RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 GTF2E1P29083 439 aaPredicted RBP13.79□□□□□ -0.2
HMG20A-206ENST00000558845 RGS3P49796 1198 aa13.79□□□□□ -0.2
HMG20A-206ENST00000558845 DDR1Q08345 913 aa13.79□□□□□ -0.2
HMG20A-206ENST00000558845 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
HMG20A-206ENST00000558845 PRR5LQ6MZQ0 368 aa13.79□□□□□ -0.2
HMG20A-206ENST00000558845 ATG9AQ7Z3C6 839 aa13.79□□□□□ -0.2
HMG20A-206ENST00000558845 CNBD1Q8NA66 436 aa13.79□□□□□ -0.2
HMG20A-206ENST00000558845 SLC16A10Q8TF71 515 aa13.79□□□□□ -0.2
HMG20A-206ENST00000558845 NLRP3Q96P20 1036 aa13.79□□□□□ -0.2
HMG20A-206ENST00000558845 CHMP3Q9Y3E7 222 aa13.79□□□□□ -0.2
HMG20A-206ENST00000558845 KLRG2A4D1S0 409 aaPredicted RBP13.78□□□□□ -0.2
HMG20A-206ENST00000558845 FAM177BA6PVY3 158 aa13.78□□□□□ -0.2
HMG20A-206ENST00000558845 SMARCA5O60264 1052 aaPredicted RBP13.78□□□□□ -0.2
HMG20A-206ENST00000558845 BMP2KLQ5H9B9 411 aa13.78□□□□□ -0.2
HMG20A-206ENST00000558845 SKAP1Q86WV1 359 aa13.78□□□□□ -0.2
HMG20A-206ENST00000558845 KLHDC4Q8TBB5 520 aa13.78□□□□□ -0.2
HMG20A-206ENST00000558845 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
HMG20A-206ENST00000558845 PDE1AP54750 535 aa13.77□□□□□ -0.21
HMG20A-206ENST00000558845 ST5P78524 1137 aa13.77□□□□□ -0.21
HMG20A-206ENST00000558845 CRY2Q49AN0 593 aa13.77□□□□□ -0.21
HMG20A-206ENST00000558845 CDC5LQ99459 802 aaKnown RBP13.77□□□□□ -0.21
HMG20A-206ENST00000558845 PODXL2Q9NZ53 605 aa13.77□□□□□ -0.21
HMG20A-206ENST00000558845 RIPOR2Q9Y4F9 1068 aa13.77□□□□□ -0.21
HMG20A-206ENST00000558845 CASZ1Q86V15 1759 aa13.76□□□□□ -0.21
HMG20A-206ENST00000558845 TTC41PQ6P2S7 1318 aa13.76□□□□□ -0.21
HMG20A-206ENST00000558845 APBB1O00213 710 aa13.76□□□□□ -0.21
HMG20A-206ENST00000558845 MX1P20591 662 aa13.76□□□□□ -0.21
HMG20A-206ENST00000558845 TAF7LQ5H9L4 462 aa13.76□□□□□ -0.21
HMG20A-206ENST00000558845 ASTLQ6HA08 431 aaPredicted RBP13.76□□□□□ -0.21
HMG20A-206ENST00000558845 SIL1Q9H173 461 aa13.76□□□□□ -0.21
HMG20A-206ENST00000558845 IL1RAPL2Q9NP60 686 aa13.76□□□□□ -0.21
HMG20A-206ENST00000558845 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
HMG20A-206ENST00000558845 MROH5Q6ZUA9 1318 aa13.75□□□□□ -0.21
HMG20A-206ENST00000558845 LRRC24Q50LG9 513 aa13.75□□□□□ -0.21
HMG20A-206ENST00000558845 TNNI3KQ59H18 835 aa13.75□□□□□ -0.21
HMG20A-206ENST00000558845 LDHAL6AQ6ZMR3 332 aa13.75□□□□□ -0.21
HMG20A-206ENST00000558845 C3orf67Q6ZVT6 689 aa13.75□□□□□ -0.21
HMG20A-206ENST00000558845 C16orf71Q8IYS4 520 aaPredicted RBP13.75□□□□□ -0.21
HMG20A-206ENST00000558845 ZNF594Q96JF6 807 aaPredicted RBP13.75□□□□□ -0.21
HMG20A-206ENST00000558845 FPGT-TNNI3KV9GXZ4 949 aa13.75□□□□□ -0.21
HMG20A-206ENST00000558845 ZNF609O15014 1411 aa13.74□□□□□ -0.21
HMG20A-206ENST00000558845 IGHMBP2P38935 993 aaKnown RBP13.74□□□□□ -0.21
HMG20A-206ENST00000558845 TFCP2Q12800 502 aa13.74□□□□□ -0.21
HMG20A-206ENST00000558845 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
HMG20A-206ENST00000558845 ILDR2Q71H61 639 aa13.74□□□□□ -0.21
HMG20A-206ENST00000558845 VGLL2Q8N8G2 317 aa13.74□□□□□ -0.21
HMG20A-206ENST00000558845 OTUD7AQ8TE49 926 aaPredicted RBP13.74□□□□□ -0.21
HMG20A-206ENST00000558845 EAF2Q96CJ1 260 aaPredicted RBP13.74□□□□□ -0.21
HMG20A-206ENST00000558845 MS4A3Q96HJ5 214 aa13.74□□□□□ -0.21
HMG20A-206ENST00000558845 BRIP1Q9BX63 1249 aa13.74□□□□□ -0.21
HMG20A-206ENST00000558845 PUS3Q9BZE2 481 aaKnown RBP13.74□□□□□ -0.21
HMG20A-206ENST00000558845 BSDC1Q9NW68 430 aaPredicted RBP13.74□□□□□ -0.21
HMG20A-206ENST00000558845 CEP126Q9P2H0 1117 aa13.74□□□□□ -0.21
HMG20A-206ENST00000558845 AKAP2Q9Y2D5 859 aa13.74□□□□□ -0.21
HMG20A-206ENST00000558845 PARP3Q9Y6F1 533 aa13.74□□□□□ -0.21
HMG20A-206ENST00000558845 NPHP1O15259 732 aa13.73□□□□□ -0.21
HMG20A-206ENST00000558845 MMP10P09238 476 aa13.73□□□□□ -0.21
HMG20A-206ENST00000558845 IFIT2P09913 472 aaKnown RBP13.73□□□□□ -0.21
HMG20A-206ENST00000558845 HOXA10P31260 410 aaPredicted RBP13.73□□□□□ -0.21
HMG20A-206ENST00000558845 AACSQ86V21 672 aa13.73□□□□□ -0.21
HMG20A-206ENST00000558845 ANKRD18AQ8IVF6 992 aa13.73□□□□□ -0.21
HMG20A-206ENST00000558845 GPATCH3Q96I76 525 aa13.73□□□□□ -0.21
HMG20A-206ENST00000558845 CCDC85AQ96PX6 553 aaPredicted RBP13.73□□□□□ -0.21
HMG20A-206ENST00000558845 MPHOSPH8Q99549 860 aa13.73□□□□□ -0.21
HMG20A-206ENST00000558845 SEC31BQ9NQW1 1179 aa13.73□□□□□ -0.21
HMG20A-206ENST00000558845 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.73□□□□□ -0.21
HMG20A-206ENST00000558845 ERC2O15083 957 aa13.72□□□□□ -0.21
HMG20A-206ENST00000558845 GLRX3O76003 335 aaKnown RBP13.72□□□□□ -0.21
HMG20A-206ENST00000558845 DDX46Q7L014 1031 aaKnown RBP13.72□□□□□ -0.21
HMG20A-206ENST00000558845 PI4K2BQ8TCG2 481 aa13.72□□□□□ -0.21
HMG20A-206ENST00000558845 CNNM1Q9NRU3 951 aa13.72□□□□□ -0.21
HMG20A-206ENST00000558845 ECHDC1Q9NTX5 307 aa13.72□□□□□ -0.21
HMG20A-206ENST00000558845 PDE8BO95263 885 aa13.71□□□□□ -0.21
HMG20A-206ENST00000558845 GSPT1P15170 499 aaKnown RBP13.71□□□□□ -0.21
HMG20A-206ENST00000558845 RPS8P62241 208 aaKnown RBP13.71□□□□□ -0.21
HMG20A-206ENST00000558845 GRAPQ13588 217 aa13.71□□□□□ -0.21
HMG20A-206ENST00000558845 C8orf34Q49A92 452 aa13.71□□□□□ -0.21
HMG20A-206ENST00000558845 GRAPLQ8TC17 118 aaPredicted RBP13.71□□□□□ -0.21
HMG20A-206ENST00000558845 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
HMG20A-206ENST00000558845 DBNLQ9UJU6 430 aaKnown RBP13.71□□□□□ -0.21
HMG20A-206ENST00000558845 ANKRD31Q8N7Z5 1873 aa13.71□□□□□ -0.21
HMG20A-206ENST00000558845 FGFR2P21802 821 aa13.7□□□□□ -0.22
HMG20A-206ENST00000558845 PDE6BP35913 854 aa13.7□□□□□ -0.22
HMG20A-206ENST00000558845 METTL24Q5JXM2 366 aa13.7□□□□□ -0.22
HMG20A-206ENST00000558845 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
HMG20A-206ENST00000558845 TICAM2Q86XR7 235 aa13.7□□□□□ -0.22
HMG20A-206ENST00000558845 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.7□□□□□ -0.22
HMG20A-206ENST00000558845 BACH2Q9BYV9 841 aa13.7□□□□□ -0.22
HMG20A-206ENST00000558845 ARAP2Q8WZ64 1704 aa13.7□□□□□ -0.22
HMG20A-206ENST00000558845 COL4A1P02462 1669 aa13.69□□□□□ -0.22
HMG20A-206ENST00000558845 A0A1B0GUL6 1792 aa13.69□□□□□ -0.22
HMG20A-206ENST00000558845 A0A1B0GUL7 405 aa13.69□□□□□ -0.22
HMG20A-206ENST00000558845 ATMINO43313 823 aaPredicted RBP13.69□□□□□ -0.22
HMG20A-206ENST00000558845 ATP5JP18859 108 aa13.69□□□□□ -0.22
HMG20A-206ENST00000558845 PUM3Q15397 648 aaKnown RBP13.69□□□□□ -0.22
HMG20A-206ENST00000558845 LPIN2Q92539 896 aa13.69□□□□□ -0.22
HMG20A-206ENST00000558845 CELF1Q92879 486 aaKnown RBP13.69□□□□□ -0.22
HMG20A-206ENST00000558845 RBM17Q96I25 401 aaKnown RBP13.69□□□□□ -0.22
HMG20A-206ENST00000558845 ZNF512BQ96KM6 892 aaPredicted RBP13.69□□□□□ -0.22
HMG20A-206ENST00000558845 C10orf71Q711Q0 1435 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms