RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 HUNKP57058 714 aa18.31■□□□□ 0.52
SLIRP-210ENST00000557431 TMC4Q7Z404 712 aa18.31■□□□□ 0.52
SLIRP-210ENST00000557431 RIC3Q7Z5B4 369 aa18.31■□□□□ 0.52
SLIRP-210ENST00000557431 ZC3H15Q8WU90 426 aaKnown RBP18.31■□□□□ 0.52
SLIRP-210ENST00000557431 CFAP44Q96MT7 982 aa18.31■□□□□ 0.52
SLIRP-210ENST00000557431 MYD88Q99836 296 aa18.31■□□□□ 0.52
SLIRP-210ENST00000557431 HOXB7P09629 217 aa18.3■□□□□ 0.52
SLIRP-210ENST00000557431 TBC1D16Q8TBP0 767 aa18.3■□□□□ 0.52
SLIRP-210ENST00000557431 HYPKQ9NX55 129 aa18.3■□□□□ 0.52
SLIRP-210ENST00000557431 RPS8P62241 208 aaKnown RBP18.29■□□□□ 0.52
SLIRP-210ENST00000557431 KRT26Q7Z3Y9 468 aa18.29■□□□□ 0.52
SLIRP-210ENST00000557431 MCOLN1Q9GZU1 580 aa18.29■□□□□ 0.52
SLIRP-210ENST00000557431 APAF1O14727 1248 aa18.28■□□□□ 0.52
SLIRP-210ENST00000557431 UFL1O94874 794 aa18.28■□□□□ 0.52
SLIRP-210ENST00000557431 DPF2Q92785 391 aa18.28■□□□□ 0.52
SLIRP-210ENST00000557431 ZNF853P0CG23 659 aa18.27■□□□□ 0.52
SLIRP-210ENST00000557431 BRPF1P55201 1214 aaPredicted RBP18.27■□□□□ 0.52
SLIRP-210ENST00000557431 GOLGA2Q08379 1002 aa18.27■□□□□ 0.52
SLIRP-210ENST00000557431 KIF4BQ2VIQ3 1234 aa18.27■□□□□ 0.52
SLIRP-210ENST00000557431 HHIPL1Q96JK4 782 aa18.27■□□□□ 0.52
SLIRP-210ENST00000557431 EYA3Q99504 573 aa18.27■□□□□ 0.52
SLIRP-210ENST00000557431 GBA2Q9HCG7 927 aaPredicted RBP18.27■□□□□ 0.52
SLIRP-210ENST00000557431 GGA3Q9NZ52 723 aa18.27■□□□□ 0.52
SLIRP-210ENST00000557431 SCAF8Q9UPN6 1271 aaKnown RBP18.27■□□□□ 0.52
SLIRP-210ENST00000557431 WTIPA6NIX2 430 aaPredicted RBP18.26■□□□□ 0.51
SLIRP-210ENST00000557431 ZBTB38Q8NAP3 1195 aaPredicted RBP18.26■□□□□ 0.51
SLIRP-210ENST00000557431 C8orf58Q8NAV2 365 aa18.26■□□□□ 0.51
SLIRP-210ENST00000557431 ANKIB1Q9P2G1 1089 aa18.26■□□□□ 0.51
SLIRP-210ENST00000557431 A0A1B0GUL6 1792 aa18.26■□□□□ 0.51
SLIRP-210ENST00000557431 FAM155AB1AL88 458 aaPredicted RBP18.25■□□□□ 0.51
SLIRP-210ENST00000557431 TRIM28Q13263 835 aaKnown RBP18.25■□□□□ 0.51
SLIRP-210ENST00000557431 DGKZQ13574 1117 aa18.25■□□□□ 0.51
SLIRP-210ENST00000557431 DCPSQ96C86 337 aaKnown RBP18.25■□□□□ 0.51
SLIRP-210ENST00000557431 ZC3H12CQ9C0D7 883 aaKnown RBP18.25■□□□□ 0.51
SLIRP-210ENST00000557431 G3V3G9 751 aa18.24■□□□□ 0.51
SLIRP-210ENST00000557431 NOGQ13253 232 aa18.24■□□□□ 0.51
SLIRP-210ENST00000557431 DCAF8Q5TAQ9 597 aa18.24■□□□□ 0.51
SLIRP-210ENST00000557431 RGMBQ6NW40 437 aa18.24■□□□□ 0.51
SLIRP-210ENST00000557431 GGA1Q9UJY5 639 aa18.24■□□□□ 0.51
SLIRP-210ENST00000557431 VIL1P09327 827 aaKnown RBP18.23■□□□□ 0.51
SLIRP-210ENST00000557431 RPS12P25398 132 aaKnown RBP18.23■□□□□ 0.51
SLIRP-210ENST00000557431 KIF23Q02241 960 aaPredicted RBP18.23■□□□□ 0.51
SLIRP-210ENST00000557431 TSPYL6Q8N831 410 aa18.23■□□□□ 0.51
SLIRP-210ENST00000557431 PRKRIP1Q9H875 184 aaPredicted RBP18.23■□□□□ 0.51
SLIRP-210ENST00000557431 IFT57Q9NWB7 429 aa18.23■□□□□ 0.51
SLIRP-210ENST00000557431 PODXL2Q9NZ53 605 aa18.23■□□□□ 0.51
SLIRP-210ENST00000557431 PDE8AO60658 829 aa18.22■□□□□ 0.51
SLIRP-210ENST00000557431 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
SLIRP-210ENST00000557431 CCDC152Q4G0S7 254 aa18.22■□□□□ 0.51
SLIRP-210ENST00000557431 C2orf69Q8N8R5 385 aa18.22■□□□□ 0.51
SLIRP-210ENST00000557431 CDCA5Q96FF9 252 aa18.22■□□□□ 0.51
SLIRP-210ENST00000557431 CWC25Q9NXE8 425 aaPredicted RBP18.22■□□□□ 0.51
SLIRP-210ENST00000557431 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
SLIRP-210ENST00000557431 PAPPA2Q9BXP8 1791 aa18.22■□□□□ 0.51
SLIRP-210ENST00000557431 CA12O43570 354 aa18.21■□□□□ 0.51
SLIRP-210ENST00000557431 ZNF157P51786 506 aaPredicted RBP18.21■□□□□ 0.51
SLIRP-210ENST00000557431 GNAI1P63096 354 aa18.21■□□□□ 0.51
SLIRP-210ENST00000557431 ANGEL2Q5VTE6 544 aaKnown RBP18.21■□□□□ 0.51
SLIRP-210ENST00000557431 CCDC191Q8NCU4 936 aa18.21■□□□□ 0.51
SLIRP-210ENST00000557431 METTL22Q9BUU2 404 aaPredicted RBP18.21■□□□□ 0.51
SLIRP-210ENST00000557431 MXD3Q9BW11 206 aa18.21■□□□□ 0.51
SLIRP-210ENST00000557431 MAP3K2Q9Y2U5 619 aa18.21■□□□□ 0.51
SLIRP-210ENST00000557431 MLLT1Q03111 559 aaPredicted RBP18.2■□□□□ 0.5
SLIRP-210ENST00000557431 SCARF1Q14162 830 aa18.2■□□□□ 0.5
SLIRP-210ENST00000557431 RSBN1LQ6PCB5 846 aaPredicted RBP18.2■□□□□ 0.5
SLIRP-210ENST00000557431 MOB2Q70IA6 237 aa18.2■□□□□ 0.5
SLIRP-210ENST00000557431 SULF1Q8IWU6 871 aa18.2■□□□□ 0.5
SLIRP-210ENST00000557431 TSR2Q969E8 191 aaKnown RBP18.2■□□□□ 0.5
SLIRP-210ENST00000557431 ECM29Q5VYK3 1845 aa18.19■□□□□ 0.5
SLIRP-210ENST00000557431 PRAMEF18Q5VWM3 479 aa18.19■□□□□ 0.5
SLIRP-210ENST00000557431 ANKRD18AQ8IVF6 992 aa18.19■□□□□ 0.5
SLIRP-210ENST00000557431 XDHP47989 1333 aa18.19■□□□□ 0.5
SLIRP-210ENST00000557431 TRPA1O75762 1119 aa18.18■□□□□ 0.5
SLIRP-210ENST00000557431 IGKV5-2P06315 115 aa18.18■□□□□ 0.5
SLIRP-210ENST00000557431 SLC10A3P09131 477 aa18.18■□□□□ 0.5
SLIRP-210ENST00000557431 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
SLIRP-210ENST00000557431 CCDC184Q52MB2 194 aa18.18■□□□□ 0.5
SLIRP-210ENST00000557431 FBXW7Q969H0 707 aa18.18■□□□□ 0.5
SLIRP-210ENST00000557431 CTSWP56202 376 aa18.17■□□□□ 0.5
SLIRP-210ENST00000557431 ZNF280AP59817 542 aaPredicted RBP18.17■□□□□ 0.5
SLIRP-210ENST00000557431 G2E3Q7L622 706 aa18.17■□□□□ 0.5
SLIRP-210ENST00000557431 GREM2Q9H772 168 aa18.17■□□□□ 0.5
SLIRP-210ENST00000557431 RNF186Q9NXI6 227 aa18.17■□□□□ 0.5
SLIRP-210ENST00000557431 PI4KAP2A4QPH2 592 aa18.16■□□□□ 0.5
SLIRP-210ENST00000557431 CCDC30Q5VVM6 783 aa18.16■□□□□ 0.5
SLIRP-210ENST00000557431 RASAL3Q86YV0 1011 aa18.16■□□□□ 0.5
SLIRP-210ENST00000557431 PI4KAP1Q8N8J0 262 aa18.16■□□□□ 0.5
SLIRP-210ENST00000557431 AGBL3Q8NEM8 1001 aa18.16■□□□□ 0.5
SLIRP-210ENST00000557431 CSRNP1Q96S65 589 aa18.16■□□□□ 0.5
SLIRP-210ENST00000557431 GMLQ99445 158 aa18.16■□□□□ 0.5
SLIRP-210ENST00000557431 MYOZ2Q9NPC6 264 aa18.16■□□□□ 0.5
SLIRP-210ENST00000557431 PDE4DIPQ5VU43 2346 aa18.16■□□□□ 0.5
SLIRP-210ENST00000557431 ZNF609O15014 1411 aa18.15■□□□□ 0.5
SLIRP-210ENST00000557431 DDX58O95786 925 aaKnown RBP18.15■□□□□ 0.5
SLIRP-210ENST00000557431 ATP2B4P23634 1241 aa18.15■□□□□ 0.5
SLIRP-210ENST00000557431 RGS19P49795 217 aa18.15■□□□□ 0.5
SLIRP-210ENST00000557431 NBPF9Q3BBW0 867 aa18.15■□□□□ 0.5
SLIRP-210ENST00000557431 TXNRD3Q86VQ6 643 aa18.15■□□□□ 0.5
SLIRP-210ENST00000557431 TTLL11Q8NHH1 800 aa18.15■□□□□ 0.5
SLIRP-210ENST00000557431 CCDC102AQ96A19 550 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms