RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CARMIL3Q8ND23 1372 aa15.12■□□□□ 0.01
SHMT2-233ENST00000557529 RAD50Q92878 1312 aa15.12■□□□□ 0.01
SHMT2-233ENST00000557529 PDE8BO95263 885 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 APBA3O96018 575 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 RABEP1Q15276 862 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 KIAA1211Q6ZU35 1233 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 VGLL2Q8N8G2 317 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 KIF2CQ99661 725 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 RGS17Q9UGC6 210 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-233ENST00000557529 UBR3Q6ZT12 1888 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 PUM3Q15397 648 aaKnown RBP15.11■□□□□ 0.01
SHMT2-233ENST00000557529 TTC39AQ5SRH9 613 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 CWC27Q6UX04 472 aaKnown RBP15.11■□□□□ 0.01
SHMT2-233ENST00000557529 PROM2Q8N271 834 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 SNX21Q969T3 373 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 XAGE2Q96GT9 111 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 NLRP3Q96P20 1036 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 SEC31BQ9NQW1 1179 aa15.11■□□□□ 0.01
SHMT2-233ENST00000557529 IFIT1P09914 478 aaKnown RBP15.1■□□□□ 0.01
SHMT2-233ENST00000557529 ANAPC15P60006 121 aa15.1■□□□□ 0.01
SHMT2-233ENST00000557529 NFIXQ14938 502 aa15.1■□□□□ 0.01
SHMT2-233ENST00000557529 POTEAQ6S8J7 498 aa15.1■□□□□ 0.01
SHMT2-233ENST00000557529 ANKRD18AQ8IVF6 992 aa15.1■□□□□ 0.01
SHMT2-233ENST00000557529 HSCBQ8IWL3 235 aa15.1■□□□□ 0.01
SHMT2-233ENST00000557529 DNAJC2Q99543 621 aaKnown RBP15.1■□□□□ 0.01
SHMT2-233ENST00000557529 TBC1D2Q9BYX2 928 aa15.1■□□□□ 0.01
SHMT2-233ENST00000557529 NPHP1O15259 732 aa15.09■□□□□ 0.01
SHMT2-233ENST00000557529 ADORA1P30542 326 aa15.09■□□□□ 0.01
SHMT2-233ENST00000557529 KBTBD3Q8NAB2 608 aa15.09■□□□□ 0.01
SHMT2-233ENST00000557529 IL27Q8NEV9 243 aa15.09■□□□□ 0.01
SHMT2-233ENST00000557529 LPIN2Q92539 896 aa15.09■□□□□ 0.01
SHMT2-233ENST00000557529 ZNF512BQ96KM6 892 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-233ENST00000557529 SNRKQ9NRH2 765 aa15.09■□□□□ 0.01
SHMT2-233ENST00000557529 PAG1Q9NWQ8 432 aa15.09■□□□□ 0.01
SHMT2-233ENST00000557529 GYS1P13807 737 aa15.08■□□□□ 0
SHMT2-233ENST00000557529 SLC5A1P13866 664 aa15.08■□□□□ 0
SHMT2-233ENST00000557529 SLC4A3P48751 1232 aa15.08■□□□□ 0
SHMT2-233ENST00000557529 NMIQ13287 307 aaPredicted RBP15.08■□□□□ 0
SHMT2-233ENST00000557529 LRRFIP1Q32MZ4 808 aaKnown RBP15.08■□□□□ 0
SHMT2-233ENST00000557529 FLAD1Q8NFF5 587 aa15.08■□□□□ 0
SHMT2-233ENST00000557529 SPEF2Q9C093 1822 aa15.07■□□□□ 0
SHMT2-233ENST00000557529 FGFR2P21802 821 aa15.07■□□□□ 0
SHMT2-233ENST00000557529 C3orf67Q6ZVT6 689 aa15.07■□□□□ 0
SHMT2-233ENST00000557529 CNBD1Q8NA66 436 aa15.07■□□□□ 0
SHMT2-233ENST00000557529 IL17RAQ96F46 866 aa15.07■□□□□ 0
SHMT2-233ENST00000557529 LSG1Q9H089 658 aaKnown RBP15.07■□□□□ 0
SHMT2-233ENST00000557529 IL25Q9H293 177 aa15.07■□□□□ 0
SHMT2-233ENST00000557529 BSDC1Q9NW68 430 aaPredicted RBP15.07■□□□□ 0
SHMT2-233ENST00000557529 GOLIM4O00461 696 aa15.06■□□□□ 0
SHMT2-233ENST00000557529 UQCRFS1P1P0C7P4 283 aa15.06■□□□□ 0
SHMT2-233ENST00000557529 HSPA4P34932 840 aa15.06■□□□□ 0
SHMT2-233ENST00000557529 DDX46Q7L014 1031 aaKnown RBP15.06■□□□□ 0
SHMT2-233ENST00000557529 AKT1S1Q96B36 256 aa15.06■□□□□ 0
SHMT2-233ENST00000557529 EDC3Q96F86 508 aaKnown RBP15.06■□□□□ 0
SHMT2-233ENST00000557529 TFCP2L1Q9NZI6 479 aa15.06■□□□□ 0
SHMT2-233ENST00000557529 RGPD3A6NKT7 1758 aaPredicted RBP15.05■□□□□ 0
SHMT2-233ENST00000557529 RGPD4Q7Z3J3 1758 aa15.05■□□□□ 0
SHMT2-233ENST00000557529 CHRNDQ07001 517 aa15.05■□□□□ -0
SHMT2-233ENST00000557529 FAM227BQ96M60 508 aa15.05■□□□□ -0
SHMT2-233ENST00000557529 A0A0D9SFI3 127 aa15.04■□□□□ -0
SHMT2-233ENST00000557529 ST18O60284 1047 aa15.04■□□□□ -0
SHMT2-233ENST00000557529 ARID4AP29374 1257 aaPredicted RBP15.04■□□□□ -0
SHMT2-233ENST00000557529 TM4SF1P30408 202 aa15.04■□□□□ -0
SHMT2-233ENST00000557529 RPS8P62241 208 aaKnown RBP15.04■□□□□ -0
SHMT2-233ENST00000557529 ST5P78524 1137 aa15.04■□□□□ -0
SHMT2-233ENST00000557529 HELBQ8NG08 1087 aaPredicted RBP15.04■□□□□ -0
SHMT2-233ENST00000557529 NDUFB9Q9Y6M9 179 aa15.04■□□□□ -0
SHMT2-233ENST00000557529 MED23Q9ULK4 1368 aa15.04■□□□□ -0
SHMT2-233ENST00000557529 TNS1Q9HBL0 1735 aaKnown RBP15.04■□□□□ -0
SHMT2-233ENST00000557529 CCDC171Q6TFL3 1326 aa15.03■□□□□ -0
SHMT2-233ENST00000557529 SERPINB2P05120 415 aa15.03■□□□□ -0
SHMT2-233ENST00000557529 ZFYP08048 801 aaPredicted RBP15.03■□□□□ -0
SHMT2-233ENST00000557529 FKBP4Q02790 459 aaKnown RBP eCLIP15.03■□□□□ -0
SHMT2-233ENST00000557529 TTF1Q15361 905 aaPredicted RBP15.03■□□□□ -0
SHMT2-233ENST00000557529 ZNF827Q17R98 1081 aa15.03■□□□□ -0
SHMT2-233ENST00000557529 CCDC102BQ68D86 513 aa15.03■□□□□ -0
SHMT2-233ENST00000557529 PRR5LQ6MZQ0 368 aa15.03■□□□□ -0
SHMT2-233ENST00000557529 HELLSQ9NRZ9 838 aa15.03■□□□□ -0
SHMT2-233ENST00000557529 ARAP2Q8WZ64 1704 aa15.03■□□□□ -0
SHMT2-233ENST00000557529 RNF113AO15541 343 aaKnown RBP15.02■□□□□ -0
SHMT2-233ENST00000557529 TAF5LO75529 589 aa15.02■□□□□ -0
SHMT2-233ENST00000557529 UBE4AQ14139 1066 aa15.02■□□□□ -0
SHMT2-233ENST00000557529 MCMDC2Q4G0Z9 681 aa15.02■□□□□ -0
SHMT2-233ENST00000557529 NLGN1Q8N2Q7 840 aa15.02■□□□□ -0
SHMT2-233ENST00000557529 CELF1Q92879 486 aaKnown RBP15.02■□□□□ -0
SHMT2-233ENST00000557529 ANKRD2Q9GZV1 360 aa15.02■□□□□ -0
SHMT2-233ENST00000557529 K7ELQ4 463 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-233ENST00000557529 ZAP70P43403 619 aa15.01□□□□□ -0.01
SHMT2-233ENST00000557529 PHKA1P46020 1223 aa15.01□□□□□ -0.01
SHMT2-233ENST00000557529 ZSCAN25Q6NSZ9 544 aa15.01□□□□□ -0.01
SHMT2-233ENST00000557529 MAP4K1Q92918 833 aa15.01□□□□□ -0.01
SHMT2-233ENST00000557529 PALD1Q9ULE6 856 aa15.01□□□□□ -0.01
SHMT2-233ENST00000557529 MINPP1Q9UNW1 487 aa15.01□□□□□ -0.01
SHMT2-233ENST00000557529 MCAMP43121 646 aa15□□□□□ -0.01
SHMT2-233ENST00000557529 KCNJ4P48050 445 aa15□□□□□ -0.01
SHMT2-233ENST00000557529 PTH1RQ03431 593 aa15□□□□□ -0.01
SHMT2-233ENST00000557529 SCARF1Q14162 830 aa15□□□□□ -0.01
SHMT2-233ENST00000557529 ZMYM1Q5SVZ6 1142 aa15□□□□□ -0.01
SHMT2-233ENST00000557529 CCDC24Q8N4L8 307 aa15□□□□□ -0.01
SHMT2-233ENST00000557529 KCNB2Q92953 911 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms