RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 MS4A1P11836 297 aa15.66■□□□□ 0.1
LRRC28-206ENST00000558471 TAF7LQ5H9L4 462 aa15.66■□□□□ 0.1
LRRC28-206ENST00000558471 ITPRIPQ8IWB1 547 aa15.66■□□□□ 0.1
LRRC28-206ENST00000558471 ZNF784Q8NCA9 323 aaPredicted RBP15.66■□□□□ 0.1
LRRC28-206ENST00000558471 TBC1D16Q8TBP0 767 aa15.66■□□□□ 0.1
LRRC28-206ENST00000558471 VPS33BQ9H267 617 aa15.66■□□□□ 0.1
LRRC28-206ENST00000558471 COL4A5P29400 1685 aa15.65■□□□□ 0.1
LRRC28-206ENST00000558471 WTIPA6NIX2 430 aaPredicted RBP15.65■□□□□ 0.1
LRRC28-206ENST00000558471 C6orf229H3BNL8 230 aa15.65■□□□□ 0.1
LRRC28-206ENST00000558471 ZBTB7BO15156 539 aaPredicted RBP15.65■□□□□ 0.1
LRRC28-206ENST00000558471 PPIP5K2O43314 1243 aa15.65■□□□□ 0.1
LRRC28-206ENST00000558471 AOC3Q16853 763 aa15.65■□□□□ 0.1
LRRC28-206ENST00000558471 LDHAL6AQ6ZMR3 332 aa15.65■□□□□ 0.1
LRRC28-206ENST00000558471 LARGE2Q8N3Y3 721 aa15.65■□□□□ 0.1
LRRC28-206ENST00000558471 XDHP47989 1333 aa15.65■□□□□ 0.1
LRRC28-206ENST00000558471 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
LRRC28-206ENST00000558471 RFX5P48382 616 aaPredicted RBP15.64■□□□□ 0.09
LRRC28-206ENST00000558471 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.64■□□□□ 0.09
LRRC28-206ENST00000558471 KLHDC4Q8TBB5 520 aa15.64■□□□□ 0.09
LRRC28-206ENST00000558471 ZNF526Q8TF50 670 aaPredicted RBP15.64■□□□□ 0.09
LRRC28-206ENST00000558471 GPR101Q96P66 508 aaPredicted RBP15.64■□□□□ 0.09
LRRC28-206ENST00000558471 PUS3Q9BZE2 481 aaKnown RBP15.64■□□□□ 0.09
LRRC28-206ENST00000558471 GGA1Q9UJY5 639 aa15.64■□□□□ 0.09
LRRC28-206ENST00000558471 A0A1B0GUL6 1792 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 RIMBP2O15034 1052 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 UFL1O94874 794 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 GNAI2P04899 355 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 ATP2B4P23634 1241 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 CHRNDQ07001 517 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 KIAA2012Q0VF49 1180 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 WASHC4Q2M389 1173 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 C20orf194Q5TEA3 1177 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 JDP2Q8WYK2 163 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 ANKRD2Q9GZV1 360 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 CNNM1Q9NRU3 951 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 COG6Q9Y2V7 657 aa15.63■□□□□ 0.09
LRRC28-206ENST00000558471 FZD9O00144 591 aa15.62■□□□□ 0.09
LRRC28-206ENST00000558471 TAF5LO75529 589 aa15.62■□□□□ 0.09
LRRC28-206ENST00000558471 PDE3AQ14432 1141 aa15.62■□□□□ 0.09
LRRC28-206ENST00000558471 MVPQ14764 893 aaKnown RBP15.62■□□□□ 0.09
LRRC28-206ENST00000558471 HELBQ8NG08 1087 aaPredicted RBP15.62■□□□□ 0.09
LRRC28-206ENST00000558471 EYA3Q99504 573 aa15.62■□□□□ 0.09
LRRC28-206ENST00000558471 RIPOR2Q9Y4F9 1068 aa15.62■□□□□ 0.09
LRRC28-206ENST00000558471 GLTPD2A6NH11 291 aa15.61■□□□□ 0.09
LRRC28-206ENST00000558471 PTPN12Q05209 780 aaKnown RBP15.61■□□□□ 0.09
LRRC28-206ENST00000558471 LRRC24Q50LG9 513 aa15.61■□□□□ 0.09
LRRC28-206ENST00000558471 DPY19L2Q6NUT2 758 aa15.61■□□□□ 0.09
LRRC28-206ENST00000558471 NIM1KQ8IY84 436 aa15.61■□□□□ 0.09
LRRC28-206ENST00000558471 ZC3H12CQ9C0D7 883 aaKnown RBP15.61■□□□□ 0.09
LRRC28-206ENST00000558471 LEMD3Q9Y2U8 911 aa15.61■□□□□ 0.09
LRRC28-206ENST00000558471 SNAP23O00161 211 aa15.6■□□□□ 0.09
LRRC28-206ENST00000558471 MTX1Q13505 466 aa15.6■□□□□ 0.09
LRRC28-206ENST00000558471 C1orf115Q9H7X2 142 aa15.6■□□□□ 0.09
LRRC28-206ENST00000558471 GPBP1L1Q9HC44 474 aaPredicted RBP15.6■□□□□ 0.09
LRRC28-206ENST00000558471 ZNF804BA4D1E1 1349 aa15.6■□□□□ 0.09
LRRC28-206ENST00000558471 ZNF541Q9H0D2 1346 aa15.6■□□□□ 0.09
LRRC28-206ENST00000558471 SRGAP3O43295 1099 aa15.59■□□□□ 0.09
LRRC28-206ENST00000558471 DDNO94850 711 aaPredicted RBP15.59■□□□□ 0.09
LRRC28-206ENST00000558471 DOK7Q18PE1 504 aa15.59■□□□□ 0.09
LRRC28-206ENST00000558471 DBNDD1Q9H9R9 158 aa15.59■□□□□ 0.09
LRRC28-206ENST00000558471 ZNRF3Q9ULT6 936 aa15.59■□□□□ 0.09
LRRC28-206ENST00000558471 DDX19BQ9UMR2 479 aa15.59■□□□□ 0.09
LRRC28-206ENST00000558471 KDM2BQ8NHM5 1336 aa15.59■□□□□ 0.09
LRRC28-206ENST00000558471 PNMA6EA0A0J9YXQ4 647 aa15.58■□□□□ 0.08
LRRC28-206ENST00000558471 YDJCA8MPS7 323 aa15.58■□□□□ 0.08
LRRC28-206ENST00000558471 EYA2O00167 538 aa15.58■□□□□ 0.08
LRRC28-206ENST00000558471 RRP1P56182 461 aaKnown RBP15.58■□□□□ 0.08
LRRC28-206ENST00000558471 EIF6P56537 245 aaKnown RBP15.58■□□□□ 0.08
LRRC28-206ENST00000558471 ATP8B2P98198 1209 aa15.58■□□□□ 0.08
LRRC28-206ENST00000558471 TXNRD3Q86VQ6 643 aa15.58■□□□□ 0.08
LRRC28-206ENST00000558471 NMRK2Q9NPI5 230 aa15.58■□□□□ 0.08
LRRC28-206ENST00000558471 COPRSQ9NQ92 184 aa15.58■□□□□ 0.08
LRRC28-206ENST00000558471 PA2G4Q9UQ80 394 aaKnown RBP15.58■□□□□ 0.08
LRRC28-206ENST00000558471 MROH5Q6ZUA9 1318 aa15.58■□□□□ 0.08
LRRC28-206ENST00000558471 KLRK1P26718 216 aa15.57■□□□□ 0.08
LRRC28-206ENST00000558471 KCNJ4P48050 445 aa15.57■□□□□ 0.08
LRRC28-206ENST00000558471 CXCL9Q07325 125 aa15.57■□□□□ 0.08
LRRC28-206ENST00000558471 ATG9AQ7Z3C6 839 aa15.57■□□□□ 0.08
LRRC28-206ENST00000558471 SIL1Q9H173 461 aa15.57■□□□□ 0.08
LRRC28-206ENST00000558471 RRAGCQ9HB90 399 aa15.57■□□□□ 0.08
LRRC28-206ENST00000558471 ZBTB40Q9NUA8 1239 aa15.57■□□□□ 0.08
LRRC28-206ENST00000558471 MED23Q9ULK4 1368 aa15.57■□□□□ 0.08
LRRC28-206ENST00000558471 SCN9AQ15858 1988 aa15.56■□□□□ 0.08
LRRC28-206ENST00000558471 POTECB2RU33 542 aa15.56■□□□□ 0.08
LRRC28-206ENST00000558471 ECE2O60344 883 aa15.56■□□□□ 0.08
LRRC28-206ENST00000558471 METTL24Q5JXM2 366 aa15.56■□□□□ 0.08
LRRC28-206ENST00000558471 VGLL2Q8N8G2 317 aa15.56■□□□□ 0.08
LRRC28-206ENST00000558471 KCNQ5Q9NR82 932 aa15.56■□□□□ 0.08
LRRC28-206ENST00000558471 FBXO3Q9UK99 471 aa15.56■□□□□ 0.08
LRRC28-206ENST00000558471 GJA3Q9Y6H8 435 aa15.56■□□□□ 0.08
LRRC28-206ENST00000558471 WDR90Q96KV7 1748 aa15.55■□□□□ 0.08
LRRC28-206ENST00000558471 IRS2Q9Y4H2 1338 aa15.55■□□□□ 0.08
LRRC28-206ENST00000558471 G3V3G9 751 aa15.55■□□□□ 0.08
LRRC28-206ENST00000558471 RAD17O75943 681 aa15.55■□□□□ 0.08
LRRC28-206ENST00000558471 CIAO1O76071 339 aa15.55■□□□□ 0.08
LRRC28-206ENST00000558471 PDE8BO95263 885 aa15.55■□□□□ 0.08
LRRC28-206ENST00000558471 POLA2Q14181 598 aa15.55■□□□□ 0.08
LRRC28-206ENST00000558471 DCAF8Q5TAQ9 597 aa15.55■□□□□ 0.08
LRRC28-206ENST00000558471 GPC2Q8N158 579 aa15.55■□□□□ 0.08
LRRC28-206ENST00000558471 UBE4AQ14139 1066 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms