RNA–Protein interactions for RNA: ENST00000557609.5

LGMN-217, Transcript of legumain, humanhuman

TSL 5

Gene LGMN, Length 1,832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-217ENST00000557609 IGHMBP2P38935 993 aaKnown RBP20.42■□□□□ 0.86
LGMN-217ENST00000557609 HSCBQ8IWL3 235 aa20.42■□□□□ 0.86
LGMN-217ENST00000557609 PROM2Q8N271 834 aa20.42■□□□□ 0.86
LGMN-217ENST00000557609 SNX21Q969T3 373 aa20.42■□□□□ 0.86
LGMN-217ENST00000557609 RGS17Q9UGC6 210 aaPredicted RBP20.42■□□□□ 0.86
LGMN-217ENST00000557609 IFIT1P09914 478 aaKnown RBP20.41■□□□□ 0.86
LGMN-217ENST00000557609 RABEP1Q15276 862 aa20.41■□□□□ 0.86
LGMN-217ENST00000557609 SF3B3Q15393 1217 aaKnown RBP20.41■□□□□ 0.86
LGMN-217ENST00000557609 TPTE2Q6XPS3 522 aa20.41■□□□□ 0.86
LGMN-217ENST00000557609 KIAA1211Q6ZU35 1233 aa20.41■□□□□ 0.86
LGMN-217ENST00000557609 C3orf67Q6ZVT6 689 aa20.41■□□□□ 0.86
LGMN-217ENST00000557609 ABCC12Q96J65 1359 aa20.41■□□□□ 0.86
LGMN-217ENST00000557609 COL24A1Q17RW2 1714 aa20.41■□□□□ 0.86
LGMN-217ENST00000557609 APBA3O96018 575 aa20.41■□□□□ 0.86
LGMN-217ENST00000557609 HMGB2P26583 209 aaKnown RBP20.41■□□□□ 0.86
LGMN-217ENST00000557609 SSFA2P28290 1259 aa20.41■□□□□ 0.86
LGMN-217ENST00000557609 NMIQ13287 307 aaPredicted RBP20.41■□□□□ 0.86
LGMN-217ENST00000557609 TTC39AQ5SRH9 613 aa20.41■□□□□ 0.86
LGMN-217ENST00000557609 FBXO41Q8TF61 875 aa20.41■□□□□ 0.86
LGMN-217ENST00000557609 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.41■□□□□ 0.86
LGMN-217ENST00000557609 PLSCR1O15162 318 aa20.4■□□□□ 0.86
LGMN-217ENST00000557609 DDX46Q7L014 1031 aaKnown RBP20.4■□□□□ 0.86
LGMN-217ENST00000557609 FAM227BQ96M60 508 aa20.4■□□□□ 0.86
LGMN-217ENST00000557609 CDC5LQ99459 802 aaKnown RBP20.4■□□□□ 0.86
LGMN-217ENST00000557609 LSG1Q9H089 658 aaKnown RBP20.4■□□□□ 0.86
LGMN-217ENST00000557609 UBR3Q6ZT12 1888 aa20.39■□□□□ 0.86
LGMN-217ENST00000557609 HELBQ8NG08 1087 aaPredicted RBP20.39■□□□□ 0.86
LGMN-217ENST00000557609 PAG1Q9NWQ8 432 aa20.39■□□□□ 0.86
LGMN-217ENST00000557609 RFX7Q2KHR2 1363 aa20.39■□□□□ 0.85
LGMN-217ENST00000557609 GOLIM4O00461 696 aa20.39■□□□□ 0.85
LGMN-217ENST00000557609 POTEAQ6S8J7 498 aa20.39■□□□□ 0.85
LGMN-217ENST00000557609 NLRP3Q96P20 1036 aa20.39■□□□□ 0.85
LGMN-217ENST00000557609 RAD50Q92878 1312 aa20.38■□□□□ 0.85
LGMN-217ENST00000557609 NFIXQ14938 502 aa20.38■□□□□ 0.85
LGMN-217ENST00000557609 PUM3Q15397 648 aaKnown RBP20.38■□□□□ 0.85
LGMN-217ENST00000557609 KBTBD3Q8NAB2 608 aa20.38■□□□□ 0.85
LGMN-217ENST00000557609 EP400Q96L91 3159 aa20.38■□□□□ 0.85
LGMN-217ENST00000557609 CARMIL3Q8ND23 1372 aa20.37■□□□□ 0.85
LGMN-217ENST00000557609 A0A0D9SFI3 127 aa20.37■□□□□ 0.85
LGMN-217ENST00000557609 NPHP1O15259 732 aa20.37■□□□□ 0.85
LGMN-217ENST00000557609 GYS1P13807 737 aa20.37■□□□□ 0.85
LGMN-217ENST00000557609 ANAPC15P60006 121 aa20.37■□□□□ 0.85
LGMN-217ENST00000557609 ANKRD18AQ8IVF6 992 aa20.37■□□□□ 0.85
LGMN-217ENST00000557609 CCDC24Q8N4L8 307 aa20.37■□□□□ 0.85
LGMN-217ENST00000557609 LPIN2Q92539 896 aa20.37■□□□□ 0.85
LGMN-217ENST00000557609 PALD1Q9ULE6 856 aa20.37■□□□□ 0.85
LGMN-217ENST00000557609 FGFR2P21802 821 aa20.36■□□□□ 0.85
LGMN-217ENST00000557609 HSPA4P34932 840 aa20.36■□□□□ 0.85
LGMN-217ENST00000557609 SNRKQ9NRH2 765 aa20.36■□□□□ 0.85
LGMN-217ENST00000557609 TAF5LO75529 589 aa20.35■□□□□ 0.85
LGMN-217ENST00000557609 CD2BP2O95400 341 aaKnown RBP20.35■□□□□ 0.85
LGMN-217ENST00000557609 FKBP4Q02790 459 aaKnown RBP eCLIP20.35■□□□□ 0.85
LGMN-217ENST00000557609 SLC5A1P13866 664 aa20.34■□□□□ 0.85
LGMN-217ENST00000557609 PTH1RQ03431 593 aa20.34■□□□□ 0.85
LGMN-217ENST00000557609 CHRNDQ07001 517 aa20.34■□□□□ 0.85
LGMN-217ENST00000557609 SCARF1Q14162 830 aa20.34■□□□□ 0.85
LGMN-217ENST00000557609 COL4A1P02462 1669 aa20.34■□□□□ 0.85
LGMN-217ENST00000557609 MED23Q9ULK4 1368 aa20.34■□□□□ 0.85
LGMN-217ENST00000557609 SPEF2Q9C093 1822 aa20.33■□□□□ 0.85
LGMN-217ENST00000557609 TICAM2Q86XR7 235 aa20.33■□□□□ 0.85
LGMN-217ENST00000557609 CNBD1Q8NA66 436 aa20.33■□□□□ 0.85
LGMN-217ENST00000557609 ZNF512BQ96KM6 892 aaPredicted RBP20.33■□□□□ 0.85
LGMN-217ENST00000557609 ANTXR1Q9H6X2 564 aa20.33■□□□□ 0.85
LGMN-217ENST00000557609 BSDC1Q9NW68 430 aaPredicted RBP20.33■□□□□ 0.85
LGMN-217ENST00000557609 CCDC171Q6TFL3 1326 aa20.33■□□□□ 0.84
LGMN-217ENST00000557609 ZNF827Q17R98 1081 aa20.32■□□□□ 0.84
LGMN-217ENST00000557609 SPRYD3Q8NCJ5 442 aa20.32■□□□□ 0.84
LGMN-217ENST00000557609 CELF1Q92879 486 aaKnown RBP20.32■□□□□ 0.84
LGMN-217ENST00000557609 IL17RAQ96F46 866 aa20.32■□□□□ 0.84
LGMN-217ENST00000557609 TFCP2L1Q9NZI6 479 aa20.32■□□□□ 0.84
LGMN-217ENST00000557609 K7ELQ4 463 aaPredicted RBP20.32■□□□□ 0.84
LGMN-217ENST00000557609 SNAP23O00161 211 aa20.32■□□□□ 0.84
LGMN-217ENST00000557609 ST18O60284 1047 aa20.32■□□□□ 0.84
LGMN-217ENST00000557609 CHGBP05060 677 aa20.32■□□□□ 0.84
LGMN-217ENST00000557609 ZAP70P43403 619 aa20.32■□□□□ 0.84
LGMN-217ENST00000557609 CCDC102BQ68D86 513 aa20.32■□□□□ 0.84
LGMN-217ENST00000557609 AKT1S1Q96B36 256 aa20.32■□□□□ 0.84
LGMN-217ENST00000557609 SLKQ9H2G2 1235 aaPredicted RBP20.32■□□□□ 0.84
LGMN-217ENST00000557609 CASZ1Q86V15 1759 aa20.31■□□□□ 0.84
LGMN-217ENST00000557609 MCAMP43121 646 aa20.31■□□□□ 0.84
LGMN-217ENST00000557609 PHKA1P46020 1223 aa20.31■□□□□ 0.84
LGMN-217ENST00000557609 ZNF589Q86UQ0 364 aaPredicted RBP20.31■□□□□ 0.84
LGMN-217ENST00000557609 UQCRFS1P1P0C7P4 283 aa20.3■□□□□ 0.84
LGMN-217ENST00000557609 TM4SF1P30408 202 aa20.3■□□□□ 0.84
LGMN-217ENST00000557609 MCMDC2Q4G0Z9 681 aa20.3■□□□□ 0.84
LGMN-217ENST00000557609 PRR5LQ6MZQ0 368 aa20.3■□□□□ 0.84
LGMN-217ENST00000557609 PI16Q6UXB8 463 aa20.3■□□□□ 0.84
LGMN-217ENST00000557609 ARID4AP29374 1257 aaPredicted RBP20.3■□□□□ 0.84
LGMN-217ENST00000557609 RPS8P62241 208 aaKnown RBP20.3■□□□□ 0.84
LGMN-217ENST00000557609 MAP4K1Q92918 833 aa20.3■□□□□ 0.84
LGMN-217ENST00000557609 ARAP2Q8WZ64 1704 aa20.29■□□□□ 0.84
LGMN-217ENST00000557609 RNF113AO15541 343 aaKnown RBP20.29■□□□□ 0.84
LGMN-217ENST00000557609 SERPINB2P05120 415 aa20.29■□□□□ 0.84
LGMN-217ENST00000557609 NEK4P51957 841 aa20.29■□□□□ 0.84
LGMN-217ENST00000557609 LRRFIP1Q32MZ4 808 aaKnown RBP20.29■□□□□ 0.84
LGMN-217ENST00000557609 SEC62Q99442 399 aaKnown RBP20.29■□□□□ 0.84
LGMN-217ENST00000557609 HELLSQ9NRZ9 838 aa20.29■□□□□ 0.84
LGMN-217ENST00000557609 MINPP1Q9UNW1 487 aa20.29■□□□□ 0.84
LGMN-217ENST00000557609 RBM8AQ9Y5S9 174 aaKnown RBP20.29■□□□□ 0.84
LGMN-217ENST00000557609 SNX14Q9Y5W7 946 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms