RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ECE2O60344 883 aa17.46■□□□□ 0.39
VPS18-203ENST00000558855 IL16Q14005 1332 aa17.46■□□□□ 0.38
VPS18-203ENST00000558855 NEURL1BA8MQ27 555 aa17.45■□□□□ 0.38
VPS18-203ENST00000558855 MICALL2Q8IY33 904 aa17.45■□□□□ 0.38
VPS18-203ENST00000558855 CNOT7Q9UIV1 285 aaKnown RBP17.45■□□□□ 0.38
VPS18-203ENST00000558855 UFL1O94874 794 aa17.44■□□□□ 0.38
VPS18-203ENST00000558855 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
VPS18-203ENST00000558855 CTSWP56202 376 aa17.44■□□□□ 0.38
VPS18-203ENST00000558855 DEFB115Q30KQ5 88 aa17.44■□□□□ 0.38
VPS18-203ENST00000558855 SAMD7Q7Z3H4 446 aa17.44■□□□□ 0.38
VPS18-203ENST00000558855 TTLL11Q8NHH1 800 aa17.44■□□□□ 0.38
VPS18-203ENST00000558855 BCL2L13Q9BXK5 485 aa17.44■□□□□ 0.38
VPS18-203ENST00000558855 PODXL2Q9NZ53 605 aa17.44■□□□□ 0.38
VPS18-203ENST00000558855 PGAP2Q9UHJ9 254 aa17.44■□□□□ 0.38
VPS18-203ENST00000558855 ABT1Q9ULW3 272 aaKnown RBP17.44■□□□□ 0.38
VPS18-203ENST00000558855 VAMP4O75379 141 aa17.43■□□□□ 0.38
VPS18-203ENST00000558855 DDX58O95786 925 aaKnown RBP17.43■□□□□ 0.38
VPS18-203ENST00000558855 CASP7P55210 303 aa17.43■□□□□ 0.38
VPS18-203ENST00000558855 EXOSC9Q06265 439 aaKnown RBP17.43■□□□□ 0.38
VPS18-203ENST00000558855 TNIP1Q15025 636 aa17.43■□□□□ 0.38
VPS18-203ENST00000558855 CCDC152Q4G0S7 254 aa17.43■□□□□ 0.38
VPS18-203ENST00000558855 CYP4F22Q6NT55 531 aa17.43■□□□□ 0.38
VPS18-203ENST00000558855 GREM2Q9H772 168 aa17.43■□□□□ 0.38
VPS18-203ENST00000558855 ASTN2O75129 1339 aaPredicted RBP17.43■□□□□ 0.38
VPS18-203ENST00000558855 ANP32CO43423 234 aa17.42■□□□□ 0.38
VPS18-203ENST00000558855 ZEB1P37275 1124 aaPredicted RBP17.42■□□□□ 0.38
VPS18-203ENST00000558855 FLIIQ13045 1269 aa17.42■□□□□ 0.38
VPS18-203ENST00000558855 TBC1D10BQ4KMP7 808 aaPredicted RBP17.42■□□□□ 0.38
VPS18-203ENST00000558855 UBE3BQ7Z3V4 1068 aa17.42■□□□□ 0.38
VPS18-203ENST00000558855 TNS4Q8IZW8 715 aa17.42■□□□□ 0.38
VPS18-203ENST00000558855 STK31Q9BXU1 1019 aa17.42■□□□□ 0.38
VPS18-203ENST00000558855 WDR33Q9C0J8 1336 aaKnown RBP17.42■□□□□ 0.38
VPS18-203ENST00000558855 H7C1W4 665 aa17.41■□□□□ 0.38
VPS18-203ENST00000558855 WBP1LQ9NX94 342 aa17.41■□□□□ 0.38
VPS18-203ENST00000558855 TLL2Q9Y6L7 1015 aa17.41■□□□□ 0.38
VPS18-203ENST00000558855 CAPN15O75808 1086 aa17.4■□□□□ 0.38
VPS18-203ENST00000558855 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
VPS18-203ENST00000558855 ANKIB1Q9P2G1 1089 aa17.4■□□□□ 0.38
VPS18-203ENST00000558855 GGA1Q9UJY5 639 aa17.4■□□□□ 0.38
VPS18-203ENST00000558855 F6X3S4 739 aa17.39■□□□□ 0.37
VPS18-203ENST00000558855 AOC2O75106 756 aa17.39■□□□□ 0.37
VPS18-203ENST00000558855 CELF2O95319 508 aaKnown RBP17.39■□□□□ 0.37
VPS18-203ENST00000558855 GRM1Q13255 1194 aa17.39■□□□□ 0.37
VPS18-203ENST00000558855 GCKRQ14397 625 aa17.39■□□□□ 0.37
VPS18-203ENST00000558855 ANKRD18AQ8IVF6 992 aa17.39■□□□□ 0.37
VPS18-203ENST00000558855 DPF2Q92785 391 aa17.39■□□□□ 0.37
VPS18-203ENST00000558855 CAPNS2Q96L46 248 aa17.39■□□□□ 0.37
VPS18-203ENST00000558855 EYA3Q99504 573 aa17.39■□□□□ 0.37
VPS18-203ENST00000558855 ADM5C9JUS6 153 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 VIL1P09327 827 aaKnown RBP17.38■□□□□ 0.37
VPS18-203ENST00000558855 KLRK1P26718 216 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 FAM161AQ3B820 660 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 SAPCD2Q86UD0 394 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 USP48Q86UV5 1035 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 TXNRD3Q86VQ6 643 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 WDR63Q8IWG1 891 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 FAM9BQ8IZU0 186 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 ZC3H12CQ9C0D7 883 aaKnown RBP17.38■□□□□ 0.37
VPS18-203ENST00000558855 ZNF408Q9H9D4 720 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 MINPP1Q9UNW1 487 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 XDHP47989 1333 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 ZNF609O15014 1411 aa17.38■□□□□ 0.37
VPS18-203ENST00000558855 HSPA8P11142 646 aaKnown RBP17.37■□□□□ 0.37
VPS18-203ENST00000558855 FKBP5Q13451 457 aaPredicted RBP17.37■□□□□ 0.37
VPS18-203ENST00000558855 RBM26Q5T8P6 1007 aaKnown RBP17.37■□□□□ 0.37
VPS18-203ENST00000558855 DNAAF4Q8WXU2 420 aa17.37■□□□□ 0.37
VPS18-203ENST00000558855 MXD3Q9BW11 206 aa17.37■□□□□ 0.37
VPS18-203ENST00000558855 H7C1D1 291 aa17.36■□□□□ 0.37
VPS18-203ENST00000558855 LBX1P52954 281 aa17.36■□□□□ 0.37
VPS18-203ENST00000558855 NEXNQ0ZGT2 675 aa17.36■□□□□ 0.37
VPS18-203ENST00000558855 ZC3H15Q8WU90 426 aaKnown RBP17.36■□□□□ 0.37
VPS18-203ENST00000558855 ZIC5Q96T25 663 aa17.36■□□□□ 0.37
VPS18-203ENST00000558855 GMLQ99445 158 aa17.36■□□□□ 0.37
VPS18-203ENST00000558855 ZNF521Q96K83 1311 aa17.36■□□□□ 0.37
VPS18-203ENST00000558855 SNAP23O00161 211 aa17.35■□□□□ 0.37
VPS18-203ENST00000558855 KIF4BQ2VIQ3 1234 aa17.35■□□□□ 0.37
VPS18-203ENST00000558855 PAXIP1Q6ZW49 1069 aaPredicted RBP17.35■□□□□ 0.37
VPS18-203ENST00000558855 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
VPS18-203ENST00000558855 BSDC1Q9NW68 430 aaPredicted RBP17.35■□□□□ 0.37
VPS18-203ENST00000558855 SCAF8Q9UPN6 1271 aaKnown RBP17.35■□□□□ 0.37
VPS18-203ENST00000558855 MED23Q9ULK4 1368 aa17.35■□□□□ 0.37
VPS18-203ENST00000558855 CSF1RP07333 972 aa17.34■□□□□ 0.37
VPS18-203ENST00000558855 HSP90B1P14625 803 aaKnown RBP17.34■□□□□ 0.37
VPS18-203ENST00000558855 RPS12P25398 132 aaKnown RBP17.34■□□□□ 0.37
VPS18-203ENST00000558855 EPHA10Q5JZY3 1008 aa17.34■□□□□ 0.37
VPS18-203ENST00000558855 CDC37L1Q7L3B6 337 aa17.34■□□□□ 0.37
VPS18-203ENST00000558855 LINS1Q8NG48 757 aa17.34■□□□□ 0.37
VPS18-203ENST00000558855 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
VPS18-203ENST00000558855 GGA3Q9NZ52 723 aa17.34■□□□□ 0.37
VPS18-203ENST00000558855 TSKSQ9UJT2 592 aa17.34■□□□□ 0.37
VPS18-203ENST00000558855 IRS2Q9Y4H2 1338 aa17.33■□□□□ 0.36
VPS18-203ENST00000558855 ITGA6P23229 1130 aa17.33■□□□□ 0.36
VPS18-203ENST00000558855 ATP2B4P23634 1241 aa17.33■□□□□ 0.36
VPS18-203ENST00000558855 CTCFP49711 727 aaPredicted RBP17.33■□□□□ 0.36
VPS18-203ENST00000558855 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
VPS18-203ENST00000558855 FOXO4P98177 505 aa17.33■□□□□ 0.36
VPS18-203ENST00000558855 BEND3Q5T5X7 828 aa17.33■□□□□ 0.36
VPS18-203ENST00000558855 RSBN1LQ6PCB5 846 aaPredicted RBP17.33■□□□□ 0.36
VPS18-203ENST00000558855 CHMP4AQ9BY43 222 aa17.33■□□□□ 0.36
VPS18-203ENST00000558855 CASP8AP2Q9UKL3 1982 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms