RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 DCAF8Q5TAQ9 597 aa27.28■■□□□ 1.96
CRNDE-205ENST00000558952 USP50Q70EL3 339 aaPredicted RBP27.28■■□□□ 1.96
CRNDE-205ENST00000558952 GPRC5DQ9NZD1 345 aa27.28■■□□□ 1.96
CRNDE-205ENST00000558952 YDJCA8MPS7 323 aa27.27■■□□□ 1.96
CRNDE-205ENST00000558952 IGHMBP2P38935 993 aaKnown RBP27.27■■□□□ 1.96
CRNDE-205ENST00000558952 GMPSP49915 693 aaPredicted RBP27.27■■□□□ 1.96
CRNDE-205ENST00000558952 CASP7P55210 303 aa27.27■■□□□ 1.96
CRNDE-205ENST00000558952 GPR101Q96P66 508 aaPredicted RBP27.27■■□□□ 1.96
CRNDE-205ENST00000558952 ADAMTSL1Q8N6G6 1762 aa27.27■■□□□ 1.96
CRNDE-205ENST00000558952 ECE2O60344 883 aa27.26■■□□□ 1.95
CRNDE-205ENST00000558952 DOK7Q18PE1 504 aa27.26■■□□□ 1.95
CRNDE-205ENST00000558952 SLC4A10Q6U841 1118 aa27.26■■□□□ 1.95
CRNDE-205ENST00000558952 ADARB2Q9NS39 739 aaKnown RBP27.26■■□□□ 1.95
CRNDE-205ENST00000558952 BSDC1Q9NW68 430 aaPredicted RBP27.26■■□□□ 1.95
CRNDE-205ENST00000558952 MAP1SQ66K74 1059 aaPredicted RBP27.25■■□□□ 1.95
CRNDE-205ENST00000558952 PASKQ96RG2 1323 aa27.24■■□□□ 1.95
CRNDE-205ENST00000558952 ITGA6P23229 1130 aa27.24■■□□□ 1.95
CRNDE-205ENST00000558952 ATP2B4P23634 1241 aa27.24■■□□□ 1.95
CRNDE-205ENST00000558952 CNTROBQ8N137 903 aa27.24■■□□□ 1.95
CRNDE-205ENST00000558952 CREBZFQ9NS37 354 aa27.24■■□□□ 1.95
CRNDE-205ENST00000558952 ITGBL1O95965 494 aaPredicted RBP27.23■■□□□ 1.95
CRNDE-205ENST00000558952 FAM161AQ3B820 660 aa27.23■■□□□ 1.95
CRNDE-205ENST00000558952 SRCIN1Q9C0H9 1055 aa27.23■■□□□ 1.95
CRNDE-205ENST00000558952 C9orf78Q9NZ63 289 aaPredicted RBP27.23■■□□□ 1.95
CRNDE-205ENST00000558952 ALDH1L1O75891 902 aa27.22■■□□□ 1.95
CRNDE-205ENST00000558952 CSF1RP07333 972 aa27.22■■□□□ 1.95
CRNDE-205ENST00000558952 MRPL50Q8N5N7 158 aaKnown RBP27.22■■□□□ 1.95
CRNDE-205ENST00000558952 CDCA7LQ96GN5 454 aa27.22■■□□□ 1.95
CRNDE-205ENST00000558952 MPHOSPH8Q99549 860 aa27.22■■□□□ 1.95
CRNDE-205ENST00000558952 MINPP1Q9UNW1 487 aa27.22■■□□□ 1.95
CRNDE-205ENST00000558952 GRM8O00222 908 aa27.21■■□□□ 1.95
CRNDE-205ENST00000558952 PSMD14O00487 310 aa27.21■■□□□ 1.95
CRNDE-205ENST00000558952 CHMP3Q9Y3E7 222 aa27.21■■□□□ 1.95
CRNDE-205ENST00000558952 ANKRD18BA2A2Z9 1011 aa27.2■■□□□ 1.94
CRNDE-205ENST00000558952 H7C1D1 291 aa27.2■■□□□ 1.94
CRNDE-205ENST00000558952 CNOT7Q9UIV1 285 aaKnown RBP27.2■■□□□ 1.94
CRNDE-205ENST00000558952 PTPRCP08575 1304 aa27.19■■□□□ 1.94
CRNDE-205ENST00000558952 SPEF2Q9C093 1822 aa27.19■■□□□ 1.94
CRNDE-205ENST00000558952 ZBTB12Q9Y330 459 aaPredicted RBP27.19■■□□□ 1.94
CRNDE-205ENST00000558952 TMEM88BA6NKF7 163 aa27.18■■□□□ 1.94
CRNDE-205ENST00000558952 RPS12P25398 132 aaKnown RBP27.18■■□□□ 1.94
CRNDE-205ENST00000558952 IFIT5Q13325 482 aaKnown RBP27.18■■□□□ 1.94
CRNDE-205ENST00000558952 DIEXFQ68CQ4 756 aaKnown RBP27.18■■□□□ 1.94
CRNDE-205ENST00000558952 SSH1Q8WYL5 1049 aa27.18■■□□□ 1.94
CRNDE-205ENST00000558952 DPF2Q92785 391 aa27.18■■□□□ 1.94
CRNDE-205ENST00000558952 ANKRD2Q9GZV1 360 aa27.18■■□□□ 1.94
CRNDE-205ENST00000558952 CCT4P50991 539 aaKnown RBP27.17■■□□□ 1.94
CRNDE-205ENST00000558952 FOXO4P98177 505 aa27.17■■□□□ 1.94
CRNDE-205ENST00000558952 ALDH1L2Q3SY69 923 aa27.17■■□□□ 1.94
CRNDE-205ENST00000558952 MICALL2Q8IY33 904 aa27.17■■□□□ 1.94
CRNDE-205ENST00000558952 JMYQ8N9B5 988 aa27.17■■□□□ 1.94
CRNDE-205ENST00000558952 KCNQ5Q9NR82 932 aa27.16■■□□□ 1.94
CRNDE-205ENST00000558952 MED23Q9ULK4 1368 aa27.16■■□□□ 1.94
CRNDE-205ENST00000558952 LMBR1LQ6UX01 489 aa27.15■■□□□ 1.94
CRNDE-205ENST00000558952 TRMT2AQ8IZ69 625 aaKnown RBP27.15■■□□□ 1.94
CRNDE-205ENST00000558952 SMC4Q9NTJ3 1288 aa27.15■■□□□ 1.94
CRNDE-205ENST00000558952 LEMD3Q9Y2U8 911 aa27.15■■□□□ 1.94
CRNDE-205ENST00000558952 CT47B1P0C2W7 299 aaPredicted RBP27.14■■□□□ 1.94
CRNDE-205ENST00000558952 CCDC57Q2TAC2 916 aa27.14■■□□□ 1.94
CRNDE-205ENST00000558952 PODNQ7Z5L7 613 aa27.14■■□□□ 1.94
CRNDE-205ENST00000558952 MKRN1Q9UHC7 482 aaKnown RBP27.14■■□□□ 1.94
CRNDE-205ENST00000558952 KCNJ4P48050 445 aa27.13■■□□□ 1.93
CRNDE-205ENST00000558952 TAF7LQ5H9L4 462 aa27.13■■□□□ 1.93
CRNDE-205ENST00000558952 ZC3H15Q8WU90 426 aaKnown RBP27.13■■□□□ 1.93
CRNDE-205ENST00000558952 VIL1P09327 827 aaKnown RBP27.12■■□□□ 1.93
CRNDE-205ENST00000558952 TRPM4Q8TD43 1214 aa27.12■■□□□ 1.93
CRNDE-205ENST00000558952 ZNF804BA4D1E1 1349 aa27.12■■□□□ 1.93
CRNDE-205ENST00000558952 SHTN1A0MZ66 631 aa27.11■■□□□ 1.93
CRNDE-205ENST00000558952 CHRNDQ07001 517 aa27.11■■□□□ 1.93
CRNDE-205ENST00000558952 EPHA10Q5JZY3 1008 aa27.11■■□□□ 1.93
CRNDE-205ENST00000558952 WTIPA6NIX2 430 aaPredicted RBP27.1■■□□□ 1.93
CRNDE-205ENST00000558952 HIRAP54198 1017 aaPredicted RBP27.1■■□□□ 1.93
CRNDE-205ENST00000558952 MIER1Q8N108 512 aa27.1■■□□□ 1.93
CRNDE-205ENST00000558952 USP17L3A6NCW0 530 aa27.09■■□□□ 1.93
CRNDE-205ENST00000558952 USP17L4A6NCW7 530 aa27.09■■□□□ 1.93
CRNDE-205ENST00000558952 NBPF7P0C2Y1 421 aaPredicted RBP27.09■■□□□ 1.93
CRNDE-205ENST00000558952 TBC1D10BQ4KMP7 808 aaPredicted RBP27.09■■□□□ 1.93
CRNDE-205ENST00000558952 RSBN1LQ6PCB5 846 aaPredicted RBP27.09■■□□□ 1.93
CRNDE-205ENST00000558952 USP17L1Q7RTZ2 530 aa27.09■■□□□ 1.93
CRNDE-205ENST00000558952 SAMD7Q7Z3H4 446 aa27.09■■□□□ 1.93
CRNDE-205ENST00000558952 SUCLG2Q96I99 432 aa27.09■■□□□ 1.93
CRNDE-205ENST00000558952 PGAP2Q9UHJ9 254 aa27.09■■□□□ 1.93
CRNDE-205ENST00000558952 CNTNAP1P78357 1384 aa27.09■■□□□ 1.93
CRNDE-205ENST00000558952 AGBL3Q8NEM8 1001 aa27.08■■□□□ 1.93
CRNDE-205ENST00000558952 COA1Q9GZY4 146 aa27.08■■□□□ 1.93
CRNDE-205ENST00000558952 ABT1Q9ULW3 272 aaKnown RBP27.08■■□□□ 1.93
CRNDE-205ENST00000558952 UTYO14607 1347 aa27.08■■□□□ 1.93
CRNDE-205ENST00000558952 TRAF5O00463 557 aa27.07■■□□□ 1.92
CRNDE-205ENST00000558952 RBM26Q5T8P6 1007 aaKnown RBP27.07■■□□□ 1.92
CRNDE-205ENST00000558952 LDHAL6AQ6ZMR3 332 aa27.07■■□□□ 1.92
CRNDE-205ENST00000558952 CNNM1Q9NRU3 951 aa27.07■■□□□ 1.92
CRNDE-205ENST00000558952 SCN9AQ15858 1988 aa27.07■■□□□ 1.92
CRNDE-205ENST00000558952 CDC37L1Q7L3B6 337 aa27.06■■□□□ 1.92
CRNDE-205ENST00000558952 FBXW7Q969H0 707 aa27.06■■□□□ 1.92
CRNDE-205ENST00000558952 GLIS2Q9BZE0 524 aaPredicted RBP27.06■■□□□ 1.92
CRNDE-205ENST00000558952 ZNF609O15014 1411 aa27.06■■□□□ 1.92
CRNDE-205ENST00000558952 FMR1Q06787 632 aaKnown RBP eCLIP27.05■■□□□ 1.92
CRNDE-205ENST00000558952 KIF4BQ2VIQ3 1234 aa27.05■■□□□ 1.92
CRNDE-205ENST00000558952 ZNF594Q96JF6 807 aaPredicted RBP27.05■■□□□ 1.92
CRNDE-205ENST00000558952 TAF5LO75529 589 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms