RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 SCN4AP35499 1836 aa17.4■□□□□ 0.38
VPS33B-206ENST00000557358 CASP7P55210 303 aa17.4■□□□□ 0.38
VPS33B-206ENST00000557358 FAM161AQ3B820 660 aa17.4■□□□□ 0.38
VPS33B-206ENST00000557358 PNMA8AQ86V59 439 aaPredicted RBP17.4■□□□□ 0.38
VPS33B-206ENST00000557358 ANKRD2Q9GZV1 360 aa17.4■□□□□ 0.38
VPS33B-206ENST00000557358 RIMBP2O15034 1052 aa17.39■□□□□ 0.37
VPS33B-206ENST00000557358 CSF1RP07333 972 aa17.39■□□□□ 0.37
VPS33B-206ENST00000557358 HSPA6P17066 643 aa17.39■□□□□ 0.37
VPS33B-206ENST00000557358 CCT4P50991 539 aaKnown RBP17.39■□□□□ 0.37
VPS33B-206ENST00000557358 BRPF1P55201 1214 aaPredicted RBP17.39■□□□□ 0.37
VPS33B-206ENST00000557358 CIAPIN1Q6FI81 312 aa17.39■□□□□ 0.37
VPS33B-206ENST00000557358 TBC1D16Q8TBP0 767 aa17.39■□□□□ 0.37
VPS33B-206ENST00000557358 ZBED9Q6R2W3 1325 aa17.39■□□□□ 0.37
VPS33B-206ENST00000557358 KCNJ4P48050 445 aa17.38■□□□□ 0.37
VPS33B-206ENST00000557358 LMBR1LQ6UX01 489 aa17.38■□□□□ 0.37
VPS33B-206ENST00000557358 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
VPS33B-206ENST00000557358 NOB1Q9ULX3 412 aaKnown RBP17.38■□□□□ 0.37
VPS33B-206ENST00000557358 RARSP54136 660 aaKnown RBP17.37■□□□□ 0.37
VPS33B-206ENST00000557358 EAPPQ56P03 285 aaPredicted RBP17.37■□□□□ 0.37
VPS33B-206ENST00000557358 TAF1DQ9H5J8 278 aaPredicted RBP17.37■□□□□ 0.37
VPS33B-206ENST00000557358 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
VPS33B-206ENST00000557358 EPHX2P34913 555 aa17.36■□□□□ 0.37
VPS33B-206ENST00000557358 APLP1P51693 650 aa17.36■□□□□ 0.37
VPS33B-206ENST00000557358 SLC51AQ86UW1 340 aa17.36■□□□□ 0.37
VPS33B-206ENST00000557358 LDHDQ86WU2 507 aa17.36■□□□□ 0.37
VPS33B-206ENST00000557358 ARHGAP45Q92619 1136 aa17.36■□□□□ 0.37
VPS33B-206ENST00000557358 MINPP1Q9UNW1 487 aa17.36■□□□□ 0.37
VPS33B-206ENST00000557358 LEMD3Q9Y2U8 911 aa17.36■□□□□ 0.37
VPS33B-206ENST00000557358 POTECB2RU33 542 aa17.35■□□□□ 0.37
VPS33B-206ENST00000557358 ECE2O60344 883 aa17.35■□□□□ 0.37
VPS33B-206ENST00000557358 RAD17O75943 681 aa17.35■□□□□ 0.37
VPS33B-206ENST00000557358 FOXO4P98177 505 aa17.35■□□□□ 0.37
VPS33B-206ENST00000557358 CXCL9Q07325 125 aa17.35■□□□□ 0.37
VPS33B-206ENST00000557358 CHADLQ6NUI6 762 aa17.35■□□□□ 0.37
VPS33B-206ENST00000557358 DBNDD1Q9H9R9 158 aa17.35■□□□□ 0.37
VPS33B-206ENST00000557358 CNNM1Q9NRU3 951 aa17.35■□□□□ 0.37
VPS33B-206ENST00000557358 SPEF2Q9C093 1822 aa17.35■□□□□ 0.37
VPS33B-206ENST00000557358 UTYO14607 1347 aa17.34■□□□□ 0.37
VPS33B-206ENST00000557358 LDHAL6AQ6ZMR3 332 aa17.34■□□□□ 0.37
VPS33B-206ENST00000557358 H7C1D1 291 aa17.33■□□□□ 0.36
VPS33B-206ENST00000557358 NBPF7P0C2Y1 421 aaPredicted RBP17.33■□□□□ 0.36
VPS33B-206ENST00000557358 UBTFL1P0CB47 393 aaPredicted RBP17.33■□□□□ 0.36
VPS33B-206ENST00000557358 DOK7Q18PE1 504 aa17.33■□□□□ 0.36
VPS33B-206ENST00000557358 FRAT1Q92837 279 aaPredicted RBP17.33■□□□□ 0.36
VPS33B-206ENST00000557358 SUCLG2Q96I99 432 aa17.33■□□□□ 0.36
VPS33B-206ENST00000557358 DUOX1Q9NRD9 1551 aa17.32■□□□□ 0.36
VPS33B-206ENST00000557358 RPS12P25398 132 aaKnown RBP17.32■□□□□ 0.36
VPS33B-206ENST00000557358 USP50Q70EL3 339 aaPredicted RBP17.32■□□□□ 0.36
VPS33B-206ENST00000557358 COL4A5P29400 1685 aa17.32■□□□□ 0.36
VPS33B-206ENST00000557358 MED23Q9ULK4 1368 aa17.31■□□□□ 0.36
VPS33B-206ENST00000557358 ZNF804BA4D1E1 1349 aa17.31■□□□□ 0.36
VPS33B-206ENST00000557358 GMPSP49915 693 aaPredicted RBP17.31■□□□□ 0.36
VPS33B-206ENST00000557358 CHRNDQ07001 517 aa17.31■□□□□ 0.36
VPS33B-206ENST00000557358 PODNQ7Z5L7 613 aa17.31■□□□□ 0.36
VPS33B-206ENST00000557358 ADARB2Q9NS39 739 aaKnown RBP17.31■□□□□ 0.36
VPS33B-206ENST00000557358 GPRC5DQ9NZD1 345 aa17.31■□□□□ 0.36
VPS33B-206ENST00000557358 SCNN1DP51172 638 aa17.3■□□□□ 0.36
VPS33B-206ENST00000557358 EPHA10Q5JZY3 1008 aa17.3■□□□□ 0.36
VPS33B-206ENST00000557358 DPF2Q92785 391 aa17.3■□□□□ 0.36
VPS33B-206ENST00000557358 GPR101Q96P66 508 aaPredicted RBP17.3■□□□□ 0.36
VPS33B-206ENST00000557358 USP44Q9H0E7 712 aa17.3■□□□□ 0.36
VPS33B-206ENST00000557358 BICC1Q9H694 974 aaKnown RBP17.3■□□□□ 0.36
VPS33B-206ENST00000557358 LTBP1Q14766 1721 aa17.3■□□□□ 0.36
VPS33B-206ENST00000557358 COL4A1P02462 1669 aa17.29■□□□□ 0.36
VPS33B-206ENST00000557358 YDJCA8MPS7 323 aa17.29■□□□□ 0.36
VPS33B-206ENST00000557358 PSMD14O00487 310 aa17.29■□□□□ 0.36
VPS33B-206ENST00000557358 GNAI3P08754 354 aa17.29■□□□□ 0.36
VPS33B-206ENST00000557358 EPS15P42566 896 aa17.29■□□□□ 0.36
VPS33B-206ENST00000557358 ZKSCAN2Q63HK3 967 aa17.29■□□□□ 0.36
VPS33B-206ENST00000557358 ATF7IPQ6VMQ6 1270 aa17.29■□□□□ 0.36
VPS33B-206ENST00000557358 COA1Q9GZY4 146 aa17.29■□□□□ 0.36
VPS33B-206ENST00000557358 PLIN1O60240 522 aa17.28■□□□□ 0.36
VPS33B-206ENST00000557358 RABL6Q3YEC7 729 aaPredicted RBP17.28■□□□□ 0.36
VPS33B-206ENST00000557358 FTSJ3Q8IY81 847 aaKnown RBP17.28■□□□□ 0.36
VPS33B-206ENST00000557358 CNOT7Q9UIV1 285 aaKnown RBP17.28■□□□□ 0.36
VPS33B-206ENST00000557358 MROH5Q6ZUA9 1318 aa17.27■□□□□ 0.36
VPS33B-206ENST00000557358 USP17L3A6NCW0 530 aa17.27■□□□□ 0.36
VPS33B-206ENST00000557358 USP17L4A6NCW7 530 aa17.27■□□□□ 0.36
VPS33B-206ENST00000557358 BCAR3O75815 825 aa17.27■□□□□ 0.36
VPS33B-206ENST00000557358 USP17L1Q7RTZ2 530 aa17.27■□□□□ 0.36
VPS33B-206ENST00000557358 ZNF804AQ7Z570 1209 aa17.27■□□□□ 0.36
VPS33B-206ENST00000557358 FBXW7Q969H0 707 aa17.27■□□□□ 0.36
VPS33B-206ENST00000557358 ZNF594Q96JF6 807 aaPredicted RBP17.27■□□□□ 0.36
VPS33B-206ENST00000557358 VIL1P09327 827 aaKnown RBP17.26■□□□□ 0.35
VPS33B-206ENST00000557358 INTS3Q68E01 1043 aaKnown RBP17.26■□□□□ 0.35
VPS33B-206ENST00000557358 MICALL2Q8IY33 904 aa17.26■□□□□ 0.35
VPS33B-206ENST00000557358 AGBL3Q8NEM8 1001 aa17.26■□□□□ 0.35
VPS33B-206ENST00000557358 YTHDC1Q96MU7 727 aaKnown RBP17.26■□□□□ 0.35
VPS33B-206ENST00000557358 MYO3BQ8WXR4 1341 aa17.25■□□□□ 0.35
VPS33B-206ENST00000557358 TAF5LO75529 589 aa17.25■□□□□ 0.35
VPS33B-206ENST00000557358 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
VPS33B-206ENST00000557358 POTEJP0CG39 1038 aa17.25■□□□□ 0.35
VPS33B-206ENST00000557358 MS4A1P11836 297 aa17.25■□□□□ 0.35
VPS33B-206ENST00000557358 TRIM27P14373 513 aa17.25■□□□□ 0.35
VPS33B-206ENST00000557358 METTL24Q5JXM2 366 aa17.25■□□□□ 0.35
VPS33B-206ENST00000557358 RSBN1LQ6PCB5 846 aaPredicted RBP17.25■□□□□ 0.35
VPS33B-206ENST00000557358 CNTROBQ8N137 903 aa17.25■□□□□ 0.35
VPS33B-206ENST00000557358 HELBQ8NG08 1087 aaPredicted RBP17.25■□□□□ 0.35
VPS33B-206ENST00000557358 KAZALD1Q96I82 304 aa17.25■□□□□ 0.35
VPS33B-206ENST00000557358 ZBTB12Q9Y330 459 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms