RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 COL11A2P13942 1736 aaPredicted RBP22.28■■□□□ 1.16
CLPX-203ENST00000558958 METTL24Q5JXM2 366 aa22.28■■□□□ 1.16
CLPX-203ENST00000558958 C16orf71Q8IYS4 520 aaPredicted RBP22.28■■□□□ 1.16
CLPX-203ENST00000558958 BBOX1O75936 387 aa22.27■■□□□ 1.16
CLPX-203ENST00000558958 STYK1Q6J9G0 422 aa22.27■■□□□ 1.16
CLPX-203ENST00000558958 VGLL2Q8N8G2 317 aa22.27■■□□□ 1.16
CLPX-203ENST00000558958 BCL11AQ9H165 835 aa22.27■■□□□ 1.16
CLPX-203ENST00000558958 SPON1Q9HCB6 807 aa22.27■■□□□ 1.16
CLPX-203ENST00000558958 GPR108Q9NPR9 543 aa22.27■■□□□ 1.16
CLPX-203ENST00000558958 SPEF2Q9C093 1822 aa22.27■■□□□ 1.15
CLPX-203ENST00000558958 KIF13BQ9NQT8 1826 aa22.26■■□□□ 1.15
CLPX-203ENST00000558958 ALDH1B1P30837 517 aa22.26■■□□□ 1.15
CLPX-203ENST00000558958 EAF2Q96CJ1 260 aaPredicted RBP22.26■■□□□ 1.15
CLPX-203ENST00000558958 MINPP1Q9UNW1 487 aa22.26■■□□□ 1.15
CLPX-203ENST00000558958 CHRNA5P30532 468 aa22.25■■□□□ 1.15
CLPX-203ENST00000558958 CHRNDQ07001 517 aa22.25■■□□□ 1.15
CLPX-203ENST00000558958 TNNI3KQ59H18 835 aa22.25■■□□□ 1.15
CLPX-203ENST00000558958 OTUD7AQ8TE49 926 aaPredicted RBP22.25■■□□□ 1.15
CLPX-203ENST00000558958 FPGT-TNNI3KV9GXZ4 949 aa22.25■■□□□ 1.15
CLPX-203ENST00000558958 PDE8BO95263 885 aa22.24■■□□□ 1.15
CLPX-203ENST00000558958 RGS3P49796 1198 aa22.24■■□□□ 1.15
CLPX-203ENST00000558958 AACSQ86V21 672 aa22.24■■□□□ 1.15
CLPX-203ENST00000558958 ZNF622Q969S3 477 aaKnown RBP eCLIP22.24■■□□□ 1.15
CLPX-203ENST00000558958 SALL3Q9BXA9 1300 aa22.23■■□□□ 1.15
CLPX-203ENST00000558958 TMC4Q7Z404 712 aa22.23■■□□□ 1.15
CLPX-203ENST00000558958 HELBQ8NG08 1087 aaPredicted RBP22.23■■□□□ 1.15
CLPX-203ENST00000558958 AKAP2Q9Y2D5 859 aa22.23■■□□□ 1.15
CLPX-203ENST00000558958 TGFB2P61812 414 aa22.22■■□□□ 1.15
CLPX-203ENST00000558958 PLEKHM2Q8IWE5 1019 aa22.22■■□□□ 1.15
CLPX-203ENST00000558958 IFIT2P09913 472 aaKnown RBP22.22■■□□□ 1.15
CLPX-203ENST00000558958 CNKSR1Q969H4 720 aa22.22■■□□□ 1.15
CLPX-203ENST00000558958 CD2APQ9Y5K6 639 aa22.22■■□□□ 1.15
CLPX-203ENST00000558958 ZNF609O15014 1411 aa22.21■■□□□ 1.15
CLPX-203ENST00000558958 PPEF1O14829 653 aaPredicted RBP22.21■■□□□ 1.15
CLPX-203ENST00000558958 TAF5LO75529 589 aa22.21■■□□□ 1.15
CLPX-203ENST00000558958 DPEP1P16444 411 aa22.21■■□□□ 1.15
CLPX-203ENST00000558958 TIMM10P62072 90 aa22.21■■□□□ 1.15
CLPX-203ENST00000558958 ANKRD2Q9GZV1 360 aa22.21■■□□□ 1.15
CLPX-203ENST00000558958 CCDC8Q9H0W5 538 aaPredicted RBP22.21■■□□□ 1.15
CLPX-203ENST00000558958 A0A0G2JLW4 131 aa22.2■■□□□ 1.14
CLPX-203ENST00000558958 A0A1B0GUL7 405 aa22.2■■□□□ 1.14
CLPX-203ENST00000558958 MX1P20591 662 aa22.2■■□□□ 1.14
CLPX-203ENST00000558958 FGFR2P21802 821 aa22.2■■□□□ 1.14
CLPX-203ENST00000558958 KCNA3P22001 575 aa22.2■■□□□ 1.14
CLPX-203ENST00000558958 PUM3Q15397 648 aaKnown RBP22.2■■□□□ 1.14
CLPX-203ENST00000558958 ATP2B3Q16720 1220 aa22.2■■□□□ 1.14
CLPX-203ENST00000558958 SLC51AQ86UW1 340 aa22.2■■□□□ 1.14
CLPX-203ENST00000558958 STAP2Q9UGK3 403 aa22.2■■□□□ 1.14
CLPX-203ENST00000558958 PDE1AP54750 535 aa22.19■■□□□ 1.14
CLPX-203ENST00000558958 SP8Q8IXZ3 490 aa22.19■■□□□ 1.14
CLPX-203ENST00000558958 TLR7Q9NYK1 1049 aaKnown RBP22.19■■□□□ 1.14
CLPX-203ENST00000558958 DBNLQ9UJU6 430 aaKnown RBP22.19■■□□□ 1.14
CLPX-203ENST00000558958 ATP6V0A2Q9Y487 856 aa22.19■■□□□ 1.14
CLPX-203ENST00000558958 DLEC1Q9Y238 1755 aa22.19■■□□□ 1.14
CLPX-203ENST00000558958 PRPF40BQ6NWY9 871 aaKnown RBP22.18■■□□□ 1.14
CLPX-203ENST00000558958 LPIN2Q92539 896 aa22.18■■□□□ 1.14
CLPX-203ENST00000558958 NEUROD6Q96NK8 337 aa22.18■■□□□ 1.14
CLPX-203ENST00000558958 OSBPL3Q9H4L5 887 aa22.18■■□□□ 1.14
CLPX-203ENST00000558958 PPP1R1BQ9UD71 204 aaPredicted RBP22.18■■□□□ 1.14
CLPX-203ENST00000558958 KIAA1551Q9HCM1 1747 aa22.18■■□□□ 1.14
CLPX-203ENST00000558958 A0A1B0GUL6 1792 aa22.17■■□□□ 1.14
CLPX-203ENST00000558958 SNAP23O00161 211 aa22.17■■□□□ 1.14
CLPX-203ENST00000558958 DBNDD2Q9BQY9 259 aa22.17■■□□□ 1.14
CLPX-203ENST00000558958 UBE4AQ14139 1066 aa22.16■■□□□ 1.14
CLPX-203ENST00000558958 XAGE2Q96GT9 111 aa22.16■■□□□ 1.14
CLPX-203ENST00000558958 ANKIB1Q9P2G1 1089 aa22.16■■□□□ 1.14
CLPX-203ENST00000558958 XDHP47989 1333 aa22.16■■□□□ 1.14
CLPX-203ENST00000558958 TTC41PQ6P2S7 1318 aa22.16■■□□□ 1.14
CLPX-203ENST00000558958 LRRC37AA6NMS7 1700 aa22.16■■□□□ 1.14
CLPX-203ENST00000558958 SLC5A1P13866 664 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 GPSM2P81274 684 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 KLHL34Q8N239 644 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 TTLL6Q8N841 843 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 GPATCH3Q96I76 525 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 ECHDC1Q9NTX5 307 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 SLX4Q8IY92 1834 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 AOX1Q06278 1338 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 WTIPA6NIX2 430 aaPredicted RBP22.15■■□□□ 1.14
CLPX-203ENST00000558958 IFIT1P09914 478 aaKnown RBP22.15■■□□□ 1.14
CLPX-203ENST00000558958 ADORA1P30542 326 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 TSHZ3Q63HK5 1081 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 C7orf43Q8WVR3 580 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 PODXL2Q9NZ53 605 aa22.15■■□□□ 1.14
CLPX-203ENST00000558958 PIM2Q9P1W9 311 aa22.14■■□□□ 1.13
CLPX-203ENST00000558958 NSFL1CQ9UNZ2 370 aaKnown RBP22.14■■□□□ 1.13
CLPX-203ENST00000558958 LEMD3Q9Y2U8 911 aa22.14■■□□□ 1.13
CLPX-203ENST00000558958 ZNF804BA4D1E1 1349 aa22.13■■□□□ 1.13
CLPX-203ENST00000558958 OLFM4Q6UX06 510 aa22.13■■□□□ 1.13
CLPX-203ENST00000558958 PI4K2BQ8TCG2 481 aa22.13■■□□□ 1.13
CLPX-203ENST00000558958 TMX4Q9H1E5 349 aaPredicted RBP22.13■■□□□ 1.13
CLPX-203ENST00000558958 KCNJ4P48050 445 aa22.12■■□□□ 1.13
CLPX-203ENST00000558958 CACNA1SQ13698 1873 aa22.12■■□□□ 1.13
CLPX-203ENST00000558958 ARAP2Q8WZ64 1704 aa22.11■■□□□ 1.13
CLPX-203ENST00000558958 ERC2O15083 957 aa22.11■■□□□ 1.13
CLPX-203ENST00000558958 ATP2B4P23634 1241 aa22.11■■□□□ 1.13
CLPX-203ENST00000558958 GORABQ5T7V8 394 aa22.11■■□□□ 1.13
CLPX-203ENST00000558958 TTC22Q5TAA0 569 aa22.11■■□□□ 1.13
CLPX-203ENST00000558958 GGA1Q9UJY5 639 aa22.11■■□□□ 1.13
CLPX-203ENST00000558958 GLRX3O76003 335 aaKnown RBP22.1■■□□□ 1.13
CLPX-203ENST00000558958 ATP5JP18859 108 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms