RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 ANKRD2Q9GZV1 360 aa13.02□□□□□ -0.33
LRRC28-204ENST00000558172 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
LRRC28-204ENST00000558172 MINPP1Q9UNW1 487 aa13.02□□□□□ -0.33
LRRC28-204ENST00000558172 EYA2O00167 538 aa13.01□□□□□ -0.33
LRRC28-204ENST00000558172 CIAO1O76071 339 aa13.01□□□□□ -0.33
LRRC28-204ENST00000558172 NEFLP07196 543 aa13.01□□□□□ -0.33
LRRC28-204ENST00000558172 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.331e-6■■■□□ 17.7
LRRC28-204ENST00000558172 MPNDQ8N594 471 aa13.01□□□□□ -0.33
LRRC28-204ENST00000558172 PODXL2Q9NZ53 605 aa13.01□□□□□ -0.33
LRRC28-204ENST00000558172 MROH5Q6ZUA9 1318 aa13.01□□□□□ -0.33
LRRC28-204ENST00000558172 DICER1Q9UPY3 1922 aaKnown RBP13.01□□□□□ -0.33
LRRC28-204ENST00000558172 CHD4Q14839 1912 aa13□□□□□ -0.33
LRRC28-204ENST00000558172 XDHP47989 1333 aa13□□□□□ -0.33
LRRC28-204ENST00000558172 IL15P40933 162 aaPredicted RBP13□□□□□ -0.33
LRRC28-204ENST00000558172 IRX6P78412 446 aaPredicted RBP13□□□□□ -0.33
LRRC28-204ENST00000558172 G3BP1Q13283 466 aaKnown RBP eCLIP13□□□□□ -0.33
LRRC28-204ENST00000558172 DPP8Q6V1X1 898 aaPredicted RBP13□□□□□ -0.33
LRRC28-204ENST00000558172 SUPT20HQ8NEM7 779 aa13□□□□□ -0.33
LRRC28-204ENST00000558172 KLHDC4Q8TBB5 520 aa13□□□□□ -0.33
LRRC28-204ENST00000558172 PSMD1Q99460 953 aa13□□□□□ -0.33
LRRC28-204ENST00000558172 NSFL1CQ9UNZ2 370 aaKnown RBP13□□□□□ -0.33
LRRC28-204ENST00000558172 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
LRRC28-204ENST00000558172 LTBP1Q14766 1721 aa12.99□□□□□ -0.33
LRRC28-204ENST00000558172 LTBP3Q9NS15 1303 aa12.99□□□□□ -0.33
LRRC28-204ENST00000558172 ATP2B4P23634 1241 aa12.99□□□□□ -0.33
LRRC28-204ENST00000558172 FKBP4Q02790 459 aaKnown RBP eCLIP12.99□□□□□ -0.33
LRRC28-204ENST00000558172 CHRNDQ07001 517 aa12.99□□□□□ -0.33
LRRC28-204ENST00000558172 HSP90AB4PQ58FF6 505 aa12.99□□□□□ -0.33
LRRC28-204ENST00000558172 ARHGAP27Q6ZUM4 889 aa12.99□□□□□ -0.33
LRRC28-204ENST00000558172 SIRT2Q8IXJ6 389 aa12.99□□□□□ -0.33
LRRC28-204ENST00000558172 PUS3Q9BZE2 481 aaKnown RBP12.99□□□□□ -0.33
LRRC28-204ENST00000558172 VPS33BQ9H267 617 aa12.99□□□□□ -0.33
LRRC28-204ENST00000558172 ANKIB1Q9P2G1 1089 aa12.99□□□□□ -0.33
LRRC28-204ENST00000558172 PA2G4Q9UQ80 394 aaKnown RBP12.99□□□□□ -0.33
LRRC28-204ENST00000558172 LEMD3Q9Y2U8 911 aa12.99□□□□□ -0.33
LRRC28-204ENST00000558172 NOP58Q9Y2X3 529 aaKnown RBP12.99□□□□□ -0.33
LRRC28-204ENST00000558172 SNED1Q8TER0 1413 aa12.98□□□□□ -0.33
LRRC28-204ENST00000558172 SURF6O75683 361 aaKnown RBP12.98□□□□□ -0.33
LRRC28-204ENST00000558172 GPSM2P81274 684 aa12.98□□□□□ -0.33
LRRC28-204ENST00000558172 LRRC24Q50LG9 513 aa12.98□□□□□ -0.33
LRRC28-204ENST00000558172 OLFM4Q6UX06 510 aa12.98□□□□□ -0.33
LRRC28-204ENST00000558172 RTFDC1Q9BY42 306 aaPredicted RBP12.98□□□□□ -0.33
LRRC28-204ENST00000558172 SIL1Q9H173 461 aa12.98□□□□□ -0.33
LRRC28-204ENST00000558172 TAOK3Q9H2K8 898 aa12.98□□□□□ -0.33
LRRC28-204ENST00000558172 PCDHB15Q9Y5E8 787 aa12.98□□□□□ -0.33
LRRC28-204ENST00000558172 METTL24Q5JXM2 366 aa12.97□□□□□ -0.33
LRRC28-204ENST00000558172 ATG9AQ7Z3C6 839 aa12.97□□□□□ -0.33
LRRC28-204ENST00000558172 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
LRRC28-204ENST00000558172 EYA3Q99504 573 aa12.97□□□□□ -0.33
LRRC28-204ENST00000558172 CEP126Q9P2H0 1117 aa12.97□□□□□ -0.33
LRRC28-204ENST00000558172 GGA1Q9UJY5 639 aa12.97□□□□□ -0.33
LRRC28-204ENST00000558172 C6orf229H3BNL8 230 aa12.96□□□□□ -0.33
LRRC28-204ENST00000558172 NFKBIEO00221 500 aa12.96□□□□□ -0.33
LRRC28-204ENST00000558172 RAB11FIP3O75154 756 aa12.96□□□□□ -0.33
LRRC28-204ENST00000558172 PDE8BO95263 885 aa12.96□□□□□ -0.33
LRRC28-204ENST00000558172 KCNJ4P48050 445 aa12.96□□□□□ -0.33
LRRC28-204ENST00000558172 OS9Q13438 667 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-204ENST00000558172 HDAC1Q13547 482 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-204ENST00000558172 TBC1D16Q8TBP0 767 aa12.96□□□□□ -0.33
LRRC28-204ENST00000558172 RWDD1Q9H446 243 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-204ENST00000558172 GOLGB1Q14789 3259 aaKnown RBP12.96□□□□□ -0.34
LRRC28-204ENST00000558172 ZNF804BA4D1E1 1349 aa12.95□□□□□ -0.34
LRRC28-204ENST00000558172 TAF5LO75529 589 aa12.95□□□□□ -0.34
LRRC28-204ENST00000558172 UBE4AQ14139 1066 aa12.95□□□□□ -0.34
LRRC28-204ENST00000558172 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
LRRC28-204ENST00000558172 VGLL2Q8N8G2 317 aa12.95□□□□□ -0.34
LRRC28-204ENST00000558172 HELBQ8NG08 1087 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-204ENST00000558172 ZC3H12CQ9C0D7 883 aaKnown RBP12.95□□□□□ -0.34
LRRC28-204ENST00000558172 DCTPP1Q9H773 170 aa12.95□□□□□ -0.34
LRRC28-204ENST00000558172 POLLQ9UGP5 575 aa12.95□□□□□ -0.34
LRRC28-204ENST00000558172 AKAP2Q9Y2D5 859 aa12.95□□□□□ -0.34
LRRC28-204ENST00000558172 DUOX1Q9NRD9 1551 aa12.94□□□□□ -0.34
LRRC28-204ENST00000558172 UFL1O94874 794 aa12.94□□□□□ -0.34
LRRC28-204ENST00000558172 LMNB1P20700 586 aa12.94□□□□□ -0.34
LRRC28-204ENST00000558172 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
LRRC28-204ENST00000558172 WASHC4Q2M389 1173 aa12.94□□□□□ -0.34
LRRC28-204ENST00000558172 GPR108Q9NPR9 543 aa12.94□□□□□ -0.34
LRRC28-204ENST00000558172 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
LRRC28-204ENST00000558172 MED23Q9ULK4 1368 aa12.94□□□□□ -0.34
LRRC28-204ENST00000558172 SASH1O94885 1247 aa12.93□□□□□ -0.34
LRRC28-204ENST00000558172 RASSF7Q02833 373 aa12.93□□□□□ -0.34
LRRC28-204ENST00000558172 KIAA2012Q0VF49 1180 aa12.93□□□□□ -0.34
LRRC28-204ENST00000558172 TFCP2Q12800 502 aa12.93□□□□□ -0.34
LRRC28-204ENST00000558172 PUM3Q15397 648 aaKnown RBP12.93□□□□□ -0.34
LRRC28-204ENST00000558172 C15orf52Q6ZUT6 534 aaKnown RBP12.93□□□□□ -0.34
LRRC28-204ENST00000558172 SLC51AQ86UW1 340 aa12.93□□□□□ -0.34
LRRC28-204ENST00000558172 LPIN2Q92539 896 aa12.93□□□□□ -0.34
LRRC28-204ENST00000558172 GCC1Q96CN9 775 aa12.93□□□□□ -0.34
LRRC28-204ENST00000558172 KIF1BPQ96EK5 621 aa12.93□□□□□ -0.34
LRRC28-204ENST00000558172 PPIP5K2O43314 1243 aa12.92□□□□□ -0.34
LRRC28-204ENST00000558172 IFIT1P09914 478 aaKnown RBP12.92□□□□□ -0.34
LRRC28-204ENST00000558172 SLC5A1P13866 664 aa12.92□□□□□ -0.34
LRRC28-204ENST00000558172 FGFR2P21802 821 aa12.92□□□□□ -0.34
LRRC28-204ENST00000558172 ATP2B3Q16720 1220 aa12.92□□□□□ -0.34
LRRC28-204ENST00000558172 LARGE2Q8N3Y3 721 aa12.92□□□□□ -0.34
LRRC28-204ENST00000558172 JDP2Q8WYK2 163 aa12.92□□□□□ -0.34
LRRC28-204ENST00000558172 ARAP2Q8WZ64 1704 aa12.92□□□□□ -0.34
LRRC28-204ENST00000558172 ZNF277Q9NRM2 450 aaPredicted RBP12.92□□□□□ -0.34
LRRC28-204ENST00000558172 MYH13Q9UKX3 1938 aa12.92□□□□□ -0.34
LRRC28-204ENST00000558172 G3V3G9 751 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms