RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 GPBP1L1Q9HC44 474 aaPredicted RBP15.51■□□□□ 0.07
SMAD3-205ENST00000558428 ZNF594Q96JF6 807 aaPredicted RBP15.5■□□□□ 0.07
SMAD3-205ENST00000558428 PODXL2Q9NZ53 605 aa15.5■□□□□ 0.07
SMAD3-205ENST00000558428 POLLQ9UGP5 575 aa15.5■□□□□ 0.07
SMAD3-205ENST00000558428 GGA1Q9UJY5 639 aa15.5■□□□□ 0.07
SMAD3-205ENST00000558428 MINPP1Q9UNW1 487 aa15.5■□□□□ 0.07
SMAD3-205ENST00000558428 HDAC5Q9UQL6 1122 aa15.5■□□□□ 0.07
SMAD3-205ENST00000558428 XDHP47989 1333 aa15.49■□□□□ 0.07
SMAD3-205ENST00000558428 COL4A5P29400 1685 aa15.49■□□□□ 0.07
SMAD3-205ENST00000558428 UFL1O94874 794 aa15.49■□□□□ 0.07
SMAD3-205ENST00000558428 GNAI3P08754 354 aa15.49■□□□□ 0.07
SMAD3-205ENST00000558428 NIM1KQ8IY84 436 aa15.49■□□□□ 0.07
SMAD3-205ENST00000558428 TBC1D16Q8TBP0 767 aa15.49■□□□□ 0.07
SMAD3-205ENST00000558428 EYA3Q99504 573 aa15.49■□□□□ 0.07
SMAD3-205ENST00000558428 LRRFIP2Q9Y608 721 aaKnown RBP15.49■□□□□ 0.07
SMAD3-205ENST00000558428 KDM2BQ8NHM5 1336 aa15.48■□□□□ 0.07
SMAD3-205ENST00000558428 GLTPD2A6NH11 291 aa15.48■□□□□ 0.07
SMAD3-205ENST00000558428 RLBP1P12271 317 aa15.48■□□□□ 0.07
SMAD3-205ENST00000558428 ATP2B4P23634 1241 aa15.48■□□□□ 0.07
SMAD3-205ENST00000558428 KIAA2012Q0VF49 1180 aa15.48■□□□□ 0.07
SMAD3-205ENST00000558428 WASHC4Q2M389 1173 aa15.48■□□□□ 0.07
SMAD3-205ENST00000558428 DPY19L2Q6NUT2 758 aa15.48■□□□□ 0.07
SMAD3-205ENST00000558428 LDHAL6AQ6ZMR3 332 aa15.48■□□□□ 0.07
SMAD3-205ENST00000558428 ITPRIPQ8IWB1 547 aa15.48■□□□□ 0.07
SMAD3-205ENST00000558428 GPR101Q96P66 508 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-205ENST00000558428 FZD9O00144 591 aa15.47■□□□□ 0.07
SMAD3-205ENST00000558428 RIMBP2O15034 1052 aa15.47■□□□□ 0.07
SMAD3-205ENST00000558428 PLIN1O60240 522 aa15.47■□□□□ 0.07
SMAD3-205ENST00000558428 MS4A1P11836 297 aa15.47■□□□□ 0.07
SMAD3-205ENST00000558428 CHRNDQ07001 517 aa15.47■□□□□ 0.07
SMAD3-205ENST00000558428 PANK1Q8TE04 598 aa15.47■□□□□ 0.07
SMAD3-205ENST00000558428 ANKRD2Q9GZV1 360 aa15.47■□□□□ 0.07
SMAD3-205ENST00000558428 CNNM1Q9NRU3 951 aa15.47■□□□□ 0.07
SMAD3-205ENST00000558428 A0A1B0GUL6 1792 aa15.47■□□□□ 0.07
SMAD3-205ENST00000558428 ZNF541Q9H0D2 1346 aa15.46■□□□□ 0.07
SMAD3-205ENST00000558428 EIF6P56537 245 aaKnown RBP15.46■□□□□ 0.07
SMAD3-205ENST00000558428 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.46■□□□□ 0.07
SMAD3-205ENST00000558428 ZC3H12CQ9C0D7 883 aaKnown RBP15.46■□□□□ 0.07
SMAD3-205ENST00000558428 DDNO94850 711 aaPredicted RBP15.45■□□□□ 0.06
SMAD3-205ENST00000558428 GNAI2P04899 355 aa15.45■□□□□ 0.06
SMAD3-205ENST00000558428 NMRK2Q9NPI5 230 aa15.45■□□□□ 0.06
SMAD3-205ENST00000558428 ZNRF3Q9ULT6 936 aa15.45■□□□□ 0.06
SMAD3-205ENST00000558428 G3V3G9 751 aa15.44■□□□□ 0.06
SMAD3-205ENST00000558428 KCNJ4P48050 445 aa15.44■□□□□ 0.06
SMAD3-205ENST00000558428 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
SMAD3-205ENST00000558428 HELBQ8NG08 1087 aaPredicted RBP15.44■□□□□ 0.06
SMAD3-205ENST00000558428 KLHDC4Q8TBB5 520 aa15.44■□□□□ 0.06
SMAD3-205ENST00000558428 PUS3Q9BZE2 481 aaKnown RBP15.44■□□□□ 0.06
SMAD3-205ENST00000558428 DBNDD1Q9H9R9 158 aa15.44■□□□□ 0.06
SMAD3-205ENST00000558428 LEMD3Q9Y2U8 911 aa15.44■□□□□ 0.06
SMAD3-205ENST00000558428 WDR90Q96KV7 1748 aa15.43■□□□□ 0.06
SMAD3-205ENST00000558428 WTIPA6NIX2 430 aaPredicted RBP15.43■□□□□ 0.06
SMAD3-205ENST00000558428 TAF5LO75529 589 aa15.43■□□□□ 0.06
SMAD3-205ENST00000558428 RFX5P48382 616 aaPredicted RBP15.43■□□□□ 0.06
SMAD3-205ENST00000558428 DOK7Q18PE1 504 aa15.43■□□□□ 0.06
SMAD3-205ENST00000558428 RRAGCQ9HB90 399 aa15.43■□□□□ 0.06
SMAD3-205ENST00000558428 GJA3Q9Y6H8 435 aa15.43■□□□□ 0.06
SMAD3-205ENST00000558428 ZNF804BA4D1E1 1349 aa15.43■□□□□ 0.06
SMAD3-205ENST00000558428 MED23Q9ULK4 1368 aa15.42■□□□□ 0.06
SMAD3-205ENST00000558428 ZBTB7BO15156 539 aaPredicted RBP15.42■□□□□ 0.06
SMAD3-205ENST00000558428 ECE2O60344 883 aa15.42■□□□□ 0.06
SMAD3-205ENST00000558428 PTPN12Q05209 780 aaKnown RBP15.42■□□□□ 0.06
SMAD3-205ENST00000558428 LRRC24Q50LG9 513 aa15.42■□□□□ 0.06
SMAD3-205ENST00000558428 GPC2Q8N158 579 aa15.42■□□□□ 0.06
SMAD3-205ENST00000558428 MROH5Q6ZUA9 1318 aa15.42■□□□□ 0.06
SMAD3-205ENST00000558428 YDJCA8MPS7 323 aa15.41■□□□□ 0.06
SMAD3-205ENST00000558428 SNAP23O00161 211 aa15.41■□□□□ 0.06
SMAD3-205ENST00000558428 KIF3CO14782 793 aa15.41■□□□□ 0.06
SMAD3-205ENST00000558428 RAD17O75943 681 aa15.41■□□□□ 0.06
SMAD3-205ENST00000558428 CXCL9Q07325 125 aa15.41■□□□□ 0.06
SMAD3-205ENST00000558428 MVPQ14764 893 aaKnown RBP15.41■□□□□ 0.06
SMAD3-205ENST00000558428 C1orf115Q9H7X2 142 aa15.41■□□□□ 0.06
SMAD3-205ENST00000558428 COG6Q9Y2V7 657 aa15.41■□□□□ 0.06
SMAD3-205ENST00000558428 RIPOR2Q9Y4F9 1068 aa15.41■□□□□ 0.06
SMAD3-205ENST00000558428 SCN9AQ15858 1988 aa15.41■□□□□ 0.06
SMAD3-205ENST00000558428 EYA2O00167 538 aa15.4■□□□□ 0.06
SMAD3-205ENST00000558428 SRGAP3O43295 1099 aa15.4■□□□□ 0.06
SMAD3-205ENST00000558428 VEGFAP15692 232 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-205ENST00000558428 MTX1Q13505 466 aa15.4■□□□□ 0.06
SMAD3-205ENST00000558428 PDE3AQ14432 1141 aa15.4■□□□□ 0.06
SMAD3-205ENST00000558428 METTL24Q5JXM2 366 aa15.4■□□□□ 0.06
SMAD3-205ENST00000558428 CIAPIN1Q6FI81 312 aa15.4■□□□□ 0.06
SMAD3-205ENST00000558428 L3MBTL3Q96JM7 780 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-205ENST00000558428 SIL1Q9H173 461 aa15.4■□□□□ 0.06
SMAD3-205ENST00000558428 PA2G4Q9UQ80 394 aaKnown RBP15.4■□□□□ 0.06
SMAD3-205ENST00000558428 SCN4AP35499 1836 aa15.4■□□□□ 0.06
SMAD3-205ENST00000558428 POTECB2RU33 542 aa15.39■□□□□ 0.05
SMAD3-205ENST00000558428 KLRK1P26718 216 aa15.39■□□□□ 0.05
SMAD3-205ENST00000558428 TNIP1Q15025 636 aa15.39■□□□□ 0.05
SMAD3-205ENST00000558428 C20orf194Q5TEA3 1177 aa15.39■□□□□ 0.05
SMAD3-205ENST00000558428 TXNRD3Q86VQ6 643 aa15.39■□□□□ 0.05
SMAD3-205ENST00000558428 C16orf71Q8IYS4 520 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-205ENST00000558428 DDX19BQ9UMR2 479 aa15.39■□□□□ 0.05
SMAD3-205ENST00000558428 PNMA6EA0A0J9YXQ4 647 aa15.38■□□□□ 0.05
SMAD3-205ENST00000558428 IQCA1LA6NCM1 817 aa15.38■□□□□ 0.05
SMAD3-205ENST00000558428 UBE4AQ14139 1066 aa15.38■□□□□ 0.05
SMAD3-205ENST00000558428 KCNQ5Q9NR82 932 aa15.38■□□□□ 0.05
SMAD3-205ENST00000558428 FBXO3Q9UK99 471 aa15.38■□□□□ 0.05
SMAD3-205ENST00000558428 PSME4Q14997 1843 aa15.38■□□□□ 0.05
SMAD3-205ENST00000558428 PSMD14O00487 310 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms