RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 POLLQ9UGP5 575 aa15.11■□□□□ 0.01
SYNE2-226ENST00000557084 CHMP3Q9Y3E7 222 aa15.11■□□□□ 0.01
SYNE2-226ENST00000557084 RAD17O75943 681 aa15.1■□□□□ 0.01
SYNE2-226ENST00000557084 CXCL9Q07325 125 aa15.1■□□□□ 0.01
SYNE2-226ENST00000557084 CIAPIN1Q6FI81 312 aa15.1■□□□□ 0.01
SYNE2-226ENST00000557084 LDHDQ86WU2 507 aa15.1■□□□□ 0.01
SYNE2-226ENST00000557084 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
SYNE2-226ENST00000557084 TBC1D16Q8TBP0 767 aa15.1■□□□□ 0.01
SYNE2-226ENST00000557084 SSH1Q8WYL5 1049 aa15.1■□□□□ 0.01
SYNE2-226ENST00000557084 MPHOSPH8Q99549 860 aa15.1■□□□□ 0.01
SYNE2-226ENST00000557084 PLA2G12BQ9BX93 195 aa15.1■□□□□ 0.01
SYNE2-226ENST00000557084 BCL2L13Q9BXK5 485 aa15.1■□□□□ 0.01
SYNE2-226ENST00000557084 SMC4Q9NTJ3 1288 aa15.1■□□□□ 0.01
SYNE2-226ENST00000557084 TAF1P21675 1872 aa15.1■□□□□ 0.01
SYNE2-226ENST00000557084 GRM8O00222 908 aa15.09■□□□□ 0.01
SYNE2-226ENST00000557084 ALDH1L1O75891 902 aa15.09■□□□□ 0.01
SYNE2-226ENST00000557084 ITGA6P23229 1130 aa15.09■□□□□ 0.01
SYNE2-226ENST00000557084 BSDC1Q9NW68 430 aaPredicted RBP15.09■□□□□ 0.01
SYNE2-226ENST00000557084 PODXL2Q9NZ53 605 aa15.09■□□□□ 0.01
SYNE2-226ENST00000557084 PTPRCP08575 1304 aa15.09■□□□□ 0.01
SYNE2-226ENST00000557084 XDHP47989 1333 aa15.09■□□□□ 0.01
SYNE2-226ENST00000557084 ANKRD18BA2A2Z9 1011 aa15.08■□□□□ 0
SYNE2-226ENST00000557084 CT47B1P0C2W7 299 aaPredicted RBP15.08■□□□□ 0
SYNE2-226ENST00000557084 DSG3P32926 999 aa15.08■□□□□ 0
SYNE2-226ENST00000557084 DOK7Q18PE1 504 aa15.08■□□□□ 0
SYNE2-226ENST00000557084 FAM161AQ3B820 660 aa15.08■□□□□ 0
SYNE2-226ENST00000557084 ALDH1L2Q3SY69 923 aa15.08■□□□□ 0
SYNE2-226ENST00000557084 GPR101Q96P66 508 aaPredicted RBP15.08■□□□□ 0
SYNE2-226ENST00000557084 DBNDD1Q9H9R9 158 aa15.08■□□□□ 0
SYNE2-226ENST00000557084 COL4A5P29400 1685 aa15.08■□□□□ 0
SYNE2-226ENST00000557084 RTL9Q8NET4 1388 aa15.08■□□□□ 0
SYNE2-226ENST00000557084 ECE2O60344 883 aa15.07■□□□□ 0
SYNE2-226ENST00000557084 POTEIP0CG38 1075 aa15.07■□□□□ 0
SYNE2-226ENST00000557084 POTEJP0CG39 1038 aa15.07■□□□□ 0
SYNE2-226ENST00000557084 ATP2B4P23634 1241 aa15.07■□□□□ 0
SYNE2-226ENST00000557084 GMPSP49915 693 aaPredicted RBP15.07■□□□□ 0
SYNE2-226ENST00000557084 CASP7P55210 303 aa15.07■□□□□ 0
SYNE2-226ENST00000557084 IFIT5Q13325 482 aaKnown RBP15.07■□□□□ 0
SYNE2-226ENST00000557084 TAF7LQ5H9L4 462 aa15.07■□□□□ 0
SYNE2-226ENST00000557084 ABCB7O75027 752 aa15.06■□□□□ 0
SYNE2-226ENST00000557084 CSF1RP07333 972 aa15.06■□□□□ 0
SYNE2-226ENST00000557084 EPS15P42566 896 aa15.06■□□□□ 0
SYNE2-226ENST00000557084 SCNN1DP51172 638 aa15.06■□□□□ 0
SYNE2-226ENST00000557084 HNRNPUQ00839 825 aaKnown RBP eCLIP15.06■□□□□ 0
SYNE2-226ENST00000557084 TRMT2AQ8IZ69 625 aaKnown RBP15.06■□□□□ 0
SYNE2-226ENST00000557084 ANKRD2Q9GZV1 360 aa15.06■□□□□ 0
SYNE2-226ENST00000557084 MINPP1Q9UNW1 487 aa15.06■□□□□ 0
SYNE2-226ENST00000557084 SCN4AP35499 1836 aa15.06■□□□□ 0
SYNE2-226ENST00000557084 KCNJ4P48050 445 aa15.05■□□□□ -0
SYNE2-226ENST00000557084 HTRA3P83110 453 aa15.05■□□□□ -0
SYNE2-226ENST00000557084 CCDC57Q2TAC2 916 aa15.05■□□□□ -0
SYNE2-226ENST00000557084 LMBR1LQ6UX01 489 aa15.05■□□□□ -0
SYNE2-226ENST00000557084 USP50Q70EL3 339 aaPredicted RBP15.05■□□□□ -0
SYNE2-226ENST00000557084 ADARB2Q9NS39 739 aaKnown RBP15.05■□□□□ -0
SYNE2-226ENST00000557084 GPRC5DQ9NZD1 345 aa15.05■□□□□ -0
SYNE2-226ENST00000557084 LRRC37AA6NMS7 1700 aa15.04■□□□□ -0
SYNE2-226ENST00000557084 YDJCA8MPS7 323 aa15.04■□□□□ -0
SYNE2-226ENST00000557084 H7C1D1 291 aa15.04■□□□□ -0
SYNE2-226ENST00000557084 PSMD14O00487 310 aa15.04■□□□□ -0
SYNE2-226ENST00000557084 FOXO4P98177 505 aa15.04■□□□□ -0
SYNE2-226ENST00000557084 DUOX1Q9NRD9 1551 aa15.03■□□□□ -0
SYNE2-226ENST00000557084 CCT4P50991 539 aaKnown RBP15.03■□□□□ -0
SYNE2-226ENST00000557084 MAP1SQ66K74 1059 aaPredicted RBP15.03■□□□□ -0
SYNE2-226ENST00000557084 CNTROBQ8N137 903 aa15.03■□□□□ -0
SYNE2-226ENST00000557084 CNOT7Q9UIV1 285 aaKnown RBP15.03■□□□□ -0
SYNE2-226ENST00000557084 LEMD3Q9Y2U8 911 aa15.03■□□□□ -0
SYNE2-226ENST00000557084 COL4A1P02462 1669 aa15.03■□□□□ -0
SYNE2-226ENST00000557084 RPS12P25398 132 aaKnown RBP15.02■□□□□ -0
SYNE2-226ENST00000557084 CNNM1Q9NRU3 951 aa15.02■□□□□ -0
SYNE2-226ENST00000557084 NOB1Q9ULX3 412 aaKnown RBP15.02■□□□□ -0
SYNE2-226ENST00000557084 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
SYNE2-226ENST00000557084 MYH3P11055 1940 aa15.02□□□□□ -0.01
SYNE2-226ENST00000557084 ZNF804BA4D1E1 1349 aa15.01□□□□□ -0.01
SYNE2-226ENST00000557084 NBPF7P0C2Y1 421 aaPredicted RBP15.01□□□□□ -0.01
SYNE2-226ENST00000557084 EPHA10Q5JZY3 1008 aa15.01□□□□□ -0.01
SYNE2-226ENST00000557084 LDHAL6AQ6ZMR3 332 aa15.01□□□□□ -0.01
SYNE2-226ENST00000557084 MICALL2Q8IY33 904 aa15.01□□□□□ -0.01
SYNE2-226ENST00000557084 DPF2Q92785 391 aa15.01□□□□□ -0.01
SYNE2-226ENST00000557084 SUCLG2Q96I99 432 aa15.01□□□□□ -0.01
SYNE2-226ENST00000557084 API5Q9BZZ5 524 aaKnown RBP15.01□□□□□ -0.01
SYNE2-226ENST00000557084 KCNQ5Q9NR82 932 aa15.01□□□□□ -0.01
SYNE2-226ENST00000557084 RARSP54136 660 aaKnown RBP15□□□□□ -0.01
SYNE2-226ENST00000557084 CHRNDQ07001 517 aa15□□□□□ -0.01
SYNE2-226ENST00000557084 PODNQ7Z5L7 613 aa15□□□□□ -0.01
SYNE2-226ENST00000557084 DNAJC5GQ8N7S2 189 aa15□□□□□ -0.01
SYNE2-226ENST00000557084 FBXW7Q969H0 707 aa15□□□□□ -0.01
SYNE2-226ENST00000557084 PCNTO95613 3336 aa15□□□□□ -0.01
SYNE2-226ENST00000557084 MED23Q9ULK4 1368 aa14.99□□□□□ -0.01
SYNE2-226ENST00000557084 USP17L3A6NCW0 530 aa14.99□□□□□ -0.01
SYNE2-226ENST00000557084 USP17L4A6NCW7 530 aa14.99□□□□□ -0.01
SYNE2-226ENST00000557084 PLIN1O60240 522 aa14.99□□□□□ -0.01
SYNE2-226ENST00000557084 USP17L1Q7RTZ2 530 aa14.99□□□□□ -0.01
SYNE2-226ENST00000557084 HELBQ8NG08 1087 aaPredicted RBP14.99□□□□□ -0.01
SYNE2-226ENST00000557084 KLRG1Q96E93 195 aa14.99□□□□□ -0.01
SYNE2-226ENST00000557084 ZNF594Q96JF6 807 aaPredicted RBP14.99□□□□□ -0.01
SYNE2-226ENST00000557084 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
SYNE2-226ENST00000557084 UTYO14607 1347 aa14.98□□□□□ -0.01
SYNE2-226ENST00000557084 KIF16BQ96L93 1317 aa14.98□□□□□ -0.01
SYNE2-226ENST00000557084 WTIPA6NIX2 430 aaPredicted RBP14.98□□□□□ -0.01
SYNE2-226ENST00000557084 TMEM88BA6NKF7 163 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms