RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 C17orf53Q8N3J3 647 aaPredicted RBP18.1■□□□□ 0.49
TMEM55B-207ENST00000557041 MPHOSPH8Q99549 860 aa18.1■□□□□ 0.49
TMEM55B-207ENST00000557041 EXOC5O00471 708 aa18.1■□□□□ 0.49
TMEM55B-207ENST00000557041 CCDC39Q9UFE4 941 aa18.1■□□□□ 0.49
TMEM55B-207ENST00000557041 SPATA31A3Q5VYP0 1347 aa18.1■□□□□ 0.49
TMEM55B-207ENST00000557041 VIRMAQ69YN4 1812 aaKnown RBP18.1■□□□□ 0.49
TMEM55B-207ENST00000557041 BECN2A8MW95 431 aa18.1■□□□□ 0.49
TMEM55B-207ENST00000557041 SDF4Q9BRK5 362 aa18.1■□□□□ 0.49
TMEM55B-207ENST00000557041 TRIM5Q9C035 493 aa18.1■□□□□ 0.49
TMEM55B-207ENST00000557041 A0A0G2JLW4 131 aa18.09■□□□□ 0.49
TMEM55B-207ENST00000557041 KBTBD3Q8NAB2 608 aa18.09■□□□□ 0.49
TMEM55B-207ENST00000557041 ERCC4Q92889 916 aaPredicted RBP18.09■□□□□ 0.49
TMEM55B-207ENST00000557041 KIF3AQ9Y496 699 aa18.09■□□□□ 0.49
TMEM55B-207ENST00000557041 CCDC192P0DO97 292 aa18.09■□□□□ 0.49
TMEM55B-207ENST00000557041 GPHNQ9NQX3 736 aaPredicted RBP18.09■□□□□ 0.49
TMEM55B-207ENST00000557041 ABCF2Q9UG63 623 aa18.09■□□□□ 0.49
TMEM55B-207ENST00000557041 XAGE2Q96GT9 111 aa18.08■□□□□ 0.48
TMEM55B-207ENST00000557041 GOLGA6L19H0YKK7 550 aa18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 ZAP70P43403 619 aa18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 KCNQ4P56696 695 aa18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 MAP3K11Q16584 847 aa18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 ATP2B3Q16720 1220 aa18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 LIG1P18858 919 aa18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 HSP90AA2PQ14568 343 aaPredicted RBP18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 LRRFIP1Q32MZ4 808 aaKnown RBP18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 SLC9C2Q5TAH2 1124 aa18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 CCDC73Q6ZRK6 1079 aa18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 FTOQ9C0B1 505 aaKnown RBP eCLIP18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 HMG20BQ9P0W2 317 aa18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 A0A087WWV3 80 aa18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 IMMTQ16891 758 aaKnown RBP18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 TTC6Q86TZ1 520 aa18.07■□□□□ 0.48
TMEM55B-207ENST00000557041 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
TMEM55B-207ENST00000557041 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.06■□□□□ 0.48
TMEM55B-207ENST00000557041 MTMR7Q9Y216 660 aa18.06■□□□□ 0.48
TMEM55B-207ENST00000557041 VPS37DQ86XT2 251 aa18.06■□□□□ 0.48
TMEM55B-207ENST00000557041 MEGF6O75095 1541 aa18.06■□□□□ 0.48
TMEM55B-207ENST00000557041 WDR17Q8IZU2 1322 aa18.06■□□□□ 0.48
TMEM55B-207ENST00000557041 GOLGA8BA8MQT2 603 aa18.06■□□□□ 0.48
TMEM55B-207ENST00000557041 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
TMEM55B-207ENST00000557041 ITGA6P23229 1130 aa18.06■□□□□ 0.48
TMEM55B-207ENST00000557041 ISM2Q6H9L7 571 aa18.06■□□□□ 0.48
TMEM55B-207ENST00000557041 ANKRD18BA2A2Z9 1011 aa18.05■□□□□ 0.48
TMEM55B-207ENST00000557041 ZNF213O14771 459 aa18.05■□□□□ 0.48
TMEM55B-207ENST00000557041 HLFQ16534 295 aa18.05■□□□□ 0.48
TMEM55B-207ENST00000557041 SLC4A8Q2Y0W8 1093 aa18.05■□□□□ 0.48
TMEM55B-207ENST00000557041 PIGBQ92521 554 aa18.05■□□□□ 0.48
TMEM55B-207ENST00000557041 AKAP2Q9Y2D5 859 aa18.05■□□□□ 0.48
TMEM55B-207ENST00000557041 SYNE3Q6ZMZ3 975 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 CLEC17AQ6ZS10 378 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 LUZP1Q86V48 1076 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 MICU3Q86XE3 530 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 CCDC24Q8N4L8 307 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 HAUS7Q99871 368 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 KLF18A0A0U1RQI7 1052 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 RNF113AO15541 343 aaKnown RBP18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 TM6SF1Q9BZW5 370 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 PTPDC1A2A3K4 754 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 TCIRG1Q13488 830 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 STK38Q15208 465 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 DHX32Q7L7V1 743 aaKnown RBP18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 DZIP3Q86Y13 1208 aaKnown RBP18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 SCAND2PQ9GZW5 306 aaPredicted RBP18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 GREM2Q9H772 168 aa18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 KDM6AO15550 1401 aaPredicted RBP18.04■□□□□ 0.48
TMEM55B-207ENST00000557041 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.03■□□□□ 0.48
TMEM55B-207ENST00000557041 ZNF592Q92610 1267 aa18.03■□□□□ 0.48
TMEM55B-207ENST00000557041 AIDAQ96BJ3 306 aa18.03■□□□□ 0.48
TMEM55B-207ENST00000557041 ZBTB1Q9Y2K1 713 aa18.03■□□□□ 0.48
TMEM55B-207ENST00000557041 HEG1Q9ULI3 1381 aa18.03■□□□□ 0.48
TMEM55B-207ENST00000557041 KINO60870 393 aaKnown RBP18.03■□□□□ 0.48
TMEM55B-207ENST00000557041 PIBF1Q8WXW3 757 aa18.03■□□□□ 0.48
TMEM55B-207ENST00000557041 HSPD1P10809 573 aaKnown RBP18.03■□□□□ 0.48
TMEM55B-207ENST00000557041 TOB2Q14106 344 aaPredicted RBP18.03■□□□□ 0.48
TMEM55B-207ENST00000557041 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.03■□□□□ 0.48
TMEM55B-207ENST00000557041 BIN1O00499 593 aa18.02■□□□□ 0.48
TMEM55B-207ENST00000557041 LETM1O95202 739 aaPredicted RBP18.02■□□□□ 0.48
TMEM55B-207ENST00000557041 NUP133Q8WUM0 1156 aa18.02■□□□□ 0.48
TMEM55B-207ENST00000557041 GJB4Q9NTQ9 266 aa18.02■□□□□ 0.48
TMEM55B-207ENST00000557041 ERVV-2B6SEH9 535 aa18.02■□□□□ 0.47
TMEM55B-207ENST00000557041 DNAJC25Q9H1X3 360 aa18.02■□□□□ 0.47
TMEM55B-207ENST00000557041 E7EWF7 191 aa18.01■□□□□ 0.47
TMEM55B-207ENST00000557041 FOXO4P98177 505 aa18.01■□□□□ 0.47
TMEM55B-207ENST00000557041 SCARF1Q14162 830 aa18.01■□□□□ 0.47
TMEM55B-207ENST00000557041 ANO6Q4KMQ2 910 aa18.01■□□□□ 0.47
TMEM55B-207ENST00000557041 OSBP2Q969R2 916 aa18.01■□□□□ 0.47
TMEM55B-207ENST00000557041 LRP2BPQ9P2M1 347 aa18.01■□□□□ 0.47
TMEM55B-207ENST00000557041 ORC3Q9UBD5 711 aaPredicted RBP18.01■□□□□ 0.47
TMEM55B-207ENST00000557041 RPAP1Q9BWH6 1393 aaPredicted RBP18.01■□□□□ 0.47
TMEM55B-207ENST00000557041 MINDY4BA8MYZ0 360 aa18.01■□□□□ 0.47
TMEM55B-207ENST00000557041 SCRN1Q12765 414 aa18.01■□□□□ 0.47
TMEM55B-207ENST00000557041 H7C1W4 665 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 ATP6V1AP38606 617 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 RFX5P48382 616 aaPredicted RBP18■□□□□ 0.47
TMEM55B-207ENST00000557041 FILIP1Q7Z7B0 1213 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 MIGA1Q8NAN2 632 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 MYL10Q9BUA6 226 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 PRC1O43663 620 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 C8orf76Q96K31 380 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 CTNNA3Q9UI47 895 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms