RBP15.9■□□□□ 0.14
CPNE6-210ENST00000558995 KRT32Q14532 448 aa15.9■□□□□ 0.14
CPNE6-210ENST00000558995 TNS2Q63HR2 1409 aa15.9■□□□□ 0.14
CPNE6-210ENST00000558995 LAMB4A4D0S4 1761 aa15.89■□□□□ 0.14
CPNE6-210ENST00000558995 UBR2Q8IWV8 1755 aa15.89■□□□□ 0.14
CPNE6-210ENST00000558995 DTNBO60941 627 aa15.89■□□□□ 0.13
CPNE6-210ENST00000558995 DMTNQ08495 405 aa15.89■□□□□ 0.13
CPNE6-210ENST00000558995 EDC3Q96F86 508 aaKnown RBP15.89■□□□□ 0.13
CPNE6-210ENST00000558995 TAF6LQ9Y6J9 622 aa15.89■□□□□ 0.13
CPNE6-210ENST00000558995 RFX7Q2KHR2 1363 aa15.89■□□□□ 0.13
CPNE6-210ENST00000558995 TOB2Q14106 344 aaPredicted RBP15.89■□□□□ 0.13
CPNE6-210ENST00000558995 TPRNQ4KMQ1 711 aa15.89■□□□□ 0.13
CPNE6-210ENST00000558995 TCHHQ07283 1943 aa15.89■□□□□ 0.13
CPNE6-210ENST00000558995 HCLS1P14317 486 aaPredicted RBP15.88■□□□□ 0.13
CPNE6-210ENST00000558995 KRT85P78386 507 aa15.88■□□□□ 0.13
CPNE6-210ENST00000558995 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
CPNE6-210ENST00000558995 FUCA2Q9BTY2 467 aa15.88■□□□□ 0.13
CPNE6-210ENST00000558995 ARFGEF2Q9Y6D5 1785 aa15.88■□□□□ 0.13
CPNE6-210ENST00000558995 RGS22Q8NE09 1264 aa15.88■□□□□ 0.13
CPNE6-210ENST00000558995 KCNG1Q9UIX4 513 aa15.88■□□□□ 0.13
CPNE6-210ENST00000558995 CASP7P55210 303 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 DNAJC10Q8IXB1 793 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 TCEANC2Q96MN5 208 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 ATG3Q9NT62 314 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 PAPPAQ13219 1627 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 DISP2A7MBM2 1401 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 GIMAP6Q6P9H5 292 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 CDC37L1Q7L3B6 337 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 HAUS7Q99871 368 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 USP25Q9UHP3 1055 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
CPNE6-210ENST00000558995 ELP1O95163 1332 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 COL16A1Q07092 1604 aaPredicted RBP15.87■□□□□ 0.13
CPNE6-210ENST00000558995 CNPY4Q8N129 248 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 SYTL4Q96C24 671 aaPredicted RBP15.87■□□□□ 0.13
CPNE6-210ENST00000558995 MAP7D2Q96T17 732 aa15.87■□□□□ 0.13
CPNE6-210ENST00000558995 AHDC1Q5TGY3 1603 aaPredicted RBP15.86■□□□□ 0.13
CPNE6-210ENST00000558995 LTBP4Q8N2S1 1624 aa15.86■□□□□ 0.13
CPNE6-210ENST00000558995 KAT6BQ8WYB5 2073 aa15.86■□□□□ 0.13
CPNE6-210ENST00000558995 DBNDD2Q9BQY9 259 aa15.86■□□□□ 0.13
CPNE6-210ENST00000558995 KDM4AO75164 1064 aa15.86■□□□□ 0.13
CPNE6-210ENST00000558995 ADCY5O95622 1261 aa15.86■□□□□ 0.13
CPNE6-210ENST00000558995 TTC6Q86TZ1 520 aa15.86■□□□□ 0.13
CPNE6-210ENST00000558995 NEK1Q96PY6 1258 aa15.86■□□□□ 0.13
CPNE6-210ENST00000558995 R3HCC1Q9Y3T6 440 aaKnown RBP15.86■□□□□ 0.13
CPNE6-210ENST00000558995 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.86■□□□□ 0.13
CPNE6-210ENST00000558995 COL14A1Q05707 1796 aaKnown RBP15.85■□□□□ 0.13
CPNE6-210ENST00000558995 MCMDC2Q4G0Z9 681 aa15.85■□□□□ 0.13
CPNE6-210ENST00000558995 AFDNP55196 1824 aaKnown RBP15.85■□□□□ 0.13
CPNE6-210ENST00000558995 EXOC5O00471 708 aa15.85■□□□□ 0.13
CPNE6-210ENST00000558995 PIP4K2BP78356 416 aa15.85■□□□□ 0.13
CPNE6-210ENST00000558995 LMBR1LQ6UX01 489 aa15.85■□□□□ 0.13
CPNE6-210ENST00000558995 FERMT3Q86UX7 667 aa15.85■□□□□ 0.13
CPNE6-210ENST00000558995 DNAJC2Q99543 621 aaKnown RBP15.85■□□□□ 0.13
CPNE6-210ENST00000558995 NUTM2BA6NNL0 878 aaPredicted RBP15.84■□□□□ 0.13
CPNE6-210ENST00000558995 NUTM2EB1AL46 878 aaPredicted RBP15.84■□□□□ 0.13
CPNE6-210ENST00000558995 H7C1W4 665 aa15.84■□□□□ 0.13
CPNE6-210ENST00000558995 KIAA2012Q0VF49 1180 aa15.84■□□□□ 0.13
CPNE6-210ENST00000558995 NUTM2AQ8IVF1 878 aaPredicted RBP15.84■□□□□ 0.13
CPNE6-210ENST00000558995 SLC4A9Q96Q91 983 aa15.84■□□□□ 0.13
CPNE6-210ENST00000558995 SCAND2PQ9GZW5 306 aaPredicted RBP15.84■□□□□ 0.13
CPNE6-210ENST00000558995 CWC25Q9NXE8 425 aaPredicted RBP15.84■□□□□ 0.13
CPNE6-210ENST00000558995 CHMP3Q9Y3E7 222 aa15.84■□□□□ 0.13
CPNE6-210ENST00000558995 ZNF609O15014 1411 aa15.84■□□□□ 0.13
CPNE6-210ENST00000558995 FOXO4P98177 505 aa15.83■□□□□ 0.13
CPNE6-210ENST00000558995 KBTBD3Q8NAB2 608 aa15.83■□□□□ 0.13
CPNE6-210ENST00000558995 NDUFB9Q9Y6M9 179 aa15.83■□□□□ 0.13
CPNE6-210ENST00000558995 CCDC192P0DO97 292 aa15.83■□□□□ 0.12
CPNE6-210ENST00000558995 STK3Q13188 491 aa15.83■□□□□ 0.12
CPNE6-210ENST00000558995 TICAM2Q86XR7 235 aa15.83■□□□□ 0.12
CPNE6-210ENST00000558995 GTF3C6Q969F1 213 aa15.83■□□□□ 0.12
CPNE6-210ENST00000558995 FAM173BQ6P4H8 233 aa15.82■□□□□ 0.12
CPNE6-210ENST00000558995 GPR108Q9NPR9 543 aa15.82■□□□□ 0.12
CPNE6-210ENST00000558995 CYP21A2P08686 494 aa15.82■□□□□ 0.12
CPNE6-210ENST00000558995 CCDC129Q6ZRS4 1044 aa15.82■□□□□ 0.12
CPNE6-210ENST00000558995 DDX46Q7L014 1031 aaKnown RBP15.82■□□□□ 0.12
CPNE6-210ENST00000558995 SEC62Q99442 399 aaKnown RBP15.82■□□□□ 0.12
CPNE6-210ENST00000558995 COL22A1Q8NFW1 1626 aaPredicted RBP15.82■□□□□ 0.12
CPNE6-210ENST00000558995 BCL9O00512 1426 aa15.81■□□□□ 0.12
CPNE6-210ENST00000558995 SH3TC1Q8TE82 1336 aa15.81■□□□□ 0.12
CPNE6-210ENST00000558995 A0A0G2JS52 829 aa15.81■□□□□ 0.12
CPNE6-210ENST00000558995 Q6ZUG5 572 aa15.81■□□□□ 0.12
CPNE6-210ENST00000558995 SPATA32Q96LK8 384 aa15.81■□□□□ 0.12
CPNE6-210ENST00000558995 NUP62CLQ9H1M0 184 aa15.81■□□□□ 0.12
CPNE6-210ENST00000558995 CHGBP05060 677 aa15.81■□□□□ 0.12
CPNE6-210ENST00000558995 HMGB1P09429 215 aaKnown RBP15.81■□□□□ 0.12
CPNE6-210ENST00000558995 MAP3K11Q16584 847 aa15.81■□□□□ 0.12
CPNE6-210ENST00000558995 ATG9AQ7Z3C6 839 aa15.81■□□□□ 0.12
CPNE6-210ENST00000558995 CCDC191Q8NCU4 936 aa15.81■□□□□ 0.12
CPNE6-210ENST00000558995 FAM13BQ9NYF5 915 aa15.81■□□□□ 0.12
CPNE6-210ENST00000558995 NUP188Q5SRE5 1749 aa15.8■□□□□ 0.12
CPNE6-210ENST00000558995 GOLGA6L4A6NEF3 574 aa15.8■□□□□ 0.12
CPNE6-210ENST00000558995 LIG1P18858 919 aa15.8■□□□□ 0.12
CPNE6-210ENST00000558995 IRX3P78415 501 aaPredicted RBP15.8■□□□□ 0.12
CPNE6-210ENST00000558995 HELLSQ9NRZ9 838 aa15.8■□□□□ 0.12
CPNE6-210ENST00000558995 PALLDQ8WX93 1383 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms