RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 NSFL1CQ9UNZ2 370 aaKnown RBP13.74□□□□□ -0.21
CTDSPL2-203ENST00000558791 C6orf229H3BNL8 230 aa13.73□□□□□ -0.21
CTDSPL2-203ENST00000558791 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
CTDSPL2-203ENST00000558791 HYPKQ9NX55 129 aa13.73□□□□□ -0.21
CTDSPL2-203ENST00000558791 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
CTDSPL2-203ENST00000558791 ZNF609O15014 1411 aa13.73□□□□□ -0.21
CTDSPL2-203ENST00000558791 FAM155AB1AL88 458 aaPredicted RBP13.72□□□□□ -0.21
CTDSPL2-203ENST00000558791 ECE2O60344 883 aa13.72□□□□□ -0.21
CTDSPL2-203ENST00000558791 RPS8P62241 208 aaKnown RBP13.72□□□□□ -0.21
CTDSPL2-203ENST00000558791 HDGFL1Q5TGJ6 251 aa13.72□□□□□ -0.21
CTDSPL2-203ENST00000558791 SAMD7Q7Z3H4 446 aa13.72□□□□□ -0.21
CTDSPL2-203ENST00000558791 ZC3H12CQ9C0D7 883 aaKnown RBP13.72□□□□□ -0.21
CTDSPL2-203ENST00000558791 DBNDD1Q9H9R9 158 aa13.72□□□□□ -0.21
CTDSPL2-203ENST00000558791 PODXL2Q9NZ53 605 aa13.72□□□□□ -0.21
CTDSPL2-203ENST00000558791 PSME4Q14997 1843 aa13.71□□□□□ -0.21
CTDSPL2-203ENST00000558791 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.21
CTDSPL2-203ENST00000558791 ZNF157P51786 506 aaPredicted RBP13.71□□□□□ -0.21
CTDSPL2-203ENST00000558791 TBC1D10BQ4KMP7 808 aaPredicted RBP13.71□□□□□ -0.21
CTDSPL2-203ENST00000558791 SULF1Q8IWU6 871 aa13.71□□□□□ -0.21
CTDSPL2-203ENST00000558791 CELF1Q92879 486 aaKnown RBP13.71□□□□□ -0.21
CTDSPL2-203ENST00000558791 FAM89AQ96GI7 184 aa13.71□□□□□ -0.21
CTDSPL2-203ENST00000558791 CFAP44Q96MT7 982 aa13.71□□□□□ -0.21
CTDSPL2-203ENST00000558791 CHPF2Q9P2E5 772 aa13.71□□□□□ -0.21
CTDSPL2-203ENST00000558791 POLLQ9UGP5 575 aa13.71□□□□□ -0.21
CTDSPL2-203ENST00000558791 SHTN1A0MZ66 631 aa13.7□□□□□ -0.22
CTDSPL2-203ENST00000558791 G3V3G9 751 aa13.7□□□□□ -0.22
CTDSPL2-203ENST00000558791 IRS4O14654 1257 aaPredicted RBP13.7□□□□□ -0.22
CTDSPL2-203ENST00000558791 FKBP1BP68106 108 aa13.7□□□□□ -0.22
CTDSPL2-203ENST00000558791 GPSM2P81274 684 aa13.7□□□□□ -0.22
CTDSPL2-203ENST00000558791 KIF4BQ2VIQ3 1234 aa13.7□□□□□ -0.22
CTDSPL2-203ENST00000558791 DCAF8Q5TAQ9 597 aa13.7□□□□□ -0.22
CTDSPL2-203ENST00000558791 AGBL3Q8NEM8 1001 aa13.7□□□□□ -0.22
CTDSPL2-203ENST00000558791 TBC1D16Q8TBP0 767 aa13.7□□□□□ -0.22
CTDSPL2-203ENST00000558791 CHMP4AQ9BY43 222 aa13.7□□□□□ -0.22
CTDSPL2-203ENST00000558791 TNRC18O15417 2968 aaPredicted RBP13.69□□□□□ -0.22
CTDSPL2-203ENST00000558791 SCN9AQ15858 1988 aa13.69□□□□□ -0.22
CTDSPL2-203ENST00000558791 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
CTDSPL2-203ENST00000558791 SLC10A3P09131 477 aa13.69□□□□□ -0.22
CTDSPL2-203ENST00000558791 KIF23Q02241 960 aaPredicted RBP13.69□□□□□ -0.22
CTDSPL2-203ENST00000558791 ZBTB38Q8NAP3 1195 aaPredicted RBP13.69□□□□□ -0.22
CTDSPL2-203ENST00000558791 RUNDC1Q96C34 613 aa13.69□□□□□ -0.22
CTDSPL2-203ENST00000558791 RTL9Q8NET4 1388 aa13.69□□□□□ -0.22
CTDSPL2-203ENST00000558791 PITPNM2Q9BZ72 1349 aa13.68□□□□□ -0.22
CTDSPL2-203ENST00000558791 ZIC5Q96T25 663 aa13.68□□□□□ -0.22
CTDSPL2-203ENST00000558791 GGA1Q9UJY5 639 aa13.68□□□□□ -0.22
CTDSPL2-203ENST00000558791 ADM5C9JUS6 153 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 ATP5J2-PTCD1G3V325 749 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 EGFRP00533 1210 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 MMP14P50281 582 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 ZNF280AP59817 542 aaPredicted RBP13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 NEUROD2Q15784 382 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 CCDC152Q4G0S7 254 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 RBM26Q5T8P6 1007 aaKnown RBP13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 RNF186Q9NXI6 227 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 GGA3Q9NZ52 723 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 ANKIB1Q9P2G1 1089 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 LAS1LQ9Y4W2 734 aaKnown RBP13.67□□□□□ -0.22
CTDSPL2-203ENST00000558791 PAPPA2Q9BXP8 1791 aa13.66□□□□□ -0.22
CTDSPL2-203ENST00000558791 TRPA1O75762 1119 aa13.66□□□□□ -0.22
CTDSPL2-203ENST00000558791 PKN2Q16513 984 aaKnown RBP13.66□□□□□ -0.22
CTDSPL2-203ENST00000558791 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
CTDSPL2-203ENST00000558791 RSBN1LQ6PCB5 846 aaPredicted RBP13.66□□□□□ -0.22
CTDSPL2-203ENST00000558791 RIC3Q7Z5B4 369 aa13.66□□□□□ -0.22
CTDSPL2-203ENST00000558791 PODNQ7Z5L7 613 aa13.66□□□□□ -0.22
CTDSPL2-203ENST00000558791 CCDC191Q8NCU4 936 aa13.66□□□□□ -0.22
CTDSPL2-203ENST00000558791 CSRNP1Q96S65 589 aa13.66□□□□□ -0.22
CTDSPL2-203ENST00000558791 MYBBP1AQ9BQG0 1328 aaKnown RBP13.65□□□□□ -0.22
CTDSPL2-203ENST00000558791 PDE8AO60658 829 aa13.65□□□□□ -0.22
CTDSPL2-203ENST00000558791 UFL1O94874 794 aa13.65□□□□□ -0.22
CTDSPL2-203ENST00000558791 PCCAP05165 728 aaPredicted RBP13.65□□□□□ -0.22
CTDSPL2-203ENST00000558791 WDR43Q15061 677 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTDSPL2-203ENST00000558791 DUSP27Q5VZP5 1158 aa13.65□□□□□ -0.22
CTDSPL2-203ENST00000558791 CTU1Q7Z7A3 348 aaKnown RBP13.65□□□□□ -0.22
CTDSPL2-203ENST00000558791 CDCA5Q96FF9 252 aa13.65□□□□□ -0.22
CTDSPL2-203ENST00000558791 KCNQ5Q9NR82 932 aa13.65□□□□□ -0.22
CTDSPL2-203ENST00000558791 XDHP47989 1333 aa13.64□□□□□ -0.23
CTDSPL2-203ENST00000558791 ATP2B4P23634 1241 aa13.64□□□□□ -0.23
CTDSPL2-203ENST00000558791 CALD1Q05682 793 aaKnown RBP13.64□□□□□ -0.23
CTDSPL2-203ENST00000558791 DLK2Q6UY11 383 aa13.64□□□□□ -0.23
CTDSPL2-203ENST00000558791 MYH3P11055 1940 aa13.64□□□□□ -0.23
CTDSPL2-203ENST00000558791 USP17L3A6NCW0 530 aa13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 USP17L4A6NCW7 530 aa13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 DDX58O95786 925 aaKnown RBP13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 USP17L8P0C7I0 530 aa13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 SCARF1Q14162 830 aa13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 NOM1Q5C9Z4 860 aaKnown RBP13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 RTL5Q5HYW3 569 aaPredicted RBP13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 ANGEL2Q5VTE6 544 aaKnown RBP13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 USP17L1Q7RTZ2 530 aa13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 RASAL3Q86YV0 1011 aa13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 ANKRD18AQ8IVF6 992 aa13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 GMLQ99445 158 aa13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 MYOZ2Q9NPC6 264 aa13.63□□□□□ -0.23
CTDSPL2-203ENST00000558791 CCDC146Q8IYE0 955 aa13.62□□□□□ -0.23
CTDSPL2-203ENST00000558791 CDC5LQ99459 802 aaKnown RBP13.62□□□□□ -0.23
CTDSPL2-203ENST00000558791 SEC31BQ9NQW1 1179 aa13.62□□□□□ -0.23
CTDSPL2-203ENST00000558791 CWC25Q9NXE8 425 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms